RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SUPT6HQ7KZ85 1726 aaKnown RBP19.82■□□□□ 0.76
VEGFA-225ENST00000523950 DENND4BO75064 1496 aaPredicted RBP19.81■□□□□ 0.76
VEGFA-225ENST00000523950 RICTORQ6R327 1708 aa19.81■□□□□ 0.76
VEGFA-225ENST00000523950 ADGRL1O94910 1474 aa19.8■□□□□ 0.76
VEGFA-225ENST00000523950 ITSN2Q9NZM3 1697 aa19.8■□□□□ 0.76
VEGFA-225ENST00000523950 LRRC9Q6ZRR7 1453 aa19.79■□□□□ 0.76
VEGFA-225ENST00000523950 FRMPD1Q5SYB0 1578 aa19.79■□□□□ 0.76
VEGFA-225ENST00000523950 GPATCH8Q9UKJ3 1502 aaKnown RBP19.79■□□□□ 0.76
VEGFA-225ENST00000523950 CCNB3Q8WWL7 1395 aa19.77■□□□□ 0.76
VEGFA-225ENST00000523950 APLP2Q06481 763 aa19.76■□□□□ 0.75
VEGFA-225ENST00000523950 ZMYM4Q5VZL5 1548 aa19.76■□□□□ 0.75
VEGFA-225ENST00000523950 SCAPERQ9BY12 1400 aa19.76■□□□□ 0.75
VEGFA-225ENST00000523950 POGZQ7Z3K3 1410 aa19.75■□□□□ 0.75
VEGFA-225ENST00000523950 NCOA2Q15596 1464 aa19.74■□□□□ 0.75
VEGFA-225ENST00000523950 ABCC1P33527 1531 aa19.74■□□□□ 0.75
VEGFA-225ENST00000523950 RAPGEF3O95398 923 aa19.73■□□□□ 0.75
VEGFA-225ENST00000523950 MAGI2Q86UL8 1455 aa19.72■□□□□ 0.75
VEGFA-225ENST00000523950 ZNF518AQ6AHZ1 1483 aa19.71■□□□□ 0.75
VEGFA-225ENST00000523950 PLEKHH2Q8IVE3 1493 aa19.71■□□□□ 0.75
VEGFA-225ENST00000523950 SAMD9LQ8IVG5 1584 aa19.7■□□□□ 0.74
VEGFA-225ENST00000523950 CFDP1Q9UEE9 299 aaPredicted RBP19.69■□□□□ 0.74
VEGFA-225ENST00000523950 KDM5CP41229 1560 aa19.69■□□□□ 0.74
VEGFA-225ENST00000523950 ARHGEF40Q8TER5 1519 aa19.68■□□□□ 0.74
VEGFA-225ENST00000523950 KANK4Q5T7N3 995 aaPredicted RBP19.67■□□□□ 0.74
VEGFA-225ENST00000523950 KIAA1107Q9UPP5 1409 aa19.67■□□□□ 0.74
VEGFA-225ENST00000523950 ZFYVE16Q7Z3T8 1539 aa19.66■□□□□ 0.74
VEGFA-225ENST00000523950 SYCP2Q9BX26 1530 aa19.64■□□□□ 0.73
VEGFA-225ENST00000523950 ARHGEF12Q9NZN5 1544 aa19.64■□□□□ 0.73
VEGFA-225ENST00000523950 HECW2Q9P2P5 1572 aa19.64■□□□□ 0.73
VEGFA-225ENST00000523950 ZNF777Q9ULD5 760 aaPredicted RBP19.63■□□□□ 0.73
VEGFA-225ENST00000523950 MLH3Q9UHC1 1453 aa19.61■□□□□ 0.73
VEGFA-225ENST00000523950 TRAPPC8Q9Y2L5 1435 aa19.61■□□□□ 0.73
VEGFA-225ENST00000523950 MYOM3Q5VTT5 1437 aa19.6■□□□□ 0.73
VEGFA-225ENST00000523950 MIA2Q96PC5 1412 aa19.6■□□□□ 0.73
VEGFA-225ENST00000523950 AFAP1Q8N556 730 aa19.58■□□□□ 0.72
VEGFA-225ENST00000523950 CAMSAP2Q08AD1 1489 aa19.58■□□□□ 0.72
VEGFA-225ENST00000523950 YEATS2Q9ULM3 1422 aa19.58■□□□□ 0.72
VEGFA-225ENST00000523950 ATP10AO60312 1499 aa19.55■□□□□ 0.72
VEGFA-225ENST00000523950 MBD5Q9P267 1494 aa19.55■□□□□ 0.72
VEGFA-225ENST00000523950 KIDINS220Q9ULH0 1771 aa19.55■□□□□ 0.72
VEGFA-225ENST00000523950 REREQ9P2R6 1566 aa19.55■□□□□ 0.72
VEGFA-225ENST00000523950 ARHGEF5Q12774 1597 aa19.54■□□□□ 0.72
VEGFA-225ENST00000523950 DIP2CQ9Y2E4 1556 aa19.54■□□□□ 0.72
VEGFA-225ENST00000523950 C9orf84Q5VXU9 1444 aa19.54■□□□□ 0.72
VEGFA-225ENST00000523950 HNRNPMP52272 730 aaKnown RBP eCLIP19.54■□□□□ 0.721e-12■■■■■ 34.3
VEGFA-225ENST00000523950 RSPH4AQ5TD94 716 aa19.54■□□□□ 0.72
VEGFA-225ENST00000523950 INO80Q9ULG1 1556 aaPredicted RBP19.53■□□□□ 0.72
VEGFA-225ENST00000523950 ABCA6Q8N139 1617 aa19.53■□□□□ 0.72
VEGFA-225ENST00000523950 CCDC141Q6ZP82 1450 aa19.53■□□□□ 0.72
VEGFA-225ENST00000523950 ZNF644Q9H582 1327 aaPredicted RBP19.52■□□□□ 0.72
VEGFA-225ENST00000523950 SPAG9O60271 1321 aaKnown RBP19.51■□□□□ 0.71
VEGFA-225ENST00000523950 ATP7AQ04656 1500 aa19.51■□□□□ 0.71
VEGFA-225ENST00000523950 MYT1LQ9UL68 1186 aa19.51■□□□□ 0.71
VEGFA-225ENST00000523950 BCORL1Q5H9F3 1711 aa19.51■□□□□ 0.71
VEGFA-225ENST00000523950 KDM4FA0A1W2PPD8 638 aa19.5■□□□□ 0.71
VEGFA-225ENST00000523950 PTPN23Q9H3S7 1636 aa19.49■□□□□ 0.71
VEGFA-225ENST00000523950 RTEL1-TNFRSF6BF6WH68 1400 aa19.49■□□□□ 0.71
VEGFA-225ENST00000523950 FGD6Q6ZV73 1430 aa19.49■□□□□ 0.71
VEGFA-225ENST00000523950 ADAMTSL3P82987 1691 aa19.48■□□□□ 0.71
VEGFA-225ENST00000523950 SIGLEC1Q9BZZ2 1709 aa19.48■□□□□ 0.71
VEGFA-225ENST00000523950 ARID4BQ4LE39 1312 aaPredicted RBP19.47■□□□□ 0.71
VEGFA-225ENST00000523950 TCOF1Q13428 1488 aaKnown RBP19.47■□□□□ 0.71
VEGFA-225ENST00000523950 AGLP35573 1532 aa19.46■□□□□ 0.71
VEGFA-225ENST00000523950 ADGBQ8N7X0 1667 aa19.46■□□□□ 0.71
VEGFA-225ENST00000523950 MAST1Q9Y2H9 1570 aa19.45■□□□□ 0.7
VEGFA-225ENST00000523950 AEBP2Q6ZN18 517 aaPredicted RBP19.45■□□□□ 0.7
VEGFA-225ENST00000523950 PLXNC1O60486 1568 aa19.41■□□□□ 0.7
VEGFA-225ENST00000523950 CROCC2H7BZ55 1655 aa19.41■□□□□ 0.7
VEGFA-225ENST00000523950 TSPY4P0CV99 314 aa19.41■□□□□ 0.7
VEGFA-225ENST00000523950 TSPY10P0CW01 314 aa19.41■□□□□ 0.7
VEGFA-225ENST00000523950 A2MP01023 1474 aa19.41■□□□□ 0.7
VEGFA-225ENST00000523950 DNMT1P26358 1616 aaKnown RBP19.4■□□□□ 0.7
VEGFA-225ENST00000523950 SHANK2Q9UPX8 1470 aa19.4■□□□□ 0.7
VEGFA-225ENST00000523950 MADDQ8WXG6 1647 aa19.4■□□□□ 0.7
VEGFA-225ENST00000523950 FER1L4A9Z1Z3 1794 aa19.37■□□□□ 0.69
VEGFA-225ENST00000523950 ABCC5O15440 1437 aa19.35■□□□□ 0.69
VEGFA-225ENST00000523950 DAPK1P53355 1430 aa19.35■□□□□ 0.69
VEGFA-225ENST00000523950 RIMS1Q86UR5 1692 aaKnown RBP19.35■□□□□ 0.69
VEGFA-225ENST00000523950 DHX29Q7Z478 1369 aaKnown RBP19.33■□□□□ 0.69
VEGFA-225ENST00000523950 PTPRMP28827 1452 aa19.33■□□□□ 0.68
VEGFA-225ENST00000523950 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.32■□□□□ 0.683e-7■■■□□ 14.6
VEGFA-225ENST00000523950 MLECQ14165 292 aa19.31■□□□□ 0.68
VEGFA-225ENST00000523950 EIF2AK4Q9P2K8 1649 aaKnown RBP19.29■□□□□ 0.68
VEGFA-225ENST00000523950 CNTLNQ9NXG0 1405 aa19.28■□□□□ 0.68
VEGFA-225ENST00000523950 FAM50AQ14320 339 aaKnown RBP19.28■□□□□ 0.68
VEGFA-225ENST00000523950 DUOX2Q9NRD8 1548 aa19.28■□□□□ 0.68
VEGFA-225ENST00000523950 PPARGC1BQ86YN6 1023 aaKnown RBP19.27■□□□□ 0.68
VEGFA-225ENST00000523950 ADGRL2O95490 1459 aa19.27■□□□□ 0.67
VEGFA-225ENST00000523950 FAM135AQ9P2D6 1515 aa19.26■□□□□ 0.67
VEGFA-225ENST00000523950 PPP6R1Q9UPN7 881 aa19.26■□□□□ 0.67
VEGFA-225ENST00000523950 MROH2AA6NES4 1674 aa19.26■□□□□ 0.67
VEGFA-225ENST00000523950 RRBP1Q9P2E9 1410 aaKnown RBP19.25■□□□□ 0.67
VEGFA-225ENST00000523950 ANKRD30AQ9BXX3 1397 aa19.25■□□□□ 0.67
VEGFA-225ENST00000523950 KIF15Q9NS87 1388 aa19.24■□□□□ 0.67
VEGFA-225ENST00000523950 ESF1Q9H501 851 aaKnown RBP19.24■□□□□ 0.67
VEGFA-225ENST00000523950 RNF17Q9BXT8 1623 aaKnown RBP19.23■□□□□ 0.67
VEGFA-225ENST00000523950 ERBINQ96RT1 1412 aa19.23■□□□□ 0.67
VEGFA-225ENST00000523950 NCOA1Q15788 1441 aa19.22■□□□□ 0.67
VEGFA-225ENST00000523950 KIF3BO15066 747 aa19.2■□□□□ 0.66
VEGFA-225ENST00000523950 C3P01024 1663 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms