RNA–Protein interactions for RNA: ENST00000523931.1

NDRG1-228, Transcript of N-myc downstream regulated 1, humanhuman

TSL 3

Gene NDRG1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-228ENST00000523931 MAGI2Q86UL8 1455 aa17.05■□□□□ 0.32
NDRG1-228ENST00000523931 PTPRTO14522 1441 aa17.05■□□□□ 0.32
NDRG1-228ENST00000523931 ARHGEF12Q9NZN5 1544 aa17.05■□□□□ 0.32
NDRG1-228ENST00000523931 LTBP4Q8N2S1 1624 aa17.03■□□□□ 0.32
NDRG1-228ENST00000523931 RAPGEF6Q8TEU7 1601 aa17.03■□□□□ 0.32
NDRG1-228ENST00000523931 SETD1BQ9UPS6 1966 aaKnown RBP17.02■□□□□ 0.31
NDRG1-228ENST00000523931 HECW1Q76N89 1606 aa17.01■□□□□ 0.31
NDRG1-228ENST00000523931 C9orf84Q5VXU9 1444 aa16.97■□□□□ 0.31
NDRG1-228ENST00000523931 ATP10AO60312 1499 aa16.97■□□□□ 0.31
NDRG1-228ENST00000523931 PLEKHD1A6NEE1 506 aa16.96■□□□□ 0.31
NDRG1-228ENST00000523931 UBAP1LF5GYI3 381 aa16.96■□□□□ 0.31
NDRG1-228ENST00000523931 NUP153P49790 1475 aaKnown RBP16.96■□□□□ 0.31
NDRG1-228ENST00000523931 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.95■□□□□ 0.3
NDRG1-228ENST00000523931 SCAPERQ9BY12 1400 aa16.93■□□□□ 0.3
NDRG1-228ENST00000523931 PRXQ9BXM0 1461 aa16.92■□□□□ 0.3
NDRG1-228ENST00000523931 SAMD9Q5K651 1589 aa16.91■□□□□ 0.3
NDRG1-228ENST00000523931 NCOA1Q15788 1441 aa16.9■□□□□ 0.3
NDRG1-228ENST00000523931 MED1Q15648 1581 aaPredicted RBP16.89■□□□□ 0.3
NDRG1-228ENST00000523931 C3P01024 1663 aa16.87■□□□□ 0.29
NDRG1-228ENST00000523931 ESF1Q9H501 851 aaKnown RBP16.85■□□□□ 0.29
NDRG1-228ENST00000523931 ZNF335Q9H4Z2 1342 aaPredicted RBP16.85■□□□□ 0.29
NDRG1-228ENST00000523931 TRAPPC8Q9Y2L5 1435 aa16.84■□□□□ 0.29
NDRG1-228ENST00000523931 PLCH2O75038 1416 aa16.83■□□□□ 0.28
NDRG1-228ENST00000523931 SCAF1Q9H7N4 1312 aaKnown RBP16.82■□□□□ 0.28
NDRG1-228ENST00000523931 CAMSAP1Q5T5Y3 1602 aa16.81■□□□□ 0.28
NDRG1-228ENST00000523931 PHF23Q9BUL5 403 aaPredicted RBP16.81■□□□□ 0.28
NDRG1-228ENST00000523931 MYT1LQ9UL68 1186 aa16.81■□□□□ 0.28
NDRG1-228ENST00000523931 HSPA1LP34931 641 aa16.8■□□□□ 0.28
NDRG1-228ENST00000523931 ZNF518AQ6AHZ1 1483 aa16.8■□□□□ 0.28
NDRG1-228ENST00000523931 EFCAB2Q5VUJ9 269 aa16.79■□□□□ 0.28
NDRG1-228ENST00000523931 RANGAP1P46060 587 aaPredicted RBP16.78■□□□□ 0.28
NDRG1-228ENST00000523931 DIP2CQ9Y2E4 1556 aa16.77■□□□□ 0.28
NDRG1-228ENST00000523931 NCKAP5LQ9HCH0 1330 aa16.77■□□□□ 0.28
NDRG1-228ENST00000523931 PIP4K2BP78356 416 aa16.76■□□□□ 0.27
NDRG1-228ENST00000523931 REREQ9P2R6 1566 aa16.76■□□□□ 0.27
NDRG1-228ENST00000523931 MYO5CQ9NQX4 1742 aa16.76■□□□□ 0.27
NDRG1-228ENST00000523931 KDM5CP41229 1560 aa16.75■□□□□ 0.27
NDRG1-228ENST00000523931 CNTLNQ9NXG0 1405 aa16.74■□□□□ 0.27
NDRG1-228ENST00000523931 AFAP1Q8N556 730 aa16.74■□□□□ 0.27
NDRG1-228ENST00000523931 CDK13Q14004 1512 aaKnown RBP16.74■□□□□ 0.27
NDRG1-228ENST00000523931 AGLP35573 1532 aa16.73■□□□□ 0.27
NDRG1-228ENST00000523931 ABCA6Q8N139 1617 aa16.72■□□□□ 0.27
NDRG1-228ENST00000523931 NPATQ14207 1427 aa16.71■□□□□ 0.27
NDRG1-228ENST00000523931 PKD2Q13563 968 aa16.71■□□□□ 0.27
NDRG1-228ENST00000523931 TOM1O60784 492 aa16.7■□□□□ 0.26
NDRG1-228ENST00000523931 ARHGAP5Q13017 1502 aa16.69■□□□□ 0.26
NDRG1-228ENST00000523931 PLA2R1Q13018 1463 aa16.68■□□□□ 0.26
NDRG1-228ENST00000523931 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
NDRG1-228ENST00000523931 PPP6R1Q9UPN7 881 aa16.67■□□□□ 0.26
NDRG1-228ENST00000523931 MLH3Q9UHC1 1453 aa16.67■□□□□ 0.26
NDRG1-228ENST00000523931 TCOF1Q13428 1488 aaKnown RBP16.66■□□□□ 0.26
NDRG1-228ENST00000523931 MROH2AA6NES4 1674 aa16.65■□□□□ 0.26
NDRG1-228ENST00000523931 ZNF142P52746 1687 aaPredicted RBP16.65■□□□□ 0.26
NDRG1-228ENST00000523931 MYO3AQ8NEV4 1616 aa16.63■□□□□ 0.25
NDRG1-228ENST00000523931 CEP170BQ9Y4F5 1589 aaPredicted RBP16.63■□□□□ 0.25
NDRG1-228ENST00000523931 ZMYM3Q14202 1370 aa16.63■□□□□ 0.25
NDRG1-228ENST00000523931 KIF14Q15058 1648 aa16.63■□□□□ 0.25
NDRG1-228ENST00000523931 CPS1P31327 1500 aa16.61■□□□□ 0.25
NDRG1-228ENST00000523931 ATP1B4Q9UN42 357 aaPredicted RBP16.61■□□□□ 0.25
NDRG1-228ENST00000523931 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
NDRG1-228ENST00000523931 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
NDRG1-228ENST00000523931 PTPRKQ15262 1439 aa16.57■□□□□ 0.24
NDRG1-228ENST00000523931 SENP3Q9H4L4 574 aaPredicted RBP16.57■□□□□ 0.24
NDRG1-228ENST00000523931 KIDINS220Q9ULH0 1771 aa16.56■□□□□ 0.24
NDRG1-228ENST00000523931 ABCC1P33527 1531 aa16.55■□□□□ 0.24
NDRG1-228ENST00000523931 SHANK2Q9UPX8 1470 aa16.55■□□□□ 0.24
NDRG1-228ENST00000523931 CLIP1P30622 1438 aa16.55■□□□□ 0.24
NDRG1-228ENST00000523931 CLTCQ00610 1675 aaKnown RBP16.55■□□□□ 0.24
NDRG1-228ENST00000523931 TROQ12816 1431 aaPredicted RBP16.54■□□□□ 0.24
NDRG1-228ENST00000523931 CDC42BPBQ9Y5S2 1711 aa16.54■□□□□ 0.24
NDRG1-228ENST00000523931 ITSN2Q9NZM3 1697 aa16.54■□□□□ 0.24
NDRG1-228ENST00000523931 POLR1AO95602 1720 aaPredicted RBP16.51■□□□□ 0.23
NDRG1-228ENST00000523931 RGS17Q9UGC6 210 aaPredicted RBP16.51■□□□□ 0.23
NDRG1-228ENST00000523931 A2ML1A8K2U0 1454 aa16.5■□□□□ 0.23
NDRG1-228ENST00000523931 PREX2Q70Z35 1606 aa16.5■□□□□ 0.23
NDRG1-228ENST00000523931 ALKQ9UM73 1620 aa16.5■□□□□ 0.23
NDRG1-228ENST00000523931 DNMT1P26358 1616 aaKnown RBP16.48■□□□□ 0.23
NDRG1-228ENST00000523931 NEURL4Q96JN8 1562 aa16.48■□□□□ 0.23
NDRG1-228ENST00000523931 FMN1Q68DA7 1419 aa16.48■□□□□ 0.23
NDRG1-228ENST00000523931 SAMD9LQ8IVG5 1584 aa16.46■□□□□ 0.23
NDRG1-228ENST00000523931 VWDEQ8N2E2 1590 aa16.46■□□□□ 0.23
NDRG1-228ENST00000523931 SPAG9O60271 1321 aaKnown RBP16.45■□□□□ 0.22
NDRG1-228ENST00000523931 GGT6Q6P531 493 aa16.44■□□□□ 0.22
NDRG1-228ENST00000523931 ANKLE2Q86XL3 938 aa16.41■□□□□ 0.22
NDRG1-228ENST00000523931 PLXNC1O60486 1568 aa16.41■□□□□ 0.22
NDRG1-228ENST00000523931 A2MP01023 1474 aa16.41■□□□□ 0.22
NDRG1-228ENST00000523931 RNF17Q9BXT8 1623 aaKnown RBP16.41■□□□□ 0.22
NDRG1-228ENST00000523931 ATP7AQ04656 1500 aa16.4■□□□□ 0.22
NDRG1-228ENST00000523931 POTEAQ6S8J7 498 aa16.4■□□□□ 0.22
NDRG1-228ENST00000523931 ZNF777Q9ULD5 760 aaPredicted RBP16.4■□□□□ 0.22
NDRG1-228ENST00000523931 EEA1Q15075 1411 aa16.39■□□□□ 0.21
NDRG1-228ENST00000523931 SYCP2Q9BX26 1530 aa16.39■□□□□ 0.21
NDRG1-228ENST00000523931 TNRQ92752 1358 aa16.38■□□□□ 0.21
NDRG1-228ENST00000523931 NPHP4O75161 1426 aaPredicted RBP16.38■□□□□ 0.21
NDRG1-228ENST00000523931 CDC42BPAQ5VT25 1732 aa16.38■□□□□ 0.21
NDRG1-228ENST00000523931 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.38■□□□□ 0.21
NDRG1-228ENST00000523931 LRRIQ1Q96JM4 1722 aa16.37■□□□□ 0.21
NDRG1-228ENST00000523931 LRRC7Q96NW7 1537 aa16.37■□□□□ 0.21
NDRG1-228ENST00000523931 SETD1AO15047 1707 aaKnown RBP16.36■□□□□ 0.21
NDRG1-228ENST00000523931 SYNMO15061 1565 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms