RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 ZNF771Q7L3S4 317 aaPredicted RBP15.83■□□□□ 0.12
FGFR1-227ENST00000526570 KIAA2012Q0VF49 1180 aa15.82■□□□□ 0.12
FGFR1-227ENST00000526570 SETQ01105 290 aaPredicted RBP15.82■□□□□ 0.12
FGFR1-227ENST00000526570 GOLGA6L3A6NEY3 463 aa15.82■□□□□ 0.12
FGFR1-227ENST00000526570 RAPGEF2Q9Y4G8 1499 aa15.81■□□□□ 0.12
FGFR1-227ENST00000526570 ARHGAP35Q9NRY4 1499 aa15.81■□□□□ 0.12
FGFR1-227ENST00000526570 VPS8Q8N3P4 1428 aa15.81■□□□□ 0.12
FGFR1-227ENST00000526570 A0A0G2JS52 829 aa15.81■□□□□ 0.12
FGFR1-227ENST00000526570 CARD11Q9BXL7 1154 aa15.81■□□□□ 0.12
FGFR1-227ENST00000526570 SIN3AQ96ST3 1273 aa15.8■□□□□ 0.12
FGFR1-227ENST00000526570 KANK1Q14678 1352 aa15.8■□□□□ 0.12
FGFR1-227ENST00000526570 ZRSR1Q15695 479 aaKnown RBP15.8■□□□□ 0.12
FGFR1-227ENST00000526570 KANK4Q5T7N3 995 aaPredicted RBP15.79■□□□□ 0.12
FGFR1-227ENST00000526570 FMN1Q68DA7 1419 aa15.79■□□□□ 0.12
FGFR1-227ENST00000526570 GGT6Q6P531 493 aa15.77■□□□□ 0.11
FGFR1-227ENST00000526570 CCER2I3L3R5 266 aa15.76■□□□□ 0.11
FGFR1-227ENST00000526570 POGKQ9P215 609 aa15.76■□□□□ 0.11
FGFR1-227ENST00000526570 FHOD3Q2V2M9 1422 aa15.76■□□□□ 0.11
FGFR1-227ENST00000526570 JPH4Q96JJ6 628 aa15.75■□□□□ 0.11
FGFR1-227ENST00000526570 HAP1P54257 671 aaPredicted RBP15.75■□□□□ 0.11
FGFR1-227ENST00000526570 GOLGA6L1Q8N7Z2 621 aa15.75■□□□□ 0.11
FGFR1-227ENST00000526570 GZF1Q9H116 711 aaPredicted RBP15.74■□□□□ 0.11
FGFR1-227ENST00000526570 RGS3P49796 1198 aa15.74■□□□□ 0.11
FGFR1-227ENST00000526570 CDCA8Q53HL2 280 aa15.73■□□□□ 0.11
FGFR1-227ENST00000526570 EFCAB2Q5VUJ9 269 aa15.72■□□□□ 0.11
FGFR1-227ENST00000526570 SENP3-EIF4A1A0A087X0R7 540 aa15.72■□□□□ 0.11
FGFR1-227ENST00000526570 MYH16Q9H6N6 1097 aa15.71■□□□□ 0.11
FGFR1-227ENST00000526570 DCAF11Q8TEB1 546 aa15.7■□□□□ 0.1
FGFR1-227ENST00000526570 KNSTRNQ9Y448 316 aa15.7■□□□□ 0.1
FGFR1-227ENST00000526570 TCERG1O14776 1098 aaKnown RBP15.7■□□□□ 0.1
FGFR1-227ENST00000526570 MAP7D2Q96T17 732 aa15.69■□□□□ 0.1
FGFR1-227ENST00000526570 HSP90AB1P08238 724 aaKnown RBP15.69■□□□□ 0.1
FGFR1-227ENST00000526570 FAM13BQ9NYF5 915 aa15.69■□□□□ 0.1
FGFR1-227ENST00000526570 LMOD2Q6P5Q4 547 aa15.68■□□□□ 0.1
FGFR1-227ENST00000526570 NCAPD3P42695 1498 aa15.68■□□□□ 0.1
FGFR1-227ENST00000526570 FGD5Q6ZNL6 1462 aa15.67■□□□□ 0.1
FGFR1-227ENST00000526570 RUSC2Q8N2Y8 1516 aa15.66■□□□□ 0.1
FGFR1-227ENST00000526570 BRPF3Q9ULD4 1205 aa15.66■□□□□ 0.1
FGFR1-227ENST00000526570 SETD5Q9C0A6 1442 aa15.66■□□□□ 0.1
FGFR1-227ENST00000526570 TPRNQ4KMQ1 711 aa15.66■□□□□ 0.1
FGFR1-227ENST00000526570 HNRNPMP52272 730 aaKnown RBP eCLIP15.66■□□□□ 0.16e-6■□□□□ 8.8
FGFR1-227ENST00000526570 SPRYD3Q8NCJ5 442 aa15.66■□□□□ 0.1
FGFR1-227ENST00000526570 RAD54L2Q9Y4B4 1467 aa15.66■□□□□ 0.1
FGFR1-227ENST00000526570 PKD2Q13563 968 aa15.65■□□□□ 0.1
FGFR1-227ENST00000526570 DRC7Q8IY82 874 aa15.65■□□□□ 0.1
FGFR1-227ENST00000526570 FOXD1Q16676 465 aa15.65■□□□□ 0.1
FGFR1-227ENST00000526570 CFAP53Q96M91 514 aa15.65■□□□□ 0.1
FGFR1-227ENST00000526570 HDGFP51858 240 aaKnown RBP15.64■□□□□ 0.09
FGFR1-227ENST00000526570 MTERF4Q7Z6M4 381 aaKnown RBP15.64■□□□□ 0.09
FGFR1-227ENST00000526570 HSCBQ8IWL3 235 aa15.64■□□□□ 0.09
FGFR1-227ENST00000526570 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
FGFR1-227ENST00000526570 SLKQ9H2G2 1235 aaPredicted RBP15.63■□□□□ 0.09
FGFR1-227ENST00000526570 CYB5RLQ6IPT4 315 aa15.62■□□□□ 0.09
FGFR1-227ENST00000526570 GBP4Q96PP9 640 aa15.62■□□□□ 0.09
FGFR1-227ENST00000526570 GAPVD1Q14C86 1478 aa15.62■□□□□ 0.09
FGFR1-227ENST00000526570 ANKRD30AQ9BXX3 1397 aa15.61■□□□□ 0.09
FGFR1-227ENST00000526570 SAFB2Q14151 953 aaKnown RBP eCLIP15.6■□□□□ 0.09
FGFR1-227ENST00000526570 FAM43AQ8N2R8 423 aa15.6■□□□□ 0.09
FGFR1-227ENST00000526570 PTPRGP23470 1445 aa15.6■□□□□ 0.09
FGFR1-227ENST00000526570 CCDC18Q5T9S5 1454 aa15.59■□□□□ 0.09
FGFR1-227ENST00000526570 CCDC66A2RUB6 948 aa15.59■□□□□ 0.09
FGFR1-227ENST00000526570 KIF3BO15066 747 aa15.59■□□□□ 0.09
FGFR1-227ENST00000526570 RRP9O43818 475 aaKnown RBP15.59■□□□□ 0.09
FGFR1-227ENST00000526570 NUP155O75694 1391 aa15.59■□□□□ 0.09
FGFR1-227ENST00000526570 NOM1Q5C9Z4 860 aaKnown RBP15.59■□□□□ 0.09
FGFR1-227ENST00000526570 PATL2C9JE40 543 aaKnown RBP15.58■□□□□ 0.09
FGFR1-227ENST00000526570 SPAG9O60271 1321 aaKnown RBP15.57■□□□□ 0.08
FGFR1-227ENST00000526570 STK26Q9P289 416 aa15.57■□□□□ 0.08
FGFR1-227ENST00000526570 CC2D1BQ5T0F9 858 aaKnown RBP15.57■□□□□ 0.08
FGFR1-227ENST00000526570 AQRO60306 1485 aaKnown RBP eCLIP15.57■□□□□ 0.08
FGFR1-227ENST00000526570 CC2D2AQ9P2K1 1620 aa15.56■□□□□ 0.08
FGFR1-227ENST00000526570 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.56■□□□□ 0.08
FGFR1-227ENST00000526570 TMF1P82094 1093 aa15.56■□□□□ 0.08
FGFR1-227ENST00000526570 SRPK2P78362 688 aaKnown RBP15.55■□□□□ 0.08
FGFR1-227ENST00000526570 TPM2P07951 284 aa15.55■□□□□ 0.08
FGFR1-227ENST00000526570 MPHOSPH9Q99550 1183 aa15.55■□□□□ 0.08
FGFR1-227ENST00000526570 ZMYND15Q9H091 742 aa15.54■□□□□ 0.08
FGFR1-227ENST00000526570 NOC3LQ8WTT2 800 aaKnown RBP15.54■□□□□ 0.08
FGFR1-227ENST00000526570 CASC1Q6TDU7 716 aa15.54■□□□□ 0.08
FGFR1-227ENST00000526570 IGF1RP08069 1367 aa15.53■□□□□ 0.08
FGFR1-227ENST00000526570 PDIA4P13667 645 aaKnown RBP15.53■□□□□ 0.08
FGFR1-227ENST00000526570 TEX35Q5T0J7 233 aa15.53■□□□□ 0.08
FGFR1-227ENST00000526570 RAB3GAP2Q9H2M9 1393 aa15.53■□□□□ 0.08
FGFR1-227ENST00000526570 FRAT1Q92837 279 aaPredicted RBP15.53■□□□□ 0.08
FGFR1-227ENST00000526570 NESP48681 1621 aa15.52■□□□□ 0.08
FGFR1-227ENST00000526570 NEUROD2Q15784 382 aa15.52■□□□□ 0.08
FGFR1-227ENST00000526570 HTATSF1O43719 755 aaKnown RBP15.51■□□□□ 0.07
FGFR1-227ENST00000526570 SLC4A3P48751 1232 aa15.51■□□□□ 0.07
FGFR1-227ENST00000526570 MAPK8IP3Q9UPT6 1336 aa15.5■□□□□ 0.07
FGFR1-227ENST00000526570 SOX12O15370 315 aa15.5■□□□□ 0.07
FGFR1-227ENST00000526570 NUDCQ9Y266 331 aa15.5■□□□□ 0.07
FGFR1-227ENST00000526570 WASHC2CQ9Y4E1 1318 aa15.5■□□□□ 0.07
FGFR1-227ENST00000526570 CSPP1Q1MSJ5 1256 aa15.49■□□□□ 0.07
FGFR1-227ENST00000526570 MSH5O43196 834 aa15.49■□□□□ 0.07
FGFR1-227ENST00000526570 RSPH4AQ5TD94 716 aa15.49■□□□□ 0.07
FGFR1-227ENST00000526570 PDE4AP27815 886 aa15.49■□□□□ 0.07
FGFR1-227ENST00000526570 GPS2Q13227 327 aa15.48■□□□□ 0.07
FGFR1-227ENST00000526570 GOLGA6L4A6NEF3 574 aa15.48■□□□□ 0.07
FGFR1-227ENST00000526570 U2SURPO15042 1029 aaKnown RBP15.47■□□□□ 0.07
FGFR1-227ENST00000526570 TAF3Q5VWG9 929 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms