RNA–Protein interactions for RNA: ENST00000525201.5

TSPAN4-214, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-214ENST00000525201 MAGI2Q86UL8 1455 aa27.89■■■□□ 2.06
TSPAN4-214ENST00000525201 POGZQ7Z3K3 1410 aa27.88■■■□□ 2.05
TSPAN4-214ENST00000525201 SCAPERQ9BY12 1400 aa27.88■■■□□ 2.05
TSPAN4-214ENST00000525201 ZFYVE16Q7Z3T8 1539 aa27.84■■■□□ 2.05
TSPAN4-214ENST00000525201 PREX2Q70Z35 1606 aa27.84■■■□□ 2.05
TSPAN4-214ENST00000525201 ZNF518AQ6AHZ1 1483 aa27.83■■■□□ 2.04
TSPAN4-214ENST00000525201 ARID4BQ4LE39 1312 aaPredicted RBP27.79■■■□□ 2.04
TSPAN4-214ENST00000525201 MTUS2Q5JR59 1369 aa27.78■■■□□ 2.04
TSPAN4-214ENST00000525201 CDC42BPBQ9Y5S2 1711 aa27.77■■■□□ 2.04
TSPAN4-214ENST00000525201 BCORL1Q5H9F3 1711 aa27.74■■■□□ 2.03
TSPAN4-214ENST00000525201 EHBP1L1Q8N3D4 1523 aa27.73■■■□□ 2.03
TSPAN4-214ENST00000525201 CDC42BPAQ5VT25 1732 aa27.72■■■□□ 2.03
TSPAN4-214ENST00000525201 ADAMTSL3P82987 1691 aa27.72■■■□□ 2.03
TSPAN4-214ENST00000525201 KDM5CP41229 1560 aa27.72■■■□□ 2.03
TSPAN4-214ENST00000525201 ABCC1P33527 1531 aa27.72■■■□□ 2.03
TSPAN4-214ENST00000525201 YEATS2Q9ULM3 1422 aa27.7■■■□□ 2.03
TSPAN4-214ENST00000525201 HECW2Q9P2P5 1572 aa27.69■■■□□ 2.02
TSPAN4-214ENST00000525201 CCNB3Q8WWL7 1395 aa27.68■■■□□ 2.02
TSPAN4-214ENST00000525201 C9orf84Q5VXU9 1444 aa27.67■■■□□ 2.02
TSPAN4-214ENST00000525201 ATP10AO60312 1499 aa27.67■■■□□ 2.02
TSPAN4-214ENST00000525201 ITSN2Q9NZM3 1697 aa27.66■■■□□ 2.02
TSPAN4-214ENST00000525201 PLEKHH2Q8IVE3 1493 aa27.65■■■□□ 2.02
TSPAN4-214ENST00000525201 GPATCH8Q9UKJ3 1502 aaKnown RBP27.65■■■□□ 2.02
TSPAN4-214ENST00000525201 VPS8Q8N3P4 1428 aa27.65■■■□□ 2.02
TSPAN4-214ENST00000525201 MYT1LQ9UL68 1186 aa27.64■■■□□ 2.02
TSPAN4-214ENST00000525201 LOC105371045A0A1W2PR82 267 aa27.63■■■□□ 2.01
TSPAN4-214ENST00000525201 PTPRMP28827 1452 aa27.63■■■□□ 2.01
TSPAN4-214ENST00000525201 MLH3Q9UHC1 1453 aa27.63■■■□□ 2.01
TSPAN4-214ENST00000525201 MADDQ8WXG6 1647 aa27.62■■■□□ 2.01
TSPAN4-214ENST00000525201 AFAP1Q8N556 730 aa27.61■■■□□ 2.01
TSPAN4-214ENST00000525201 CFDP1Q9UEE9 299 aaPredicted RBP27.6■■■□□ 2.01
TSPAN4-214ENST00000525201 SAMD9LQ8IVG5 1584 aa27.59■■■□□ 2.01
TSPAN4-214ENST00000525201 ZNF777Q9ULD5 760 aaPredicted RBP27.58■■■□□ 2.01
TSPAN4-214ENST00000525201 TIAM1Q13009 1591 aa27.57■■■□□ 2
TSPAN4-214ENST00000525201 REREQ9P2R6 1566 aa27.57■■■□□ 2
TSPAN4-214ENST00000525201 KIAA1107Q9UPP5 1409 aa27.57■■■□□ 2
TSPAN4-214ENST00000525201 TRAPPC8Q9Y2L5 1435 aa27.57■■■□□ 2
TSPAN4-214ENST00000525201 SUPT6HQ7KZ85 1726 aaKnown RBP27.56■■■□□ 2
TSPAN4-214ENST00000525201 SYCP2Q9BX26 1530 aa27.56■■■□□ 2
TSPAN4-214ENST00000525201 ARHGEF12Q9NZN5 1544 aa27.56■■■□□ 2
TSPAN4-214ENST00000525201 DIP2CQ9Y2E4 1556 aa27.56■■■□□ 2
TSPAN4-214ENST00000525201 ILDR1Q86SU0 546 aaPredicted RBP27.54■■■□□ 2
TSPAN4-214ENST00000525201 RIMS1Q86UR5 1692 aaKnown RBP27.54■■■□□ 2
TSPAN4-214ENST00000525201 ABCA6Q8N139 1617 aa27.52■■■□□ 2
TSPAN4-214ENST00000525201 MAP3K1Q13233 1512 aa27.51■■□□□ 1.99
TSPAN4-214ENST00000525201 SIGLEC1Q9BZZ2 1709 aa27.5■■□□□ 1.99
TSPAN4-214ENST00000525201 FER1L4A9Z1Z3 1794 aa27.5■■□□□ 1.99
TSPAN4-214ENST00000525201 NCOA2Q15596 1464 aa27.48■■□□□ 1.99
TSPAN4-214ENST00000525201 MLECQ14165 292 aa27.47■■□□□ 1.99
TSPAN4-214ENST00000525201 AGLP35573 1532 aa27.46■■□□□ 1.99
TSPAN4-214ENST00000525201 SPAG9O60271 1321 aaKnown RBP27.46■■□□□ 1.99
TSPAN4-214ENST00000525201 KIDINS220Q9ULH0 1771 aa27.46■■□□□ 1.99
TSPAN4-214ENST00000525201 LRRC9Q6ZRR7 1453 aa27.44■■□□□ 1.98
TSPAN4-214ENST00000525201 ATP7AQ04656 1500 aa27.43■■□□□ 1.98
TSPAN4-214ENST00000525201 HNRNPMP52272 730 aaKnown RBP eCLIP27.43■■□□□ 1.98
TSPAN4-214ENST00000525201 INO80Q9ULG1 1556 aaPredicted RBP27.41■■□□□ 1.98
TSPAN4-214ENST00000525201 APLP2Q06481 763 aa27.4■■□□□ 1.98
TSPAN4-214ENST00000525201 ESF1Q9H501 851 aaKnown RBP27.37■■□□□ 1.97
TSPAN4-214ENST00000525201 RSPH4AQ5TD94 716 aa27.36■■□□□ 1.97
TSPAN4-214ENST00000525201 CAMSAP2Q08AD1 1489 aa27.35■■□□□ 1.97
TSPAN4-214ENST00000525201 CCDC141Q6ZP82 1450 aa27.33■■□□□ 1.97
TSPAN4-214ENST00000525201 MBD5Q9P267 1494 aa27.33■■□□□ 1.97
TSPAN4-214ENST00000525201 RTEL1-TNFRSF6BF6WH68 1400 aa27.33■■□□□ 1.96
TSPAN4-214ENST00000525201 CNTLNQ9NXG0 1405 aa27.33■■□□□ 1.96
TSPAN4-214ENST00000525201 ADGBQ8N7X0 1667 aa27.32■■□□□ 1.96
TSPAN4-214ENST00000525201 A2MP01023 1474 aa27.32■■□□□ 1.96
TSPAN4-214ENST00000525201 ZNF644Q9H582 1327 aaPredicted RBP27.31■■□□□ 1.96
TSPAN4-214ENST00000525201 LMTK3Q96Q04 1460 aa27.3■■□□□ 1.96
TSPAN4-214ENST00000525201 PLXNC1O60486 1568 aa27.3■■□□□ 1.96
TSPAN4-214ENST00000525201 PLPPR3Q6T4P5 718 aa27.28■■□□□ 1.96
TSPAN4-214ENST00000525201 ARHGEF5Q12774 1597 aa27.27■■□□□ 1.96
TSPAN4-214ENST00000525201 MIA2Q96PC5 1412 aa27.27■■□□□ 1.96
TSPAN4-214ENST00000525201 MYOM3Q5VTT5 1437 aa27.25■■□□□ 1.95
TSPAN4-214ENST00000525201 PREX1Q8TCU6 1659 aa27.23■■□□□ 1.95
TSPAN4-214ENST00000525201 KANK4Q5T7N3 995 aaPredicted RBP27.22■■□□□ 1.95
TSPAN4-214ENST00000525201 TSPY4P0CV99 314 aa27.21■■□□□ 1.95
TSPAN4-214ENST00000525201 TSPY10P0CW01 314 aa27.21■■□□□ 1.95
TSPAN4-214ENST00000525201 MROH2AA6NES4 1674 aa27.21■■□□□ 1.95
TSPAN4-214ENST00000525201 C3P01024 1663 aa27.18■■□□□ 1.94
TSPAN4-214ENST00000525201 PPP6R1Q9UPN7 881 aa27.18■■□□□ 1.94
TSPAN4-214ENST00000525201 UHRF1BP1Q6BDS2 1440 aa27.16■■□□□ 1.94
TSPAN4-214ENST00000525201 DHX29Q7Z478 1369 aaKnown RBP27.16■■□□□ 1.94
TSPAN4-214ENST00000525201 CEBPAP49715 358 aaPredicted RBP27.14■■□□□ 1.94
TSPAN4-214ENST00000525201 MAST1Q9Y2H9 1570 aa27.14■■□□□ 1.93
TSPAN4-214ENST00000525201 FAM135AQ9P2D6 1515 aa27.13■■□□□ 1.93
TSPAN4-214ENST00000525201 NPATQ14207 1427 aa27.11■■□□□ 1.93
TSPAN4-214ENST00000525201 SETD1BQ9UPS6 1966 aaKnown RBP27.11■■□□□ 1.93
TSPAN4-214ENST00000525201 GGT6Q6P531 493 aa27.1■■□□□ 1.93
TSPAN4-214ENST00000525201 CLTCQ00610 1675 aaKnown RBP27.08■■□□□ 1.93
TSPAN4-214ENST00000525201 ZMYM3Q14202 1370 aa27.07■■□□□ 1.92
TSPAN4-214ENST00000525201 PTPN23Q9H3S7 1636 aa27.06■■□□□ 1.92
TSPAN4-214ENST00000525201 HSPA2P54652 639 aa27.06■■□□□ 1.92
TSPAN4-214ENST00000525201 FGD6Q6ZV73 1430 aa27.04■■□□□ 1.92
TSPAN4-214ENST00000525201 SHANK2Q9UPX8 1470 aa27.04■■□□□ 1.92
TSPAN4-214ENST00000525201 KIF3BO15066 747 aa27.03■■□□□ 1.92
TSPAN4-214ENST00000525201 KDM5DQ9BY66 1539 aa27.02■■□□□ 1.92
TSPAN4-214ENST00000525201 EIF2AK4Q9P2K8 1649 aaKnown RBP27.01■■□□□ 1.91
TSPAN4-214ENST00000525201 TCOF1Q13428 1488 aaKnown RBP27■■□□□ 1.91
TSPAN4-214ENST00000525201 CROCC2H7BZ55 1655 aa26.99■■□□□ 1.91
TSPAN4-214ENST00000525201 DMRT2Q9Y5R5 561 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms