RNA–Protein interactions for RNA: ENST00000527891.5

ATM-213, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-213ENST00000527891 MYO5CQ9NQX4 1742 aa28.29■■■□□ 2.12
ATM-213ENST00000527891 KIF14Q15058 1648 aa28.29■■■□□ 2.12
ATM-213ENST00000527891 TROQ12816 1431 aaPredicted RBP28.28■■■□□ 2.12
ATM-213ENST00000527891 EFCAB2Q5VUJ9 269 aa28.27■■■□□ 2.12
ATM-213ENST00000527891 CLIP1P30622 1438 aa28.26■■■□□ 2.11
ATM-213ENST00000527891 RIMS1Q86UR5 1692 aaKnown RBP28.26■■■□□ 2.11
ATM-213ENST00000527891 SIGLEC1Q9BZZ2 1709 aa28.23■■■□□ 2.11
ATM-213ENST00000527891 PCF11O94913 1555 aaKnown RBP28.22■■■□□ 2.11
ATM-213ENST00000527891 LRRIQ1Q96JM4 1722 aa28.21■■■□□ 2.11
ATM-213ENST00000527891 ARHGAP5Q13017 1502 aa28.19■■■□□ 2.1
ATM-213ENST00000527891 LMTK3Q96Q04 1460 aa28.19■■■□□ 2.1
ATM-213ENST00000527891 CASKIN1Q8WXD9 1431 aa28.17■■■□□ 2.1
ATM-213ENST00000527891 ATP10AO60312 1499 aa28.16■■■□□ 2.1
ATM-213ENST00000527891 CCDC18Q5T9S5 1454 aa28.16■■■□□ 2.1
ATM-213ENST00000527891 ZNF518AQ6AHZ1 1483 aa28.16■■■□□ 2.1
ATM-213ENST00000527891 C9orf84Q5VXU9 1444 aa28.16■■■□□ 2.1
ATM-213ENST00000527891 MLECQ14165 292 aa28.15■■■□□ 2.1
ATM-213ENST00000527891 KDM5CP41229 1560 aa28.11■■■□□ 2.09
ATM-213ENST00000527891 PLPPR3Q6T4P5 718 aa28.11■■■□□ 2.09
ATM-213ENST00000527891 FER1L4A9Z1Z3 1794 aa28.09■■■□□ 2.09
ATM-213ENST00000527891 AFAP1Q8N556 730 aa28.08■■■□□ 2.09
ATM-213ENST00000527891 ARHGEF12Q9NZN5 1544 aa28.08■■■□□ 2.08
ATM-213ENST00000527891 CDC42BPBQ9Y5S2 1711 aa28.07■■■□□ 2.08
ATM-213ENST00000527891 PREX2Q70Z35 1606 aa28.07■■■□□ 2.08
ATM-213ENST00000527891 FYCO1Q9BQS8 1478 aa28.06■■■□□ 2.08
ATM-213ENST00000527891 MYT1LQ9UL68 1186 aa28.03■■■□□ 2.08
ATM-213ENST00000527891 ABCC1P33527 1531 aa28.02■■■□□ 2.08
ATM-213ENST00000527891 HSPA2P54652 639 aa28.01■■■□□ 2.07
ATM-213ENST00000527891 DIP2CQ9Y2E4 1556 aa28■■■□□ 2.07
ATM-213ENST00000527891 MLH3Q9UHC1 1453 aa28■■■□□ 2.07
ATM-213ENST00000527891 FBXO41Q8TF61 875 aa27.98■■■□□ 2.07
ATM-213ENST00000527891 TRAPPC8Q9Y2L5 1435 aa27.98■■■□□ 2.07
ATM-213ENST00000527891 REREQ9P2R6 1566 aa27.98■■■□□ 2.07
ATM-213ENST00000527891 ITSN2Q9NZM3 1697 aa27.96■■■□□ 2.07
ATM-213ENST00000527891 ABCA6Q8N139 1617 aa27.96■■■□□ 2.07
ATM-213ENST00000527891 CDC42BPAQ5VT25 1732 aa27.95■■■□□ 2.06
ATM-213ENST00000527891 CEBPAP49715 358 aaPredicted RBP27.9■■■□□ 2.06
ATM-213ENST00000527891 AGLP35573 1532 aa27.88■■■□□ 2.05
ATM-213ENST00000527891 PREX1Q8TCU6 1659 aa27.88■■■□□ 2.05
ATM-213ENST00000527891 GPATCH8Q9UKJ3 1502 aaKnown RBP27.87■■■□□ 2.05
ATM-213ENST00000527891 ZNF777Q9ULD5 760 aaPredicted RBP27.86■■■□□ 2.05
ATM-213ENST00000527891 KIDINS220Q9ULH0 1771 aa27.86■■■□□ 2.05
ATM-213ENST00000527891 SAMD9LQ8IVG5 1584 aa27.86■■■□□ 2.05
ATM-213ENST00000527891 SYCP2Q9BX26 1530 aa27.83■■■□□ 2.05
ATM-213ENST00000527891 UHRF1BP1Q6BDS2 1440 aa27.81■■■□□ 2.04
ATM-213ENST00000527891 ESF1Q9H501 851 aaKnown RBP27.8■■■□□ 2.04
ATM-213ENST00000527891 MTUS2Q5JR59 1369 aa27.79■■■□□ 2.04
ATM-213ENST00000527891 CCNB3Q8WWL7 1395 aa27.78■■■□□ 2.04
ATM-213ENST00000527891 CFDP1Q9UEE9 299 aaPredicted RBP27.78■■■□□ 2.04
ATM-213ENST00000527891 PLEKHH2Q8IVE3 1493 aa27.77■■■□□ 2.04
ATM-213ENST00000527891 KIAA1107Q9UPP5 1409 aa27.77■■■□□ 2.04
ATM-213ENST00000527891 SPAG9O60271 1321 aaKnown RBP27.77■■■□□ 2.04
ATM-213ENST00000527891 HNRNPMP52272 730 aaKnown RBP eCLIP27.77■■■□□ 2.046e-7■■■□□ 18.1
ATM-213ENST00000527891 C3P01024 1663 aa27.76■■■□□ 2.03
ATM-213ENST00000527891 CNTLNQ9NXG0 1405 aa27.75■■■□□ 2.03
ATM-213ENST00000527891 SETD1BQ9UPS6 1966 aaKnown RBP27.72■■■□□ 2.03
ATM-213ENST00000527891 ATP7AQ04656 1500 aa27.72■■■□□ 2.03
ATM-213ENST00000527891 EHBP1L1Q8N3D4 1523 aa27.7■■■□□ 2.02
ATM-213ENST00000527891 CEP162Q5TB80 1403 aa27.69■■■□□ 2.02
ATM-213ENST00000527891 CERKQ8TCT0 537 aa27.69■■■□□ 2.02
ATM-213ENST00000527891 INO80Q9ULG1 1556 aaPredicted RBP27.69■■■□□ 2.02
ATM-213ENST00000527891 DMRT2Q9Y5R5 561 aa27.68■■■□□ 2.02
ATM-213ENST00000527891 TIAM1Q13009 1591 aa27.67■■■□□ 2.02
ATM-213ENST00000527891 STRCQ7RTU9 1775 aa27.67■■■□□ 2.02
ATM-213ENST00000527891 PLXNC1O60486 1568 aa27.65■■■□□ 2.02
ATM-213ENST00000527891 A2MP01023 1474 aa27.64■■■□□ 2.02
ATM-213ENST00000527891 SUPT6HQ7KZ85 1726 aaKnown RBP27.64■■■□□ 2.02
ATM-213ENST00000527891 MROH2AA6NES4 1674 aa27.63■■■□□ 2.01
ATM-213ENST00000527891 ZNF644Q9H582 1327 aaPredicted RBP27.61■■■□□ 2.01
ATM-213ENST00000527891 NPATQ14207 1427 aa27.6■■■□□ 2.01
ATM-213ENST00000527891 ZMYM3Q14202 1370 aa27.6■■■□□ 2.01
ATM-213ENST00000527891 MBD5Q9P267 1494 aa27.58■■■□□ 2.01
ATM-213ENST00000527891 PTPRTO14522 1441 aa27.57■■■□□ 2
ATM-213ENST00000527891 ADGBQ8N7X0 1667 aa27.55■■■□□ 2
ATM-213ENST00000527891 CLTCQ00610 1675 aaKnown RBP27.54■■■□□ 2
ATM-213ENST00000527891 RTEL1-TNFRSF6BF6WH68 1400 aa27.53■■■□□ 2
ATM-213ENST00000527891 NCOA1Q15788 1441 aa27.53■■■□□ 2
ATM-213ENST00000527891 GGT6Q6P531 493 aa27.53■■■□□ 2
ATM-213ENST00000527891 NCOA2Q15596 1464 aa27.51■■■□□ 2
ATM-213ENST00000527891 PPP6R1Q9UPN7 881 aa27.49■■□□□ 1.99
ATM-213ENST00000527891 CAMSAP1Q5T5Y3 1602 aa27.47■■□□□ 1.99
ATM-213ENST00000527891 PTPRKQ15262 1439 aa27.47■■□□□ 1.99
ATM-213ENST00000527891 CAMSAP2Q08AD1 1489 aa27.46■■□□□ 1.99
ATM-213ENST00000527891 CCDC141Q6ZP82 1450 aa27.46■■□□□ 1.99
ATM-213ENST00000527891 DHX29Q7Z478 1369 aaKnown RBP27.46■■□□□ 1.99
ATM-213ENST00000527891 MYO3AQ8NEV4 1616 aa27.45■■□□□ 1.98
ATM-213ENST00000527891 RSPH4AQ5TD94 716 aa27.42■■□□□ 1.98
ATM-213ENST00000527891 ZNF142P52746 1687 aaPredicted RBP27.42■■□□□ 1.98
ATM-213ENST00000527891 VPS8Q8N3P4 1428 aa27.41■■□□□ 1.98
ATM-213ENST00000527891 CEP170BQ9Y4F5 1589 aaPredicted RBP27.4■■□□□ 1.98
ATM-213ENST00000527891 LTBP4Q8N2S1 1624 aa27.39■■□□□ 1.98
ATM-213ENST00000527891 PLA2R1Q13018 1463 aa27.38■■□□□ 1.97
ATM-213ENST00000527891 LOC105371045A0A1W2PR82 267 aa27.37■■□□□ 1.97
ATM-213ENST00000527891 LRRC9Q6ZRR7 1453 aa27.37■■□□□ 1.97
ATM-213ENST00000527891 ARHGEF5Q12774 1597 aa27.36■■□□□ 1.97
ATM-213ENST00000527891 KIF3BO15066 747 aa27.36■■□□□ 1.97
ATM-213ENST00000527891 NCKAP5LQ9HCH0 1330 aa27.36■■□□□ 1.97
ATM-213ENST00000527891 FAM135AQ9P2D6 1515 aa27.33■■□□□ 1.97
ATM-213ENST00000527891 PKD2Q13563 968 aa27.33■■□□□ 1.97
ATM-213ENST00000527891 IQSEC2Q5JU85 1478 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms