RNA–Protein interactions for RNA: ENST00000527537.5

RDX-203, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-203ENST00000527537 POGKQ9P215 609 aa8.79□□□□□ -1
RDX-203ENST00000527537 CFTRP13569 1480 aa8.79□□□□□ -1
RDX-203ENST00000527537 FAM50AQ14320 339 aaKnown RBP8.79□□□□□ -1
RDX-203ENST00000527537 MRS2Q9HD23 443 aa8.77□□□□□ -1
RDX-203ENST00000527537 ARID4BQ4LE39 1312 aaPredicted RBP8.77□□□□□ -1.01
RDX-203ENST00000527537 IGF1RP08069 1367 aa8.76□□□□□ -1.01
RDX-203ENST00000527537 SETD5Q9C0A6 1442 aa8.76□□□□□ -1.01
RDX-203ENST00000527537 XRCC6P12956 609 aaKnown RBP eCLIP8.76□□□□□ -1.01
RDX-203ENST00000527537 STAC3Q96MF2 364 aa8.76□□□□□ -1.01
RDX-203ENST00000527537 CHMP4BQ9H444 224 aaKnown RBP8.76□□□□□ -1.01
RDX-203ENST00000527537 CARMIL1Q5VZK9 1371 aa8.75□□□□□ -1.01
RDX-203ENST00000527537 PRKRIP1Q9H875 184 aaPredicted RBP8.75□□□□□ -1.01
RDX-203ENST00000527537 CANXP27824 592 aaKnown RBP8.75□□□□□ -1.01
RDX-203ENST00000527537 SMAP1Q8IYB5 467 aaPredicted RBP8.74□□□□□ -1.01
RDX-203ENST00000527537 IPO4Q8TEX9 1081 aaKnown RBP8.74□□□□□ -1.01
RDX-203ENST00000527537 CNTLNQ9NXG0 1405 aa8.73□□□□□ -1.01
RDX-203ENST00000527537 FHAD1B1AJZ9 1412 aa8.73□□□□□ -1.01
RDX-203ENST00000527537 NCOA2Q15596 1464 aa8.73□□□□□ -1.01
RDX-203ENST00000527537 FGD5Q6ZNL6 1462 aa8.73□□□□□ -1.01
RDX-203ENST00000527537 FSD2A1L4K1 749 aa8.73□□□□□ -1.01
RDX-203ENST00000527537 ESPNB1AK53 854 aa8.73□□□□□ -1.01
RDX-203ENST00000527537 KLHL34Q8N239 644 aa8.73□□□□□ -1.01
RDX-203ENST00000527537 EXOC6Q8TAG9 804 aa8.73□□□□□ -1.01
RDX-203ENST00000527537 CADPSQ9ULU8 1353 aa8.72□□□□□ -1.01
RDX-203ENST00000527537 GOLGA6L3A6NEY3 463 aa8.72□□□□□ -1.01
RDX-203ENST00000527537 PAXIP1Q6ZW49 1069 aaPredicted RBP8.72□□□□□ -1.01
RDX-203ENST00000527537 PANK2Q9BZ23 570 aa8.72□□□□□ -1.01
RDX-203ENST00000527537 RSPH4AQ5TD94 716 aa8.71□□□□□ -1.01
RDX-203ENST00000527537 MAP7D2Q96T17 732 aa8.71□□□□□ -1.01
RDX-203ENST00000527537 PHLDB1Q86UU1 1377 aa8.71□□□□□ -1.01
RDX-203ENST00000527537 ZHX1Q9UKY1 873 aaPredicted RBP8.71□□□□□ -1.01
RDX-203ENST00000527537 CNGB1Q14028 1251 aaPredicted RBP8.71□□□□□ -1.02
RDX-203ENST00000527537 TONSLQ96HA7 1378 aa8.71□□□□□ -1.02
RDX-203ENST00000527537 ERBB4Q15303 1308 aa8.7□□□□□ -1.02
RDX-203ENST00000527537 NCLP19338 710 aaKnown RBP8.7□□□□□ -1.02
RDX-203ENST00000527537 ZNF326Q5BKZ1 582 aaKnown RBP8.7□□□□□ -1.02
RDX-203ENST00000527537 TIAM1Q13009 1591 aa8.7□□□□□ -1.02
RDX-203ENST00000527537 RRP1P56182 461 aaKnown RBP8.69□□□□□ -1.02
RDX-203ENST00000527537 KIAA1211Q6ZU35 1233 aa8.69□□□□□ -1.02
RDX-203ENST00000527537 FHOD3Q2V2M9 1422 aa8.69□□□□□ -1.02
RDX-203ENST00000527537 LRRC9Q6ZRR7 1453 aa8.69□□□□□ -1.02
RDX-203ENST00000527537 UTP14CQ5TAP6 766 aaKnown RBP8.68□□□□□ -1.02
RDX-203ENST00000527537 ARXQ96QS3 562 aa8.68□□□□□ -1.02
RDX-203ENST00000527537 RIPK4P57078 832 aa8.67□□□□□ -1.02
RDX-203ENST00000527537 RAD54L2Q9Y4B4 1467 aa8.67□□□□□ -1.02
RDX-203ENST00000527537 SKAP1Q86WV1 359 aa8.67□□□□□ -1.02
RDX-203ENST00000527537 DMTNQ08495 405 aa8.66□□□□□ -1.02
RDX-203ENST00000527537 HSPA5P11021 654 aaKnown RBP8.66□□□□□ -1.02
RDX-203ENST00000527537 MRE11P49959 708 aa8.66□□□□□ -1.02
RDX-203ENST00000527537 TERF1P54274 439 aa8.66□□□□□ -1.02
RDX-203ENST00000527537 MYH16Q9H6N6 1097 aa8.66□□□□□ -1.02
RDX-203ENST00000527537 TMEM51Q9NW97 253 aa8.66□□□□□ -1.02
RDX-203ENST00000527537 PRDM2Q13029 1718 aa8.65□□□□□ -1.02
RDX-203ENST00000527537 FANCD2Q9BXW9 1451 aa8.65□□□□□ -1.02
RDX-203ENST00000527537 PCF11O94913 1555 aaKnown RBP8.65□□□□□ -1.02
RDX-203ENST00000527537 FAM161AQ3B820 660 aa8.65□□□□□ -1.03
RDX-203ENST00000527537 C8orf34Q49A92 452 aa8.64□□□□□ -1.03
RDX-203ENST00000527537 FAM13BQ9NYF5 915 aa8.64□□□□□ -1.03
RDX-203ENST00000527537 PPP4R3BQ5MIZ7 849 aa8.64□□□□□ -1.03
RDX-203ENST00000527537 TRIM44Q96DX7 344 aaPredicted RBP8.63□□□□□ -1.03
RDX-203ENST00000527537 PRDM10Q9NQV6 1147 aa8.63□□□□□ -1.03
RDX-203ENST00000527537 KDM5BQ9UGL1 1544 aa8.63□□□□□ -1.03
RDX-203ENST00000527537 FOXD1Q16676 465 aa8.63□□□□□ -1.03
RDX-203ENST00000527537 MTERF4Q7Z6M4 381 aaKnown RBP8.63□□□□□ -1.03
RDX-203ENST00000527537 NESP48681 1621 aa8.63□□□□□ -1.03
RDX-203ENST00000527537 CC2D2AQ9P2K1 1620 aa8.63□□□□□ -1.03
RDX-203ENST00000527537 OFD1O75665 1012 aa8.62□□□□□ -1.03
RDX-203ENST00000527537 ZSCAN20P17040 1043 aaPredicted RBP8.62□□□□□ -1.03
RDX-203ENST00000527537 ZNF830Q96NB3 372 aaPredicted RBP8.62□□□□□ -1.03
RDX-203ENST00000527537 RCAN3Q9UKA8 241 aa8.62□□□□□ -1.03
RDX-203ENST00000527537 CCDC7Q96M83 1385 aa8.62□□□□□ -1.03
RDX-203ENST00000527537 MAP3K1Q13233 1512 aa8.62□□□□□ -1.03
RDX-203ENST00000527537 GRPEL1Q9HAV7 217 aa8.61□□□□□ -1.03
RDX-203ENST00000527537 NCOA1Q15788 1441 aa8.61□□□□□ -1.03
RDX-203ENST00000527537 EIF4G2P78344 907 aaKnown RBP eCLIP8.61□□□□□ -1.031e-35■■■■■ 36.1
RDX-203ENST00000527537 GZF1Q9H116 711 aaPredicted RBP8.61□□□□□ -1.03
RDX-203ENST00000527537 FTSJ3Q8IY81 847 aaKnown RBP8.6□□□□□ -1.03
RDX-203ENST00000527537 ANTXR1Q9H6X2 564 aa8.6□□□□□ -1.03
RDX-203ENST00000527537 MTUS2Q5JR59 1369 aa8.6□□□□□ -1.03
RDX-203ENST00000527537 KTN1Q86UP2 1357 aaKnown RBP8.6□□□□□ -1.03
RDX-203ENST00000527537 POLA1P09884 1462 aaPredicted RBP8.6□□□□□ -1.03
RDX-203ENST00000527537 KIF20AO95235 890 aa8.6□□□□□ -1.03
RDX-203ENST00000527537 TNNT2P45379 298 aaPredicted RBP8.6□□□□□ -1.03
RDX-203ENST00000527537 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.6□□□□□ -1.03
RDX-203ENST00000527537 PLCD3Q8N3E9 789 aa8.6□□□□□ -1.03
RDX-203ENST00000527537 SLKQ9H2G2 1235 aaPredicted RBP8.6□□□□□ -1.03
RDX-203ENST00000527537 ISY1Q9ULR0 285 aaKnown RBP8.59□□□□□ -1.03
RDX-203ENST00000527537 CFAP43Q8NDM7 1665 aa8.59□□□□□ -1.03
RDX-203ENST00000527537 TDRD9Q8NDG6 1382 aaKnown RBP8.59□□□□□ -1.03
RDX-203ENST00000527537 ANP32BQ92688 251 aaKnown RBP8.59□□□□□ -1.03
RDX-203ENST00000527537 SENP3-EIF4A1A0A087X0R7 540 aa8.58□□□□□ -1.04
RDX-203ENST00000527537 ARID3CA6NKF2 412 aa8.58□□□□□ -1.04
RDX-203ENST00000527537 VGLL3A8MV65 326 aa8.58□□□□□ -1.04
RDX-203ENST00000527537 TOPBP1Q92547 1522 aa8.58□□□□□ -1.04
RDX-203ENST00000527537 KDM2BQ8NHM5 1336 aa8.58□□□□□ -1.04
RDX-203ENST00000527537 BECN1Q14457 450 aa8.58□□□□□ -1.04
RDX-203ENST00000527537 FYCO1Q9BQS8 1478 aa8.57□□□□□ -1.04
RDX-203ENST00000527537 DNMBPQ6XZF7 1577 aa8.57□□□□□ -1.04
RDX-203ENST00000527537 CASKIN1Q8WXD9 1431 aa8.57□□□□□ -1.04
RDX-203ENST00000527537 ABCA5Q8WWZ7 1642 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms