RNA–Protein interactions for RNA: ENST00000526884.1

NFRKB-204, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 3

Gene NFRKB, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-204ENST00000526884 RAPGEF3O95398 923 aa38.04■■■■□ 3.68
NFRKB-204ENST00000526884 EFCAB2Q5VUJ9 269 aa38.03■■■■□ 3.68
NFRKB-204ENST00000526884 ARHGEF40Q8TER5 1519 aa38.01■■■■□ 3.67
NFRKB-204ENST00000526884 EHBP1L1Q8N3D4 1523 aa37.99■■■■□ 3.67
NFRKB-204ENST00000526884 VPS8Q8N3P4 1428 aa37.99■■■■□ 3.67
NFRKB-204ENST00000526884 POGZQ7Z3K3 1410 aa37.97■■■■□ 3.67
NFRKB-204ENST00000526884 KDM4FA0A1W2PPD8 638 aa37.96■■■■□ 3.67
NFRKB-204ENST00000526884 SCAPERQ9BY12 1400 aa37.95■■■■□ 3.67
NFRKB-204ENST00000526884 MTUS2Q5JR59 1369 aa37.95■■■■□ 3.67
NFRKB-204ENST00000526884 MAGI2Q86UL8 1455 aa37.95■■■■□ 3.67
NFRKB-204ENST00000526884 ZNF518AQ6AHZ1 1483 aa37.89■■■■□ 3.66
NFRKB-204ENST00000526884 TIAM1Q13009 1591 aa37.89■■■■□ 3.66
NFRKB-204ENST00000526884 ZFYVE16Q7Z3T8 1539 aa37.88■■■■□ 3.65
NFRKB-204ENST00000526884 ABCC1P33527 1531 aa37.87■■■■□ 3.65
NFRKB-204ENST00000526884 ITSN2Q9NZM3 1697 aa37.87■■■■□ 3.65
NFRKB-204ENST00000526884 KDM5CP41229 1560 aa37.86■■■■□ 3.65
NFRKB-204ENST00000526884 GPATCH8Q9UKJ3 1502 aaKnown RBP37.83■■■■□ 3.65
NFRKB-204ENST00000526884 SUPT6HQ7KZ85 1726 aaKnown RBP37.82■■■■□ 3.65
NFRKB-204ENST00000526884 MAP3K1Q13233 1512 aa37.8■■■■□ 3.64
NFRKB-204ENST00000526884 HECW2Q9P2P5 1572 aa37.77■■■■□ 3.64
NFRKB-204ENST00000526884 CCNB3Q8WWL7 1395 aa37.77■■■■□ 3.64
NFRKB-204ENST00000526884 SAMD9LQ8IVG5 1584 aa37.76■■■■□ 3.64
NFRKB-204ENST00000526884 BCORL1Q5H9F3 1711 aa37.76■■■■□ 3.64
NFRKB-204ENST00000526884 ADAMTSL3P82987 1691 aa37.73■■■■□ 3.63
NFRKB-204ENST00000526884 PLEKHH2Q8IVE3 1493 aa37.72■■■■□ 3.63
NFRKB-204ENST00000526884 YEATS2Q9ULM3 1422 aa37.72■■■■□ 3.63
NFRKB-204ENST00000526884 ARHGEF12Q9NZN5 1544 aa37.69■■■■□ 3.62
NFRKB-204ENST00000526884 MLH3Q9UHC1 1453 aa37.67■■■■□ 3.62
NFRKB-204ENST00000526884 LRRC9Q6ZRR7 1453 aa37.66■■■■□ 3.62
NFRKB-204ENST00000526884 SYCP2Q9BX26 1530 aa37.66■■■■□ 3.62
NFRKB-204ENST00000526884 NCOA2Q15596 1464 aa37.65■■■■□ 3.62
NFRKB-204ENST00000526884 KIAA1107Q9UPP5 1409 aa37.65■■■■□ 3.62
NFRKB-204ENST00000526884 CFDP1Q9UEE9 299 aaPredicted RBP37.65■■■■□ 3.62
NFRKB-204ENST00000526884 ATP10AO60312 1499 aa37.64■■■■□ 3.62
NFRKB-204ENST00000526884 SIGLEC1Q9BZZ2 1709 aa37.64■■■■□ 3.62
NFRKB-204ENST00000526884 C9orf84Q5VXU9 1444 aa37.63■■■■□ 3.61
NFRKB-204ENST00000526884 REREQ9P2R6 1566 aa37.63■■■■□ 3.61
NFRKB-204ENST00000526884 TRAPPC8Q9Y2L5 1435 aa37.62■■■■□ 3.61
NFRKB-204ENST00000526884 DIP2CQ9Y2E4 1556 aa37.61■■■■□ 3.61
NFRKB-204ENST00000526884 AFAP1Q8N556 730 aa37.6■■■■□ 3.61
NFRKB-204ENST00000526884 ARID4BQ4LE39 1312 aaPredicted RBP37.6■■■■□ 3.61
NFRKB-204ENST00000526884 ABCA6Q8N139 1617 aa37.59■■■■□ 3.61
NFRKB-204ENST00000526884 KIDINS220Q9ULH0 1771 aa37.59■■■■□ 3.61
NFRKB-204ENST00000526884 ZNF777Q9ULD5 760 aaPredicted RBP37.57■■■■□ 3.6
NFRKB-204ENST00000526884 MADDQ8WXG6 1647 aa37.57■■■■□ 3.6
NFRKB-204ENST00000526884 INO80Q9ULG1 1556 aaPredicted RBP37.5■■■■□ 3.59
NFRKB-204ENST00000526884 FER1L4A9Z1Z3 1794 aa37.49■■■■□ 3.59
NFRKB-204ENST00000526884 RIMS1Q86UR5 1692 aaKnown RBP37.47■■■■□ 3.59
NFRKB-204ENST00000526884 PTPRMP28827 1452 aa37.46■■■■□ 3.59
NFRKB-204ENST00000526884 APLP2Q06481 763 aa37.46■■■■□ 3.59
NFRKB-204ENST00000526884 MYT1LQ9UL68 1186 aa37.46■■■■□ 3.59
NFRKB-204ENST00000526884 ATP7AQ04656 1500 aa37.46■■■■□ 3.59
NFRKB-204ENST00000526884 AGLP35573 1532 aa37.43■■■■□ 3.58
NFRKB-204ENST00000526884 CAMSAP2Q08AD1 1489 aa37.43■■■■□ 3.58
NFRKB-204ENST00000526884 HNRNPMP52272 730 aaKnown RBP eCLIP37.42■■■■□ 3.583e-6■■■■□ 23.6
NFRKB-204ENST00000526884 MBD5Q9P267 1494 aa37.41■■■■□ 3.58
NFRKB-204ENST00000526884 SPAG9O60271 1321 aaKnown RBP37.39■■■■□ 3.58
NFRKB-204ENST00000526884 KANK4Q5T7N3 995 aaPredicted RBP37.38■■■■□ 3.57
NFRKB-204ENST00000526884 ADGBQ8N7X0 1667 aa37.37■■■■□ 3.57
NFRKB-204ENST00000526884 ARHGEF5Q12774 1597 aa37.36■■■■□ 3.57
NFRKB-204ENST00000526884 MYOM3Q5VTT5 1437 aa37.35■■■■□ 3.57
NFRKB-204ENST00000526884 ZNF644Q9H582 1327 aaPredicted RBP37.35■■■■□ 3.57
NFRKB-204ENST00000526884 CCDC141Q6ZP82 1450 aa37.34■■■■□ 3.57
NFRKB-204ENST00000526884 MIA2Q96PC5 1412 aa37.34■■■■□ 3.57
NFRKB-204ENST00000526884 RTEL1-TNFRSF6BF6WH68 1400 aa37.32■■■■□ 3.56
NFRKB-204ENST00000526884 PLXNC1O60486 1568 aa37.31■■■■□ 3.56
NFRKB-204ENST00000526884 RSPH4AQ5TD94 716 aa37.31■■■■□ 3.56
NFRKB-204ENST00000526884 MLECQ14165 292 aa37.24■■■■□ 3.55
NFRKB-204ENST00000526884 A2MP01023 1474 aa37.23■■■■□ 3.55
NFRKB-204ENST00000526884 MAST1Q9Y2H9 1570 aa37.18■■■■□ 3.54
NFRKB-204ENST00000526884 PTPN23Q9H3S7 1636 aa37.16■■■■□ 3.54
NFRKB-204ENST00000526884 MROH2AA6NES4 1674 aa37.13■■■■□ 3.53
NFRKB-204ENST00000526884 CNTLNQ9NXG0 1405 aa37.11■■■■□ 3.53
NFRKB-204ENST00000526884 CROCC2H7BZ55 1655 aa37.11■■■■□ 3.53
NFRKB-204ENST00000526884 C3P01024 1663 aa37.09■■■■□ 3.53
NFRKB-204ENST00000526884 SETD1BQ9UPS6 1966 aaKnown RBP37.08■■■■□ 3.53
NFRKB-204ENST00000526884 TSPY4P0CV99 314 aa37.08■■■■□ 3.53
NFRKB-204ENST00000526884 TSPY10P0CW01 314 aa37.08■■■■□ 3.53
NFRKB-204ENST00000526884 FGD6Q6ZV73 1430 aa37.08■■■■□ 3.53
NFRKB-204ENST00000526884 TCOF1Q13428 1488 aaKnown RBP37.06■■■■□ 3.52
NFRKB-204ENST00000526884 PREX1Q8TCU6 1659 aa37.05■■■■□ 3.52
NFRKB-204ENST00000526884 DHX29Q7Z478 1369 aaKnown RBP37.04■■■■□ 3.52
NFRKB-204ENST00000526884 ESF1Q9H501 851 aaKnown RBP37.04■■■■□ 3.52
NFRKB-204ENST00000526884 SHANK2Q9UPX8 1470 aa37.03■■■■□ 3.52
NFRKB-204ENST00000526884 LMTK3Q96Q04 1460 aa37.02■■■■□ 3.52
NFRKB-204ENST00000526884 DNMT1P26358 1616 aaKnown RBP37.02■■■■□ 3.52
NFRKB-204ENST00000526884 FAM135AQ9P2D6 1515 aa37■■■■□ 3.51
NFRKB-204ENST00000526884 CLTCQ00610 1675 aaKnown RBP36.98■■■■□ 3.51
NFRKB-204ENST00000526884 PPP6R1Q9UPN7 881 aa36.97■■■■□ 3.51
NFRKB-204ENST00000526884 EIF2AK4Q9P2K8 1649 aaKnown RBP36.96■■■■□ 3.51
NFRKB-204ENST00000526884 PLPPR3Q6T4P5 718 aa36.9■■■■□ 3.5
NFRKB-204ENST00000526884 DAPK1P53355 1430 aa36.9■■■■□ 3.5
NFRKB-204ENST00000526884 ABCC5O15440 1437 aa36.89■■■■□ 3.5
NFRKB-204ENST00000526884 RNF17Q9BXT8 1623 aaKnown RBP36.88■■■■□ 3.5
NFRKB-204ENST00000526884 DUOX2Q9NRD8 1548 aa36.87■■■■□ 3.49
NFRKB-204ENST00000526884 CEBPAP49715 358 aaPredicted RBP36.86■■■■□ 3.49
NFRKB-204ENST00000526884 GGT6Q6P531 493 aa36.85■■■■□ 3.49
NFRKB-204ENST00000526884 NPATQ14207 1427 aa36.85■■■■□ 3.49
NFRKB-204ENST00000526884 KDM5DQ9BY66 1539 aa36.84■■■■□ 3.49
NFRKB-204ENST00000526884 UHRF1BP1Q6BDS2 1440 aa36.82■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms