RNA–Protein interactions for RNA: ENST00000527389.2

ATM-211, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-211ENST00000527389 TMEM92Q6UXU6 159 aa14.24□□□□□ -0.13
ATM-211ENST00000527389 OTUD5Q96G74 571 aa14.23□□□□□ -0.13
ATM-211ENST00000527389 CRISPLD2Q9H0B8 497 aa14.23□□□□□ -0.13
ATM-211ENST00000527389 KIF3CO14782 793 aa14.22□□□□□ -0.13
ATM-211ENST00000527389 NCKAP5LQ9HCH0 1330 aa14.21□□□□□ -0.13
ATM-211ENST00000527389 GPHNQ9NQX3 736 aaPredicted RBP14.19□□□□□ -0.14
ATM-211ENST00000527389 PDE4AP27815 886 aa14.18□□□□□ -0.14
ATM-211ENST00000527389 C2orf72A6NCS6 295 aa14.16□□□□□ -0.14
ATM-211ENST00000527389 TMC2Q8TDI7 906 aa14.16□□□□□ -0.14
ATM-211ENST00000527389 MFSD10Q14728 455 aa14.15□□□□□ -0.14
ATM-211ENST00000527389 SLAIN1Q8ND83 568 aa14.15□□□□□ -0.14
ATM-211ENST00000527389 SLC24A1O60721 1099 aa14.12□□□□□ -0.15
ATM-211ENST00000527389 VSIG10Q8N0Z9 540 aa14.12□□□□□ -0.15
ATM-211ENST00000527389 FOXK1P85037 733 aa14.11□□□□□ -0.15
ATM-211ENST00000527389 LARP6Q9BRS8 491 aaKnown RBP14.11□□□□□ -0.15
ATM-211ENST00000527389 DDX27Q96GQ7 796 aaKnown RBP14.09□□□□□ -0.15
ATM-211ENST00000527389 DSG2Q14126 1118 aa14.08□□□□□ -0.16
ATM-211ENST00000527389 KDM2AQ9Y2K7 1162 aa14.07□□□□□ -0.16
ATM-211ENST00000527389 PPP1R15BQ5SWA1 713 aa14.06□□□□□ -0.16
ATM-211ENST00000527389 PLPP6Q8IY26 295 aa14.03□□□□□ -0.16
ATM-211ENST00000527389 WDR70Q9NW82 654 aa14.01□□□□□ -0.17
ATM-211ENST00000527389 CAMK2BQ13554 666 aa13.99□□□□□ -0.17
ATM-211ENST00000527389 SNPHO15079 494 aa13.96□□□□□ -0.17
ATM-211ENST00000527389 HOXB3P14651 431 aaPredicted RBP13.96□□□□□ -0.17
ATM-211ENST00000527389 SLC34A2O95436 690 aa13.95□□□□□ -0.18
ATM-211ENST00000527389 E2F4Q16254 413 aa13.93□□□□□ -0.18
ATM-211ENST00000527389 DOK7Q18PE1 504 aa13.92□□□□□ -0.18
ATM-211ENST00000527389 PTCD2Q8WV60 388 aaKnown RBP13.89□□□□□ -0.19
ATM-211ENST00000527389 EMILIN3Q9NT22 766 aa13.89□□□□□ -0.19
ATM-211ENST00000527389 P3H3Q8IVL6 736 aa13.88□□□□□ -0.19
ATM-211ENST00000527389 OXER1Q8TDS5 423 aa13.88□□□□□ -0.19
ATM-211ENST00000527389 ZSWIM6Q9HCJ5 1215 aa13.88□□□□□ -0.19
ATM-211ENST00000527389 ARIH1Q9Y4X5 557 aaPredicted RBP13.87□□□□□ -0.19
ATM-211ENST00000527389 KCNV2Q8TDN2 545 aa13.86□□□□□ -0.19
ATM-211ENST00000527389 RIMBP2O15034 1052 aa13.85□□□□□ -0.19
ATM-211ENST00000527389 ZNF710Q8N1W2 664 aa13.82□□□□□ -0.2
ATM-211ENST00000527389 ARHGEF1Q92888 912 aaKnown RBP13.81□□□□□ -0.2
ATM-211ENST00000527389 UPF1Q92900 1129 aaKnown RBP eCLIP13.81□□□□□ -0.2
ATM-211ENST00000527389 PCDHGA4Q9Y5G9 962 aa13.81□□□□□ -0.2
ATM-211ENST00000527389 GPR153Q6NV75 609 aa13.8□□□□□ -0.2
ATM-211ENST00000527389 TBC1D12O60347 775 aa13.79□□□□□ -0.2
ATM-211ENST00000527389 DPYSL4O14531 572 aa13.77□□□□□ -0.21
ATM-211ENST00000527389 HOXB1P14653 301 aaPredicted RBP13.77□□□□□ -0.21
ATM-211ENST00000527389 ST18O60284 1047 aa13.76□□□□□ -0.21
ATM-211ENST00000527389 KDM4FA0A1W2PPD8 638 aa13.75□□□□□ -0.21
ATM-211ENST00000527389 MAP3K9P80192 1104 aa13.75□□□□□ -0.21
ATM-211ENST00000527389 ARSIQ5FYB1 569 aa13.75□□□□□ -0.21
ATM-211ENST00000527389 LCE2DQ5TA82 110 aaPredicted RBP13.74□□□□□ -0.21
ATM-211ENST00000527389 PDIA6Q15084 440 aa13.73□□□□□ -0.21
ATM-211ENST00000527389 FAM163AQ96GL9 167 aaPredicted RBP13.72□□□□□ -0.21
ATM-211ENST00000527389 KHSRPQ92945 711 aaKnown RBP eCLIP13.71□□□□□ -0.21
ATM-211ENST00000527389 SPDYE16A6NNV3 312 aaPredicted RBP13.7□□□□□ -0.22
ATM-211ENST00000527389 EVI5O60447 810 aa13.69□□□□□ -0.22
ATM-211ENST00000527389 ANO8Q9HCE9 1232 aaPredicted RBP13.69□□□□□ -0.22
ATM-211ENST00000527389 NUDT7P0C024 238 aa13.68□□□□□ -0.22
ATM-211ENST00000527389 ZNF316A6NFI3 1004 aaPredicted RBP13.66□□□□□ -0.22
ATM-211ENST00000527389 PTGER2P43116 358 aa13.62□□□□□ -0.23
ATM-211ENST00000527389 EMP3P54852 163 aa13.59□□□□□ -0.23
ATM-211ENST00000527389 MARVELD3Q96A59 401 aa13.59□□□□□ -0.23
ATM-211ENST00000527389 LHX6Q9UPM6 363 aa13.59□□□□□ -0.23
ATM-211ENST00000527389 PSDA5PKW4 1024 aaPredicted RBP13.56□□□□□ -0.24
ATM-211ENST00000527389 SEMA3EO15041 775 aa13.56□□□□□ -0.24
ATM-211ENST00000527389 JPH4Q96JJ6 628 aa13.55□□□□□ -0.24
ATM-211ENST00000527389 TESPA1A2RU30 521 aaPredicted RBP13.54□□□□□ -0.24
ATM-211ENST00000527389 FOSBP53539 338 aa13.54□□□□□ -0.24
ATM-211ENST00000527389 PHF14O94880 888 aa13.53□□□□□ -0.24
ATM-211ENST00000527389 NBR1Q14596 966 aa13.53□□□□□ -0.24
ATM-211ENST00000527389 ERBB3P21860 1342 aa13.53□□□□□ -0.24
ATM-211ENST00000527389 FAM205CA6NFA0 338 aa13.5□□□□□ -0.25
ATM-211ENST00000527389 MLLT3P42568 568 aaPredicted RBP13.5□□□□□ -0.25
ATM-211ENST00000527389 DDX12PQ92771 950 aa13.5□□□□□ -0.25
ATM-211ENST00000527389 PCDHGA10Q9Y5H3 936 aa13.5□□□□□ -0.25
ATM-211ENST00000527389 VARS2Q5ST30 1063 aaKnown RBP13.49□□□□□ -0.25
ATM-211ENST00000527389 HS3ST6Q96QI5 342 aa13.49□□□□□ -0.25
ATM-211ENST00000527389 PPP4R3BQ5MIZ7 849 aa13.48□□□□□ -0.25
ATM-211ENST00000527389 ZNF454Q8N9F8 522 aa13.48□□□□□ -0.25
ATM-211ENST00000527389 BCANQ96GW7 911 aa13.48□□□□□ -0.25
ATM-211ENST00000527389 EPAS1Q99814 870 aa13.48□□□□□ -0.25
ATM-211ENST00000527389 POTEB3A0JP26 581 aa13.47□□□□□ -0.25
ATM-211ENST00000527389 POTEBQ6S5H4 581 aa13.47□□□□□ -0.25
ATM-211ENST00000527389 GRXCR2A6NFK2 248 aa13.46□□□□□ -0.25
ATM-211ENST00000527389 TYW1BQ6NUM6 668 aa13.46□□□□□ -0.25
ATM-211ENST00000527389 FBXW7Q969H0 707 aa13.46□□□□□ -0.25
ATM-211ENST00000527389 OSBPP22059 807 aa13.45□□□□□ -0.26
ATM-211ENST00000527389 SMYD5Q6GMV2 418 aa13.44□□□□□ -0.26
ATM-211ENST00000527389 ZDHHC16Q969W1 377 aa13.44□□□□□ -0.26
ATM-211ENST00000527389 POTEMA6NI47 508 aa13.43□□□□□ -0.26
ATM-211ENST00000527389 POTEGQ6S5H5 508 aa13.43□□□□□ -0.26
ATM-211ENST00000527389 EN1Q05925 392 aaPredicted RBP13.42□□□□□ -0.26
ATM-211ENST00000527389 ZNF687Q8N1G0 1237 aa13.42□□□□□ -0.26
ATM-211ENST00000527389 BCL2L12Q9HB09 334 aa13.41□□□□□ -0.26
ATM-211ENST00000527389 PRIM1P49642 420 aaKnown RBP13.4□□□□□ -0.26
ATM-211ENST00000527389 ADAM33Q9BZ11 813 aa13.4□□□□□ -0.26
ATM-211ENST00000527389 TULP1O00294 542 aaPredicted RBP13.36□□□□□ -0.27
ATM-211ENST00000527389 PBX2P40425 430 aa13.36□□□□□ -0.27
ATM-211ENST00000527389 POTEEQ6S8J3 1075 aa13.36□□□□□ -0.27
ATM-211ENST00000527389 MAP3K7O43318 606 aa13.33□□□□□ -0.28
ATM-211ENST00000527389 C6orf132Q5T0Z8 1188 aa13.33□□□□□ -0.28
ATM-211ENST00000527389 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.33□□□□□ -0.28
ATM-211ENST00000527389 PTPREP23469 700 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms