RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 PLCH2O75038 1416 aa31.07■■■□□ 2.56
CAPN1-211ENST00000527739 EFCAB2Q5VUJ9 269 aa31.06■■■□□ 2.56
CAPN1-211ENST00000527739 ZFYVE16Q7Z3T8 1539 aa31.03■■■□□ 2.56
CAPN1-211ENST00000527739 PCF11O94913 1555 aaKnown RBP31.02■■■□□ 2.56
CAPN1-211ENST00000527739 LMTK3Q96Q04 1460 aa31.01■■■□□ 2.55
CAPN1-211ENST00000527739 SCAPERQ9BY12 1400 aa31■■■□□ 2.55
CAPN1-211ENST00000527739 CCDC18Q5T9S5 1454 aa30.99■■■□□ 2.55
CAPN1-211ENST00000527739 POGZQ7Z3K3 1410 aa30.98■■■□□ 2.55
CAPN1-211ENST00000527739 KIF14Q15058 1648 aa30.97■■■□□ 2.55
CAPN1-211ENST00000527739 PLPPR3Q6T4P5 718 aa30.96■■■□□ 2.55
CAPN1-211ENST00000527739 MAGI2Q86UL8 1455 aa30.95■■■□□ 2.55
CAPN1-211ENST00000527739 FYCO1Q9BQS8 1478 aa30.95■■■□□ 2.54
CAPN1-211ENST00000527739 MLECQ14165 292 aa30.93■■■□□ 2.54
CAPN1-211ENST00000527739 LRRIQ1Q96JM4 1722 aa30.93■■■□□ 2.54
CAPN1-211ENST00000527739 MYO5CQ9NQX4 1742 aa30.92■■■□□ 2.54
CAPN1-211ENST00000527739 LOC105371045A0A1W2PR82 267 aa30.91■■■□□ 2.54
CAPN1-211ENST00000527739 ARHGAP5Q13017 1502 aa30.9■■■□□ 2.54
CAPN1-211ENST00000527739 MYT1LQ9UL68 1186 aa30.89■■■□□ 2.54
CAPN1-211ENST00000527739 HSPA2P54652 639 aa30.87■■■□□ 2.53
CAPN1-211ENST00000527739 FBXO41Q8TF61 875 aa30.87■■■□□ 2.53
CAPN1-211ENST00000527739 CEP162Q5TB80 1403 aa30.87■■■□□ 2.53
CAPN1-211ENST00000527739 ATP10AO60312 1499 aa30.84■■■□□ 2.53
CAPN1-211ENST00000527739 FER1L4A9Z1Z3 1794 aa30.84■■■□□ 2.53
CAPN1-211ENST00000527739 AFAP1Q8N556 730 aa30.83■■■□□ 2.53
CAPN1-211ENST00000527739 ZNF777Q9ULD5 760 aaPredicted RBP30.81■■■□□ 2.52
CAPN1-211ENST00000527739 C9orf84Q5VXU9 1444 aa30.8■■■□□ 2.52
CAPN1-211ENST00000527739 ARHGEF12Q9NZN5 1544 aa30.78■■■□□ 2.52
CAPN1-211ENST00000527739 MTUS2Q5JR59 1369 aa30.77■■■□□ 2.52
CAPN1-211ENST00000527739 ZNF518AQ6AHZ1 1483 aa30.76■■■□□ 2.51
CAPN1-211ENST00000527739 KDM5CP41229 1560 aa30.75■■■□□ 2.51
CAPN1-211ENST00000527739 CDC42BPBQ9Y5S2 1711 aa30.73■■■□□ 2.51
CAPN1-211ENST00000527739 CEBPAP49715 358 aaPredicted RBP30.7■■■□□ 2.51
CAPN1-211ENST00000527739 CFDP1Q9UEE9 299 aaPredicted RBP30.69■■■□□ 2.5
CAPN1-211ENST00000527739 CCNB3Q8WWL7 1395 aa30.68■■■□□ 2.5
CAPN1-211ENST00000527739 DIP2CQ9Y2E4 1556 aa30.68■■■□□ 2.5
CAPN1-211ENST00000527739 PREX2Q70Z35 1606 aa30.67■■■□□ 2.5
CAPN1-211ENST00000527739 TRAPPC8Q9Y2L5 1435 aa30.65■■■□□ 2.5
CAPN1-211ENST00000527739 GPATCH8Q9UKJ3 1502 aaKnown RBP30.64■■■□□ 2.5
CAPN1-211ENST00000527739 ABCA6Q8N139 1617 aa30.63■■■□□ 2.49
CAPN1-211ENST00000527739 HNRNPMP52272 730 aaKnown RBP eCLIP30.63■■■□□ 2.49
CAPN1-211ENST00000527739 ABCC1P33527 1531 aa30.62■■■□□ 2.49
CAPN1-211ENST00000527739 PREX1Q8TCU6 1659 aa30.61■■■□□ 2.49
CAPN1-211ENST00000527739 MLH3Q9UHC1 1453 aa30.6■■■□□ 2.49
CAPN1-211ENST00000527739 CDC42BPAQ5VT25 1732 aa30.59■■■□□ 2.49
CAPN1-211ENST00000527739 ITSN2Q9NZM3 1697 aa30.58■■■□□ 2.49
CAPN1-211ENST00000527739 REREQ9P2R6 1566 aa30.58■■■□□ 2.49
CAPN1-211ENST00000527739 SPAG9O60271 1321 aaKnown RBP30.53■■■□□ 2.48
CAPN1-211ENST00000527739 EHBP1L1Q8N3D4 1523 aa30.52■■■□□ 2.48
CAPN1-211ENST00000527739 VPS8Q8N3P4 1428 aa30.51■■■□□ 2.47
CAPN1-211ENST00000527739 CERKQ8TCT0 537 aa30.51■■■□□ 2.47
CAPN1-211ENST00000527739 KIDINS220Q9ULH0 1771 aa30.51■■■□□ 2.47
CAPN1-211ENST00000527739 ZNF644Q9H582 1327 aaPredicted RBP30.5■■■□□ 2.47
CAPN1-211ENST00000527739 SAMD9LQ8IVG5 1584 aa30.5■■■□□ 2.47
CAPN1-211ENST00000527739 SYCP2Q9BX26 1530 aa30.49■■■□□ 2.47
CAPN1-211ENST00000527739 AGLP35573 1532 aa30.48■■■□□ 2.47
CAPN1-211ENST00000527739 C3P01024 1663 aa30.48■■■□□ 2.47
CAPN1-211ENST00000527739 STRCQ7RTU9 1775 aa30.47■■■□□ 2.47
CAPN1-211ENST00000527739 PLEKHH2Q8IVE3 1493 aa30.47■■■□□ 2.47
CAPN1-211ENST00000527739 UHRF1BP1Q6BDS2 1440 aa30.47■■■□□ 2.47
CAPN1-211ENST00000527739 ESF1Q9H501 851 aaKnown RBP30.46■■■□□ 2.47
CAPN1-211ENST00000527739 KIAA1107Q9UPP5 1409 aa30.46■■■□□ 2.47
CAPN1-211ENST00000527739 TIAM1Q13009 1591 aa30.41■■■□□ 2.46
CAPN1-211ENST00000527739 NCOA2Q15596 1464 aa30.4■■■□□ 2.46
CAPN1-211ENST00000527739 SETD1BQ9UPS6 1966 aaKnown RBP30.39■■■□□ 2.46
CAPN1-211ENST00000527739 APLP2Q06481 763 aa30.36■■■□□ 2.45
CAPN1-211ENST00000527739 KANK4Q5T7N3 995 aaPredicted RBP30.36■■■□□ 2.45
CAPN1-211ENST00000527739 LRRC9Q6ZRR7 1453 aa30.33■■■□□ 2.45
CAPN1-211ENST00000527739 SUPT6HQ7KZ85 1726 aaKnown RBP30.33■■■□□ 2.45
CAPN1-211ENST00000527739 DMRT2Q9Y5R5 561 aa30.32■■■□□ 2.44
CAPN1-211ENST00000527739 ATP7AQ04656 1500 aa30.31■■■□□ 2.44
CAPN1-211ENST00000527739 CNTLNQ9NXG0 1405 aa30.3■■■□□ 2.44
CAPN1-211ENST00000527739 MBD5Q9P267 1494 aa30.28■■■□□ 2.44
CAPN1-211ENST00000527739 GGT6Q6P531 493 aa30.27■■■□□ 2.44
CAPN1-211ENST00000527739 INO80Q9ULG1 1556 aaPredicted RBP30.27■■■□□ 2.44
CAPN1-211ENST00000527739 RSPH4AQ5TD94 716 aa30.26■■■□□ 2.43
CAPN1-211ENST00000527739 A2MP01023 1474 aa30.25■■■□□ 2.43
CAPN1-211ENST00000527739 PTPRTO14522 1441 aa30.25■■■□□ 2.43
CAPN1-211ENST00000527739 CAMSAP2Q08AD1 1489 aa30.24■■■□□ 2.43
CAPN1-211ENST00000527739 PLXNC1O60486 1568 aa30.24■■■□□ 2.43
CAPN1-211ENST00000527739 MROH2AA6NES4 1674 aa30.23■■■□□ 2.43
CAPN1-211ENST00000527739 ZMYM3Q14202 1370 aa30.23■■■□□ 2.43
CAPN1-211ENST00000527739 TSPY4P0CV99 314 aa30.22■■■□□ 2.43
CAPN1-211ENST00000527739 TSPY10P0CW01 314 aa30.22■■■□□ 2.43
CAPN1-211ENST00000527739 MAP3K1Q13233 1512 aa30.22■■■□□ 2.43
CAPN1-211ENST00000527739 NCOA1Q15788 1441 aa30.21■■■□□ 2.43
CAPN1-211ENST00000527739 CLTCQ00610 1675 aaKnown RBP30.2■■■□□ 2.42
CAPN1-211ENST00000527739 RTEL1-TNFRSF6BF6WH68 1400 aa30.19■■■□□ 2.42
CAPN1-211ENST00000527739 NPATQ14207 1427 aa30.19■■■□□ 2.42
CAPN1-211ENST00000527739 CCDC141Q6ZP82 1450 aa30.19■■■□□ 2.42
CAPN1-211ENST00000527739 CAMSAP1Q5T5Y3 1602 aa30.15■■■□□ 2.42
CAPN1-211ENST00000527739 LTBP4Q8N2S1 1624 aa30.15■■■□□ 2.42
CAPN1-211ENST00000527739 DHX29Q7Z478 1369 aaKnown RBP30.14■■■□□ 2.41
CAPN1-211ENST00000527739 KIF3BO15066 747 aa30.12■■■□□ 2.41
CAPN1-211ENST00000527739 MYOM3Q5VTT5 1437 aa30.11■■■□□ 2.41
CAPN1-211ENST00000527739 PTPRKQ15262 1439 aa30.1■■■□□ 2.41
CAPN1-211ENST00000527739 ADGBQ8N7X0 1667 aa30.1■■■□□ 2.41
CAPN1-211ENST00000527739 NCKAP5LQ9HCH0 1330 aa30.09■■■□□ 2.41
CAPN1-211ENST00000527739 MYO3AQ8NEV4 1616 aa30.08■■■□□ 2.41
CAPN1-211ENST00000527739 PPP6R1Q9UPN7 881 aa30.07■■■□□ 2.4
CAPN1-211ENST00000527739 MIA2Q96PC5 1412 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms