RNA–Protein interactions for RNA: ENST00000526938.5

CTNND1-215, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-215ENST00000526938 SAMD9Q5K651 1589 aa12.09□□□□□ -0.47
CTNND1-215ENST00000526938 EIF4G2P78344 907 aaKnown RBP eCLIP12.08□□□□□ -0.48
CTNND1-215ENST00000526938 HSPA5P11021 654 aaKnown RBP12.07□□□□□ -0.48
CTNND1-215ENST00000526938 PBRM1Q86U86 1689 aa12.07□□□□□ -0.48
CTNND1-215ENST00000526938 HECW1Q76N89 1606 aa12.07□□□□□ -0.48
CTNND1-215ENST00000526938 DISP1Q96F81 1524 aa12.07□□□□□ -0.48
CTNND1-215ENST00000526938 BCANQ96GW7 911 aa12.07□□□□□ -0.48
CTNND1-215ENST00000526938 SUPT6HQ7KZ85 1726 aaKnown RBP12.07□□□□□ -0.48
CTNND1-215ENST00000526938 EIF4G3O43432 1585 aaKnown RBP12.06□□□□□ -0.48
CTNND1-215ENST00000526938 NUP153P49790 1475 aaKnown RBP12.06□□□□□ -0.48
CTNND1-215ENST00000526938 RGL3Q3MIN7 710 aa12.05□□□□□ -0.48
CTNND1-215ENST00000526938 MAGI1Q96QZ7 1491 aaPredicted RBP12.05□□□□□ -0.48
CTNND1-215ENST00000526938 PTPN23Q9H3S7 1636 aa12.04□□□□□ -0.48
CTNND1-215ENST00000526938 UGGT2Q9NYU1 1516 aa12.04□□□□□ -0.48
CTNND1-215ENST00000526938 TROQ12816 1431 aaPredicted RBP12.03□□□□□ -0.48
CTNND1-215ENST00000526938 MIA2Q96PC5 1412 aa12.03□□□□□ -0.48
CTNND1-215ENST00000526938 NUP155O75694 1391 aa12.02□□□□□ -0.49
CTNND1-215ENST00000526938 ABCC5O15440 1437 aa12.01□□□□□ -0.49
CTNND1-215ENST00000526938 DAPK1P53355 1430 aa12.01□□□□□ -0.49
CTNND1-215ENST00000526938 SENP3-EIF4A1A0A087X0R7 540 aa12.01□□□□□ -0.49
CTNND1-215ENST00000526938 ANKRD30AQ9BXX3 1397 aa12□□□□□ -0.49
CTNND1-215ENST00000526938 KIAA0556O60303 1618 aa11.99□□□□□ -0.49
CTNND1-215ENST00000526938 NBPF8Q3BBV2 869 aa11.99□□□□□ -0.49
CTNND1-215ENST00000526938 FAM9BQ8IZU0 186 aa11.98□□□□□ -0.49
CTNND1-215ENST00000526938 HNRNPUQ00839 825 aaKnown RBP eCLIP11.98□□□□□ -0.49
CTNND1-215ENST00000526938 CEP170Q5SW79 1584 aa11.97□□□□□ -0.49
CTNND1-215ENST00000526938 DCAF11Q8TEB1 546 aa11.97□□□□□ -0.49
CTNND1-215ENST00000526938 NEFLP07196 543 aa11.96□□□□□ -0.49
CTNND1-215ENST00000526938 ARHGEF11O15085 1522 aa11.96□□□□□ -0.49
CTNND1-215ENST00000526938 ATP10BO94823 1461 aa11.95□□□□□ -0.5
CTNND1-215ENST00000526938 NUP160Q12769 1436 aa11.95□□□□□ -0.5
CTNND1-215ENST00000526938 GPATCH8Q9UKJ3 1502 aaKnown RBP11.95□□□□□ -0.5
CTNND1-215ENST00000526938 RAPGEF6Q8TEU7 1601 aa11.94□□□□□ -0.5
CTNND1-215ENST00000526938 BCL11AQ9H165 835 aa11.94□□□□□ -0.5
CTNND1-215ENST00000526938 LRRIQ1Q96JM4 1722 aa11.94□□□□□ -0.5
CTNND1-215ENST00000526938 FKBP8Q14318 412 aa11.94□□□□□ -0.5
CTNND1-215ENST00000526938 CARD11Q9BXL7 1154 aa11.94□□□□□ -0.5
CTNND1-215ENST00000526938 WASHC2AQ641Q2 1341 aa11.93□□□□□ -0.5
CTNND1-215ENST00000526938 ANKRD50Q9ULJ7 1429 aa11.93□□□□□ -0.5
CTNND1-215ENST00000526938 CAMSAP2Q08AD1 1489 aa11.92□□□□□ -0.5
CTNND1-215ENST00000526938 C11orf95C9JLR9 678 aaPredicted RBP11.92□□□□□ -0.5
CTNND1-215ENST00000526938 TCOF1Q13428 1488 aaKnown RBP11.92□□□□□ -0.5
CTNND1-215ENST00000526938 NCOA1Q15788 1441 aa11.92□□□□□ -0.5
CTNND1-215ENST00000526938 MRS2Q9HD23 443 aa11.91□□□□□ -0.5
CTNND1-215ENST00000526938 KIF15Q9NS87 1388 aa11.91□□□□□ -0.5
CTNND1-215ENST00000526938 NPM1P06748 294 aaKnown RBP eCLIP11.91□□□□□ -0.5
CTNND1-215ENST00000526938 ANKRD30BQ9BXX2 1392 aa11.9□□□□□ -0.5
CTNND1-215ENST00000526938 EFCAB2Q5VUJ9 269 aa11.9□□□□□ -0.5
CTNND1-215ENST00000526938 AKNAQ7Z591 1439 aa11.9□□□□□ -0.5
CTNND1-215ENST00000526938 KDM6BO15054 1643 aa11.9□□□□□ -0.5
CTNND1-215ENST00000526938 ROCK1Q13464 1354 aa11.9□□□□□ -0.5
CTNND1-215ENST00000526938 AFAP1Q8N556 730 aa11.89□□□□□ -0.51
CTNND1-215ENST00000526938 IRX6P78412 446 aaPredicted RBP11.89□□□□□ -0.51
CTNND1-215ENST00000526938 SUPT16HQ9Y5B9 1047 aaKnown RBP11.88□□□□□ -0.51
CTNND1-215ENST00000526938 C9orf84Q5VXU9 1444 aa11.88□□□□□ -0.51
CTNND1-215ENST00000526938 SENP3Q9H4L4 574 aaPredicted RBP11.88□□□□□ -0.51
CTNND1-215ENST00000526938 CCER2I3L3R5 266 aa11.87□□□□□ -0.51
CTNND1-215ENST00000526938 KIF14Q15058 1648 aa11.86□□□□□ -0.51
CTNND1-215ENST00000526938 CHGAP10645 457 aaKnown RBP11.86□□□□□ -0.51
CTNND1-215ENST00000526938 CCDC184Q52MB2 194 aa11.85□□□□□ -0.51
CTNND1-215ENST00000526938 RSPH4AQ5TD94 716 aa11.85□□□□□ -0.51
CTNND1-215ENST00000526938 ST20-MTHFSA0A0A6YYL1 179 aa11.84□□□□□ -0.51
CTNND1-215ENST00000526938 SALL2Q9Y467 1007 aaPredicted RBP11.84□□□□□ -0.51
CTNND1-215ENST00000526938 KIF7Q2M1P5 1343 aa11.83□□□□□ -0.52
CTNND1-215ENST00000526938 SPAG9O60271 1321 aaKnown RBP11.82□□□□□ -0.52
CTNND1-215ENST00000526938 ARHGAP5Q13017 1502 aa11.82□□□□□ -0.52
CTNND1-215ENST00000526938 KIAA1107Q9UPP5 1409 aa11.82□□□□□ -0.52
CTNND1-215ENST00000526938 DENND4BO75064 1496 aaPredicted RBP11.82□□□□□ -0.52
CTNND1-215ENST00000526938 KIF3BO15066 747 aa11.81□□□□□ -0.52
CTNND1-215ENST00000526938 USP47Q96K76 1375 aa11.81□□□□□ -0.52
CTNND1-215ENST00000526938 CCDC7Q96M83 1385 aa11.81□□□□□ -0.52
CTNND1-215ENST00000526938 PRKRIP1Q9H875 184 aaPredicted RBP11.8□□□□□ -0.52
CTNND1-215ENST00000526938 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
CTNND1-215ENST00000526938 NBPF1Q3BBV0 1214 aa11.8□□□□□ -0.52
CTNND1-215ENST00000526938 TMC1Q8TDI8 760 aa11.79□□□□□ -0.52
CTNND1-215ENST00000526938 RPRD2Q5VT52 1461 aaKnown RBP11.79□□□□□ -0.52
CTNND1-215ENST00000526938 ROCK2O75116 1388 aaKnown RBP11.78□□□□□ -0.52
CTNND1-215ENST00000526938 ERCC6L2Q5T890 1561 aa11.78□□□□□ -0.52
CTNND1-215ENST00000526938 DNMT1P26358 1616 aaKnown RBP11.77□□□□□ -0.52
CTNND1-215ENST00000526938 GGT6Q6P531 493 aa11.77□□□□□ -0.52
CTNND1-215ENST00000526938 PZPP20742 1482 aa11.77□□□□□ -0.52
CTNND1-215ENST00000526938 CCDC144AA2RUR9 1427 aa11.77□□□□□ -0.53
CTNND1-215ENST00000526938 ABCA8O94911 1581 aa11.76□□□□□ -0.53
CTNND1-215ENST00000526938 ABCC10Q5T3U5 1492 aa11.75□□□□□ -0.53
CTNND1-215ENST00000526938 CCDC141Q6ZP82 1450 aa11.75□□□□□ -0.53
CTNND1-215ENST00000526938 CC2D1BQ5T0F9 858 aaKnown RBP11.74□□□□□ -0.53
CTNND1-215ENST00000526938 CYB5RLQ6IPT4 315 aa11.74□□□□□ -0.53
CTNND1-215ENST00000526938 PLEKHH2Q8IVE3 1493 aa11.73□□□□□ -0.53
CTNND1-215ENST00000526938 CNTLNQ9NXG0 1405 aa11.72□□□□□ -0.53
CTNND1-215ENST00000526938 SYCP2Q9BX26 1530 aa11.71□□□□□ -0.53
CTNND1-215ENST00000526938 GCC2Q8IWJ2 1684 aa11.71□□□□□ -0.54
CTNND1-215ENST00000526938 SCAPERQ9BY12 1400 aa11.7□□□□□ -0.54
CTNND1-215ENST00000526938 MBD5Q9P267 1494 aa11.7□□□□□ -0.54
CTNND1-215ENST00000526938 NUTM2DQ5VT03 806 aaPredicted RBP11.7□□□□□ -0.54
CTNND1-215ENST00000526938 ITSN2Q9NZM3 1697 aa11.7□□□□□ -0.54
CTNND1-215ENST00000526938 CHD1O14646 1710 aa11.7□□□□□ -0.54
CTNND1-215ENST00000526938 TRAPPC8Q9Y2L5 1435 aa11.69□□□□□ -0.54
CTNND1-215ENST00000526938 TEX14Q8IWB6 1497 aa11.68□□□□□ -0.54
CTNND1-215ENST00000526938 KDM5BQ9UGL1 1544 aa11.68□□□□□ -0.54
CTNND1-215ENST00000526938 ADGRL2O95490 1459 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms