RNA–Protein interactions for RNA: ENST00000524536.5

USP33-211, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 3

Gene USP33, Length 949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-211ENST00000524536 CFAP74Q9C0B2 1584 aa21.67■■□□□ 1.06
USP33-211ENST00000524536 PRXQ9BXM0 1461 aa21.67■■□□□ 1.06
USP33-211ENST00000524536 PREX1Q8TCU6 1659 aa21.66■■□□□ 1.06
USP33-211ENST00000524536 IQSEC2Q5JU85 1478 aa21.65■■□□□ 1.06
USP33-211ENST00000524536 FER1L4A9Z1Z3 1794 aa21.65■■□□□ 1.06
USP33-211ENST00000524536 RAPGEF6Q8TEU7 1601 aa21.65■■□□□ 1.06
USP33-211ENST00000524536 ATP10AO60312 1499 aa21.64■■□□□ 1.05
USP33-211ENST00000524536 ARHGEF12Q9NZN5 1544 aa21.63■■□□□ 1.05
USP33-211ENST00000524536 STRCQ7RTU9 1775 aa21.62■■□□□ 1.05
USP33-211ENST00000524536 NUP153P49790 1475 aaKnown RBP21.6■■□□□ 1.05
USP33-211ENST00000524536 SCAPERQ9BY12 1400 aa21.6■■□□□ 1.05
USP33-211ENST00000524536 C9orf84Q5VXU9 1444 aa21.59■■□□□ 1.05
USP33-211ENST00000524536 HECW1Q76N89 1606 aa21.58■■□□□ 1.05
USP33-211ENST00000524536 SIGLEC1Q9BZZ2 1709 aa21.58■■□□□ 1.05
USP33-211ENST00000524536 SETD1BQ9UPS6 1966 aaKnown RBP21.57■■□□□ 1.04
USP33-211ENST00000524536 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.56■■□□□ 1.04
USP33-211ENST00000524536 LTBP4Q8N2S1 1624 aa21.55■■□□□ 1.04
USP33-211ENST00000524536 ESF1Q9H501 851 aaKnown RBP21.54■■□□□ 1.04
USP33-211ENST00000524536 SAMD9Q5K651 1589 aa21.53■■□□□ 1.04
USP33-211ENST00000524536 UBAP1LF5GYI3 381 aa21.52■■□□□ 1.04
USP33-211ENST00000524536 EFCAB2Q5VUJ9 269 aa21.52■■□□□ 1.04
USP33-211ENST00000524536 PLCH2O75038 1416 aa21.52■■□□□ 1.04
USP33-211ENST00000524536 TRAPPC8Q9Y2L5 1435 aa21.48■■□□□ 1.03
USP33-211ENST00000524536 MYT1LQ9UL68 1186 aa21.48■■□□□ 1.03
USP33-211ENST00000524536 PPP6R1Q9UPN7 881 aa21.46■■□□□ 1.03
USP33-211ENST00000524536 ADRA2BP18089 450 aa21.44■■□□□ 1.02
USP33-211ENST00000524536 NCOA1Q15788 1441 aa21.44■■□□□ 1.02
USP33-211ENST00000524536 RANGAP1P46060 587 aaPredicted RBP21.43■■□□□ 1.02
USP33-211ENST00000524536 ZNF518AQ6AHZ1 1483 aa21.41■■□□□ 1.02
USP33-211ENST00000524536 AFAP1Q8N556 730 aa21.41■■□□□ 1.02
USP33-211ENST00000524536 CSRNP3Q8WYN3 585 aa21.4■■□□□ 1.02
USP33-211ENST00000524536 ZNF335Q9H4Z2 1342 aaPredicted RBP21.37■■□□□ 1.01
USP33-211ENST00000524536 CDK11AQ9UQ88 783 aaPredicted RBP21.37■■□□□ 1.01
USP33-211ENST00000524536 PKD2Q13563 968 aa21.36■■□□□ 1.01
USP33-211ENST00000524536 CNTLNQ9NXG0 1405 aa21.36■■□□□ 1.01
USP33-211ENST00000524536 NCKAP5LQ9HCH0 1330 aa21.33■■□□□ 1.01
USP33-211ENST00000524536 C3P01024 1663 aa21.32■■□□□ 1
USP33-211ENST00000524536 REREQ9P2R6 1566 aa21.31■■□□□ 1
USP33-211ENST00000524536 AGLP35573 1532 aa21.31■■□□□ 1
USP33-211ENST00000524536 HSPA1LP34931 641 aa21.31■■□□□ 1
USP33-211ENST00000524536 NPATQ14207 1427 aa21.3■■□□□ 1
USP33-211ENST00000524536 CAMSAP1Q5T5Y3 1602 aa21.3■■□□□ 1
USP33-211ENST00000524536 TOM1O60784 492 aa21.3■■□□□ 1
USP33-211ENST00000524536 SCAF1Q9H7N4 1312 aaKnown RBP21.29■■□□□ 1
USP33-211ENST00000524536 KDM5CP41229 1560 aa21.29■■□□□ 1
USP33-211ENST00000524536 MLH3Q9UHC1 1453 aa21.28■■□□□ 1
USP33-211ENST00000524536 PIAS4Q8N2W9 510 aaPredicted RBP21.28■■□□□ 1
USP33-211ENST00000524536 CDK13Q14004 1512 aaKnown RBP21.26■□□□□ 0.99
USP33-211ENST00000524536 PIP4K2BP78356 416 aa21.26■□□□□ 0.99
USP33-211ENST00000524536 ATP1B4Q9UN42 357 aaPredicted RBP21.26■□□□□ 0.99
USP33-211ENST00000524536 DIP2CQ9Y2E4 1556 aa21.26■□□□□ 0.99
USP33-211ENST00000524536 MED1Q15648 1581 aaPredicted RBP21.25■□□□□ 0.99
USP33-211ENST00000524536 ZMYM3Q14202 1370 aa21.23■□□□□ 0.99
USP33-211ENST00000524536 MYO5CQ9NQX4 1742 aa21.23■□□□□ 0.99
USP33-211ENST00000524536 ARHGAP5Q13017 1502 aa21.23■□□□□ 0.99
USP33-211ENST00000524536 PLA2R1Q13018 1463 aa21.22■□□□□ 0.99
USP33-211ENST00000524536 TCOF1Q13428 1488 aaKnown RBP21.16■□□□□ 0.98
USP33-211ENST00000524536 CLIP1P30622 1438 aa21.16■□□□□ 0.98
USP33-211ENST00000524536 ABCA6Q8N139 1617 aa21.15■□□□□ 0.98
USP33-211ENST00000524536 TROQ12816 1431 aaPredicted RBP21.14■□□□□ 0.98
USP33-211ENST00000524536 FMN1Q68DA7 1419 aa21.13■□□□□ 0.97
USP33-211ENST00000524536 KIF14Q15058 1648 aa21.13■□□□□ 0.97
USP33-211ENST00000524536 EEA1Q15075 1411 aa21.11■□□□□ 0.97
USP33-211ENST00000524536 MROH2AA6NES4 1674 aa21.1■□□□□ 0.97
USP33-211ENST00000524536 PTPRKQ15262 1439 aa21.1■□□□□ 0.97
USP33-211ENST00000524536 CPS1P31327 1500 aa21.09■□□□□ 0.97
USP33-211ENST00000524536 POTEDQ86YR6 584 aa21.09■□□□□ 0.97
USP33-211ENST00000524536 CEP170BQ9Y4F5 1589 aaPredicted RBP21.06■□□□□ 0.96
USP33-211ENST00000524536 SHANK2Q9UPX8 1470 aa21.04■□□□□ 0.96
USP33-211ENST00000524536 SPAG9O60271 1321 aaKnown RBP21.04■□□□□ 0.96
USP33-211ENST00000524536 ZNF142P52746 1687 aaPredicted RBP21.03■□□□□ 0.96
USP33-211ENST00000524536 MSH5O43196 834 aa21.03■□□□□ 0.96
USP33-211ENST00000524536 ABCC1P33527 1531 aa21.03■□□□□ 0.96
USP33-211ENST00000524536 GGT6Q6P531 493 aa21.02■□□□□ 0.96
USP33-211ENST00000524536 KIDINS220Q9ULH0 1771 aa21.02■□□□□ 0.96
USP33-211ENST00000524536 MYO3AQ8NEV4 1616 aa21.01■□□□□ 0.95
USP33-211ENST00000524536 A2ML1A8K2U0 1454 aa20.99■□□□□ 0.95
USP33-211ENST00000524536 SUPT6HQ7KZ85 1726 aaKnown RBP20.98■□□□□ 0.95
USP33-211ENST00000524536 CDC42BPBQ9Y5S2 1711 aa20.98■□□□□ 0.95
USP33-211ENST00000524536 ANKLE2Q86XL3 938 aa20.98■□□□□ 0.95
USP33-211ENST00000524536 ZNF777Q9ULD5 760 aaPredicted RBP20.97■□□□□ 0.95
USP33-211ENST00000524536 UBTFP17480 764 aaKnown RBP20.95■□□□□ 0.94
USP33-211ENST00000524536 ITSN2Q9NZM3 1697 aa20.95■□□□□ 0.94
USP33-211ENST00000524536 THEMISQ8N1K5 641 aaPredicted RBP20.94■□□□□ 0.94
USP33-211ENST00000524536 RGS17Q9UGC6 210 aaPredicted RBP20.94■□□□□ 0.94
USP33-211ENST00000524536 SAMD9LQ8IVG5 1584 aa20.93■□□□□ 0.94
USP33-211ENST00000524536 PREX2Q70Z35 1606 aa20.93■□□□□ 0.94
USP33-211ENST00000524536 CLTCQ00610 1675 aaKnown RBP20.93■□□□□ 0.94
USP33-211ENST00000524536 HNRNPMP52272 730 aaKnown RBP eCLIP20.93■□□□□ 0.943e-7■■■■□ 22
USP33-211ENST00000524536 A2MP01023 1474 aa20.93■□□□□ 0.94
USP33-211ENST00000524536 DNMT1P26358 1616 aaKnown RBP20.92■□□□□ 0.94
USP33-211ENST00000524536 ARHGAP35Q9NRY4 1499 aa20.89■□□□□ 0.94
USP33-211ENST00000524536 TNRQ92752 1358 aa20.86■□□□□ 0.93
USP33-211ENST00000524536 KIAA1107Q9UPP5 1409 aa20.86■□□□□ 0.93
USP33-211ENST00000524536 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.85■□□□□ 0.93
USP33-211ENST00000524536 PLXNC1O60486 1568 aa20.85■□□□□ 0.93
USP33-211ENST00000524536 NEURL4Q96JN8 1562 aa20.85■□□□□ 0.93
USP33-211ENST00000524536 ATP7AQ04656 1500 aa20.84■□□□□ 0.93
USP33-211ENST00000524536 FBXO31Q5XUX0 539 aaPredicted RBP20.84■□□□□ 0.93
USP33-211ENST00000524536 ALKQ9UM73 1620 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms