RNA–Protein interactions for RNA: ENST00000526232.1

CPNE7-204, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-204ENST00000526232 SCAPERQ9BY12 1400 aa29■■■□□ 2.23
CPNE7-204ENST00000526232 POGZQ7Z3K3 1410 aa28.99■■■□□ 2.23
CPNE7-204ENST00000526232 PREX2Q70Z35 1606 aa28.94■■■□□ 2.22
CPNE7-204ENST00000526232 MAGI2Q86UL8 1455 aa28.93■■■□□ 2.22
CPNE7-204ENST00000526232 ZFYVE16Q7Z3T8 1539 aa28.93■■■□□ 2.22
CPNE7-204ENST00000526232 LOC105371045A0A1W2PR82 267 aa28.91■■■□□ 2.22
CPNE7-204ENST00000526232 CDC42BPBQ9Y5S2 1711 aa28.89■■■□□ 2.22
CPNE7-204ENST00000526232 ZNF518AQ6AHZ1 1483 aa28.88■■■□□ 2.21
CPNE7-204ENST00000526232 MTUS2Q5JR59 1369 aa28.88■■■□□ 2.21
CPNE7-204ENST00000526232 ARID4BQ4LE39 1312 aaPredicted RBP28.86■■■□□ 2.21
CPNE7-204ENST00000526232 YEATS2Q9ULM3 1422 aa28.86■■■□□ 2.21
CPNE7-204ENST00000526232 CDC42BPAQ5VT25 1732 aa28.84■■■□□ 2.21
CPNE7-204ENST00000526232 ABCC1P33527 1531 aa28.84■■■□□ 2.21
CPNE7-204ENST00000526232 EHBP1L1Q8N3D4 1523 aa28.84■■■□□ 2.21
CPNE7-204ENST00000526232 KDM5CP41229 1560 aa28.82■■■□□ 2.2
CPNE7-204ENST00000526232 BCORL1Q5H9F3 1711 aa28.8■■■□□ 2.2
CPNE7-204ENST00000526232 ADAMTSL3P82987 1691 aa28.8■■■□□ 2.2
CPNE7-204ENST00000526232 GPATCH8Q9UKJ3 1502 aaKnown RBP28.79■■■□□ 2.2
CPNE7-204ENST00000526232 VPS8Q8N3P4 1428 aa28.79■■■□□ 2.2
CPNE7-204ENST00000526232 CCNB3Q8WWL7 1395 aa28.77■■■□□ 2.2
CPNE7-204ENST00000526232 ITSN2Q9NZM3 1697 aa28.77■■■□□ 2.2
CPNE7-204ENST00000526232 HECW2Q9P2P5 1572 aa28.75■■■□□ 2.19
CPNE7-204ENST00000526232 ATP10AO60312 1499 aa28.75■■■□□ 2.19
CPNE7-204ENST00000526232 AFAP1Q8N556 730 aa28.75■■■□□ 2.19
CPNE7-204ENST00000526232 C9orf84Q5VXU9 1444 aa28.75■■■□□ 2.19
CPNE7-204ENST00000526232 ARHGEF12Q9NZN5 1544 aa28.74■■■□□ 2.19
CPNE7-204ENST00000526232 SAMD9LQ8IVG5 1584 aa28.73■■■□□ 2.19
CPNE7-204ENST00000526232 MADDQ8WXG6 1647 aa28.72■■■□□ 2.19
CPNE7-204ENST00000526232 TRAPPC8Q9Y2L5 1435 aa28.72■■■□□ 2.19
CPNE7-204ENST00000526232 ZNF777Q9ULD5 760 aaPredicted RBP28.72■■■□□ 2.19
CPNE7-204ENST00000526232 TIAM1Q13009 1591 aa28.71■■■□□ 2.19
CPNE7-204ENST00000526232 PTPRMP28827 1452 aa28.71■■■□□ 2.19
CPNE7-204ENST00000526232 MLH3Q9UHC1 1453 aa28.71■■■□□ 2.19
CPNE7-204ENST00000526232 CFDP1Q9UEE9 299 aaPredicted RBP28.7■■■□□ 2.18
CPNE7-204ENST00000526232 MYT1LQ9UL68 1186 aa28.7■■■□□ 2.18
CPNE7-204ENST00000526232 SIGLEC1Q9BZZ2 1709 aa28.69■■■□□ 2.18
CPNE7-204ENST00000526232 PLEKHH2Q8IVE3 1493 aa28.69■■■□□ 2.18
CPNE7-204ENST00000526232 SYCP2Q9BX26 1530 aa28.69■■■□□ 2.18
CPNE7-204ENST00000526232 DIP2CQ9Y2E4 1556 aa28.67■■■□□ 2.18
CPNE7-204ENST00000526232 KIAA1107Q9UPP5 1409 aa28.65■■■□□ 2.18
CPNE7-204ENST00000526232 SUPT6HQ7KZ85 1726 aaKnown RBP28.64■■■□□ 2.18
CPNE7-204ENST00000526232 ABCA6Q8N139 1617 aa28.64■■■□□ 2.18
CPNE7-204ENST00000526232 REREQ9P2R6 1566 aa28.62■■■□□ 2.17
CPNE7-204ENST00000526232 RIMS1Q86UR5 1692 aaKnown RBP28.62■■■□□ 2.17
CPNE7-204ENST00000526232 NCOA2Q15596 1464 aa28.62■■■□□ 2.17
CPNE7-204ENST00000526232 MLECQ14165 292 aa28.59■■■□□ 2.17
CPNE7-204ENST00000526232 LRRC9Q6ZRR7 1453 aa28.59■■■□□ 2.17
CPNE7-204ENST00000526232 MAP3K1Q13233 1512 aa28.59■■■□□ 2.17
CPNE7-204ENST00000526232 HNRNPMP52272 730 aaKnown RBP eCLIP28.57■■■□□ 2.16
CPNE7-204ENST00000526232 KIDINS220Q9ULH0 1771 aa28.57■■■□□ 2.16
CPNE7-204ENST00000526232 FER1L4A9Z1Z3 1794 aa28.55■■■□□ 2.16
CPNE7-204ENST00000526232 SPAG9O60271 1321 aaKnown RBP28.55■■■□□ 2.16
CPNE7-204ENST00000526232 AGLP35573 1532 aa28.53■■■□□ 2.16
CPNE7-204ENST00000526232 ATP7AQ04656 1500 aa28.52■■■□□ 2.16
CPNE7-204ENST00000526232 INO80Q9ULG1 1556 aaPredicted RBP28.51■■■□□ 2.15
CPNE7-204ENST00000526232 ZNF644Q9H582 1327 aaPredicted RBP28.5■■■□□ 2.15
CPNE7-204ENST00000526232 CAMSAP2Q08AD1 1489 aa28.47■■■□□ 2.15
CPNE7-204ENST00000526232 MBD5Q9P267 1494 aa28.47■■■□□ 2.15
CPNE7-204ENST00000526232 APLP2Q06481 763 aa28.44■■■□□ 2.14
CPNE7-204ENST00000526232 KANK4Q5T7N3 995 aaPredicted RBP28.43■■■□□ 2.14
CPNE7-204ENST00000526232 PLPPR3Q6T4P5 718 aa28.43■■■□□ 2.14
CPNE7-204ENST00000526232 CCDC141Q6ZP82 1450 aa28.41■■■□□ 2.14
CPNE7-204ENST00000526232 PLXNC1O60486 1568 aa28.39■■■□□ 2.14
CPNE7-204ENST00000526232 A2MP01023 1474 aa28.39■■■□□ 2.13
CPNE7-204ENST00000526232 RTEL1-TNFRSF6BF6WH68 1400 aa28.38■■■□□ 2.13
CPNE7-204ENST00000526232 LMTK3Q96Q04 1460 aa28.38■■■□□ 2.13
CPNE7-204ENST00000526232 MYOM3Q5VTT5 1437 aa28.36■■■□□ 2.13
CPNE7-204ENST00000526232 RSPH4AQ5TD94 716 aa28.36■■■□□ 2.13
CPNE7-204ENST00000526232 ESF1Q9H501 851 aaKnown RBP28.36■■■□□ 2.13
CPNE7-204ENST00000526232 ADGBQ8N7X0 1667 aa28.35■■■□□ 2.13
CPNE7-204ENST00000526232 ARHGEF5Q12774 1597 aa28.35■■■□□ 2.13
CPNE7-204ENST00000526232 MIA2Q96PC5 1412 aa28.34■■■□□ 2.13
CPNE7-204ENST00000526232 CNTLNQ9NXG0 1405 aa28.33■■■□□ 2.13
CPNE7-204ENST00000526232 CEBPAP49715 358 aaPredicted RBP28.28■■■□□ 2.12
CPNE7-204ENST00000526232 TSPY4P0CV99 314 aa28.25■■■□□ 2.11
CPNE7-204ENST00000526232 TSPY10P0CW01 314 aa28.25■■■□□ 2.11
CPNE7-204ENST00000526232 PREX1Q8TCU6 1659 aa28.25■■■□□ 2.11
CPNE7-204ENST00000526232 C3P01024 1663 aa28.24■■■□□ 2.11
CPNE7-204ENST00000526232 DHX29Q7Z478 1369 aaKnown RBP28.24■■■□□ 2.11
CPNE7-204ENST00000526232 MROH2AA6NES4 1674 aa28.22■■■□□ 2.11
CPNE7-204ENST00000526232 MAST1Q9Y2H9 1570 aa28.2■■■□□ 2.11
CPNE7-204ENST00000526232 GGT6Q6P531 493 aa28.19■■■□□ 2.1
CPNE7-204ENST00000526232 UHRF1BP1Q6BDS2 1440 aa28.18■■■□□ 2.1
CPNE7-204ENST00000526232 HSPA2P54652 639 aa28.18■■■□□ 2.1
CPNE7-204ENST00000526232 PPP6R1Q9UPN7 881 aa28.16■■■□□ 2.1
CPNE7-204ENST00000526232 PTPN23Q9H3S7 1636 aa28.16■■■□□ 2.1
CPNE7-204ENST00000526232 FGD6Q6ZV73 1430 aa28.16■■■□□ 2.1
CPNE7-204ENST00000526232 CLTCQ00610 1675 aaKnown RBP28.16■■■□□ 2.1
CPNE7-204ENST00000526232 ZMYM3Q14202 1370 aa28.13■■■□□ 2.09
CPNE7-204ENST00000526232 NPATQ14207 1427 aa28.13■■■□□ 2.09
CPNE7-204ENST00000526232 KIF3BO15066 747 aa28.12■■■□□ 2.09
CPNE7-204ENST00000526232 TCOF1Q13428 1488 aaKnown RBP28.11■■■□□ 2.09
CPNE7-204ENST00000526232 SHANK2Q9UPX8 1470 aa28.11■■■□□ 2.09
CPNE7-204ENST00000526232 FAM135AQ9P2D6 1515 aa28.11■■■□□ 2.09
CPNE7-204ENST00000526232 SETD1BQ9UPS6 1966 aaKnown RBP28.08■■■□□ 2.09
CPNE7-204ENST00000526232 CROCC2H7BZ55 1655 aa28.07■■■□□ 2.08
CPNE7-204ENST00000526232 KDM5DQ9BY66 1539 aa28.07■■■□□ 2.08
CPNE7-204ENST00000526232 ABCC5O15440 1437 aa28.06■■■□□ 2.08
CPNE7-204ENST00000526232 DNMT1P26358 1616 aaKnown RBP28.05■■■□□ 2.08
CPNE7-204ENST00000526232 DAPK1P53355 1430 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms