RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SCAPERQ9BY12 1400 aa19.34■□□□□ 0.69
TRAPPC4-209ENST00000528230 ARHGAP5Q13017 1502 aa19.33■□□□□ 0.68
TRAPPC4-209ENST00000528230 ZMYM4Q5VZL5 1548 aa19.32■□□□□ 0.68
TRAPPC4-209ENST00000528230 PREX2Q70Z35 1606 aa19.32■□□□□ 0.68
TRAPPC4-209ENST00000528230 MAGI2Q86UL8 1455 aa19.31■□□□□ 0.68
TRAPPC4-209ENST00000528230 CDC42BPAQ5VT25 1732 aa19.31■□□□□ 0.68
TRAPPC4-209ENST00000528230 MTUS2Q5JR59 1369 aa19.3■□□□□ 0.68
TRAPPC4-209ENST00000528230 POGZQ7Z3K3 1410 aa19.29■□□□□ 0.68
TRAPPC4-209ENST00000528230 VPS8Q8N3P4 1428 aa19.27■□□□□ 0.68
TRAPPC4-209ENST00000528230 ARHGEF40Q8TER5 1519 aa19.27■□□□□ 0.68
TRAPPC4-209ENST00000528230 PHF23Q9BUL5 403 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC4-209ENST00000528230 GPATCH8Q9UKJ3 1502 aaKnown RBP19.25■□□□□ 0.67
TRAPPC4-209ENST00000528230 ZFYVE16Q7Z3T8 1539 aa19.25■□□□□ 0.67
TRAPPC4-209ENST00000528230 EHBP1L1Q8N3D4 1523 aa19.25■□□□□ 0.67
TRAPPC4-209ENST00000528230 ZNF518AQ6AHZ1 1483 aa19.24■□□□□ 0.67
TRAPPC4-209ENST00000528230 CCNB3Q8WWL7 1395 aa19.22■□□□□ 0.67
TRAPPC4-209ENST00000528230 KDM5CP41229 1560 aa19.22■□□□□ 0.67
TRAPPC4-209ENST00000528230 ABCC1P33527 1531 aa19.21■□□□□ 0.67
TRAPPC4-209ENST00000528230 AFAP1Q8N556 730 aa19.21■□□□□ 0.67
TRAPPC4-209ENST00000528230 YEATS2Q9ULM3 1422 aa19.21■□□□□ 0.67
TRAPPC4-209ENST00000528230 TIAM1Q13009 1591 aa19.2■□□□□ 0.66
TRAPPC4-209ENST00000528230 ADAMTSL3P82987 1691 aa19.2■□□□□ 0.66
TRAPPC4-209ENST00000528230 ITSN2Q9NZM3 1697 aa19.2■□□□□ 0.66
TRAPPC4-209ENST00000528230 ARID4BQ4LE39 1312 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC4-209ENST00000528230 BCORL1Q5H9F3 1711 aa19.2■□□□□ 0.66
TRAPPC4-209ENST00000528230 CFDP1Q9UEE9 299 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC4-209ENST00000528230 ARHGEF12Q9NZN5 1544 aa19.19■□□□□ 0.66
TRAPPC4-209ENST00000528230 ATP10AO60312 1499 aa19.18■□□□□ 0.66
TRAPPC4-209ENST00000528230 MAP3K1Q13233 1512 aa19.18■□□□□ 0.66
TRAPPC4-209ENST00000528230 ZNF777Q9ULD5 760 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC4-209ENST00000528230 SAMD9LQ8IVG5 1584 aa19.17■□□□□ 0.66
TRAPPC4-209ENST00000528230 SUPT6HQ7KZ85 1726 aaKnown RBP19.17■□□□□ 0.66
TRAPPC4-209ENST00000528230 TRAPPC8Q9Y2L5 1435 aa19.17■□□□□ 0.66
TRAPPC4-209ENST00000528230 PLEKHH2Q8IVE3 1493 aa19.16■□□□□ 0.66
TRAPPC4-209ENST00000528230 MLH3Q9UHC1 1453 aa19.16■□□□□ 0.66
TRAPPC4-209ENST00000528230 HECW2Q9P2P5 1572 aa19.16■□□□□ 0.66
TRAPPC4-209ENST00000528230 KIAA1107Q9UPP5 1409 aa19.16■□□□□ 0.66
TRAPPC4-209ENST00000528230 C9orf84Q5VXU9 1444 aa19.14■□□□□ 0.65
TRAPPC4-209ENST00000528230 LRRC9Q6ZRR7 1453 aa19.13■□□□□ 0.65
TRAPPC4-209ENST00000528230 SIGLEC1Q9BZZ2 1709 aa19.12■□□□□ 0.65
TRAPPC4-209ENST00000528230 NCOA2Q15596 1464 aa19.12■□□□□ 0.65
TRAPPC4-209ENST00000528230 MYT1LQ9UL68 1186 aa19.12■□□□□ 0.65
TRAPPC4-209ENST00000528230 HNRNPMP52272 730 aaKnown RBP eCLIP19.11■□□□□ 0.65
TRAPPC4-209ENST00000528230 SYCP2Q9BX26 1530 aa19.1■□□□□ 0.65
TRAPPC4-209ENST00000528230 REREQ9P2R6 1566 aa19.1■□□□□ 0.65
TRAPPC4-209ENST00000528230 DIP2CQ9Y2E4 1556 aa19.1■□□□□ 0.65
TRAPPC4-209ENST00000528230 KIDINS220Q9ULH0 1771 aa19.09■□□□□ 0.65
TRAPPC4-209ENST00000528230 MADDQ8WXG6 1647 aa19.09■□□□□ 0.65
TRAPPC4-209ENST00000528230 PTPRMP28827 1452 aa19.09■□□□□ 0.65
TRAPPC4-209ENST00000528230 ABCA6Q8N139 1617 aa19.07■□□□□ 0.64
TRAPPC4-209ENST00000528230 APLP2Q06481 763 aa19.07■□□□□ 0.64
TRAPPC4-209ENST00000528230 SPAG9O60271 1321 aaKnown RBP19.06■□□□□ 0.64
TRAPPC4-209ENST00000528230 KANK4Q5T7N3 995 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC4-209ENST00000528230 ZNF644Q9H582 1327 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC4-209ENST00000528230 MBD5Q9P267 1494 aa19.04■□□□□ 0.64
TRAPPC4-209ENST00000528230 RSPH4AQ5TD94 716 aa19.04■□□□□ 0.64
TRAPPC4-209ENST00000528230 RIMS1Q86UR5 1692 aaKnown RBP19.04■□□□□ 0.64
TRAPPC4-209ENST00000528230 AGLP35573 1532 aa19.04■□□□□ 0.64
TRAPPC4-209ENST00000528230 MLECQ14165 292 aa19.03■□□□□ 0.64
TRAPPC4-209ENST00000528230 FER1L4A9Z1Z3 1794 aa19.02■□□□□ 0.64
TRAPPC4-209ENST00000528230 ATP7AQ04656 1500 aa19.01■□□□□ 0.63
TRAPPC4-209ENST00000528230 INO80Q9ULG1 1556 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC4-209ENST00000528230 CAMSAP2Q08AD1 1489 aa18.99■□□□□ 0.63
TRAPPC4-209ENST00000528230 RTEL1-TNFRSF6BF6WH68 1400 aa18.99■□□□□ 0.63
TRAPPC4-209ENST00000528230 MIA2Q96PC5 1412 aa18.98■□□□□ 0.63
TRAPPC4-209ENST00000528230 MYOM3Q5VTT5 1437 aa18.96■□□□□ 0.63
TRAPPC4-209ENST00000528230 ARHGEF5Q12774 1597 aa18.96■□□□□ 0.63
TRAPPC4-209ENST00000528230 CCDC141Q6ZP82 1450 aa18.96■□□□□ 0.63
TRAPPC4-209ENST00000528230 ADGBQ8N7X0 1667 aa18.95■□□□□ 0.62
TRAPPC4-209ENST00000528230 A2MP01023 1474 aa18.94■□□□□ 0.62
TRAPPC4-209ENST00000528230 PLXNC1O60486 1568 aa18.93■□□□□ 0.62
TRAPPC4-209ENST00000528230 TSPY4P0CV99 314 aa18.92■□□□□ 0.62
TRAPPC4-209ENST00000528230 TSPY10P0CW01 314 aa18.92■□□□□ 0.62
TRAPPC4-209ENST00000528230 ESF1Q9H501 851 aaKnown RBP18.9■□□□□ 0.62
TRAPPC4-209ENST00000528230 SETD1BQ9UPS6 1966 aaKnown RBP18.89■□□□□ 0.61
TRAPPC4-209ENST00000528230 DHX29Q7Z478 1369 aaKnown RBP18.88■□□□□ 0.61
TRAPPC4-209ENST00000528230 CNTLNQ9NXG0 1405 aa18.88■□□□□ 0.61
TRAPPC4-209ENST00000528230 PLPPR3Q6T4P5 718 aa18.87■□□□□ 0.61
TRAPPC4-209ENST00000528230 PPP6R1Q9UPN7 881 aa18.87■□□□□ 0.61
TRAPPC4-209ENST00000528230 MAST1Q9Y2H9 1570 aa18.86■□□□□ 0.61
TRAPPC4-209ENST00000528230 CEBPAP49715 358 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC4-209ENST00000528230 PTPN23Q9H3S7 1636 aa18.85■□□□□ 0.61
TRAPPC4-209ENST00000528230 LMTK3Q96Q04 1460 aa18.84■□□□□ 0.61
TRAPPC4-209ENST00000528230 MROH2AA6NES4 1674 aa18.84■□□□□ 0.61
TRAPPC4-209ENST00000528230 C3P01024 1663 aa18.84■□□□□ 0.61
TRAPPC4-209ENST00000528230 FGD6Q6ZV73 1430 aa18.83■□□□□ 0.6
TRAPPC4-209ENST00000528230 GGT6Q6P531 493 aa18.82■□□□□ 0.6
TRAPPC4-209ENST00000528230 TCOF1Q13428 1488 aaKnown RBP18.81■□□□□ 0.6
TRAPPC4-209ENST00000528230 PREX1Q8TCU6 1659 aa18.81■□□□□ 0.6
TRAPPC4-209ENST00000528230 ZMYM3Q14202 1370 aa18.79■□□□□ 0.6
TRAPPC4-209ENST00000528230 KIF3BO15066 747 aa18.78■□□□□ 0.6
TRAPPC4-209ENST00000528230 CLTCQ00610 1675 aaKnown RBP18.78■□□□□ 0.6
TRAPPC4-209ENST00000528230 SHANK2Q9UPX8 1470 aa18.77■□□□□ 0.6
TRAPPC4-209ENST00000528230 ABCC5O15440 1437 aa18.77■□□□□ 0.6
TRAPPC4-209ENST00000528230 DNMT1P26358 1616 aaKnown RBP18.77■□□□□ 0.6
TRAPPC4-209ENST00000528230 CROCC2H7BZ55 1655 aa18.76■□□□□ 0.59
TRAPPC4-209ENST00000528230 NPATQ14207 1427 aa18.75■□□□□ 0.59
TRAPPC4-209ENST00000528230 FAM135AQ9P2D6 1515 aa18.75■□□□□ 0.59
TRAPPC4-209ENST00000528230 DAPK1P53355 1430 aa18.74■□□□□ 0.59
TRAPPC4-209ENST00000528230 UHRF1BP1Q6BDS2 1440 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms