RNA–Protein interactions for RNA: ENST00000523647.1

SMARCE1P4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4, humanhuman

BASIC

Gene SMARCE1P4, Length 241 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P4-201ENST00000523647 CRISPLD2Q9H0B8 497 aa10.36□□□□□ -0.75
SMARCE1P4-201ENST00000523647 NCKAP5LQ9HCH0 1330 aa10.35□□□□□ -0.75
SMARCE1P4-201ENST00000523647 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.35□□□□□ -0.75
SMARCE1P4-201ENST00000523647 KIF3CO14782 793 aa10.34□□□□□ -0.75
SMARCE1P4-201ENST00000523647 SCUBE2Q9NQ36 999 aa10.34□□□□□ -0.75
SMARCE1P4-201ENST00000523647 OTUD5Q96G74 571 aa10.32□□□□□ -0.76
SMARCE1P4-201ENST00000523647 GPHNQ9NQX3 736 aaPredicted RBP10.31□□□□□ -0.76
SMARCE1P4-201ENST00000523647 PDE4AP27815 886 aa10.3□□□□□ -0.76
SMARCE1P4-201ENST00000523647 MFSD10Q14728 455 aa10.3□□□□□ -0.76
SMARCE1P4-201ENST00000523647 C2orf72A6NCS6 295 aa10.29□□□□□ -0.76
SMARCE1P4-201ENST00000523647 VSIG10Q8N0Z9 540 aa10.29□□□□□ -0.76
SMARCE1P4-201ENST00000523647 TMC2Q8TDI7 906 aa10.29□□□□□ -0.76
SMARCE1P4-201ENST00000523647 KDM2AQ9Y2K7 1162 aa10.27□□□□□ -0.77
SMARCE1P4-201ENST00000523647 FOXK1P85037 733 aa10.26□□□□□ -0.77
SMARCE1P4-201ENST00000523647 SLAIN1Q8ND83 568 aa10.26□□□□□ -0.77
SMARCE1P4-201ENST00000523647 LARP6Q9BRS8 491 aaKnown RBP10.26□□□□□ -0.77
SMARCE1P4-201ENST00000523647 DSG2Q14126 1118 aa10.24□□□□□ -0.77
SMARCE1P4-201ENST00000523647 DDX27Q96GQ7 796 aaKnown RBP10.24□□□□□ -0.77
SMARCE1P4-201ENST00000523647 PPP1R15BQ5SWA1 713 aa10.23□□□□□ -0.77
SMARCE1P4-201ENST00000523647 PLPP6Q8IY26 295 aa10.2□□□□□ -0.78
SMARCE1P4-201ENST00000523647 WDR70Q9NW82 654 aa10.18□□□□□ -0.78
SMARCE1P4-201ENST00000523647 CAMK2BQ13554 666 aa10.17□□□□□ -0.78
SMARCE1P4-201ENST00000523647 HOXB3P14651 431 aaPredicted RBP10.14□□□□□ -0.79
SMARCE1P4-201ENST00000523647 E2F4Q16254 413 aa10.14□□□□□ -0.79
SMARCE1P4-201ENST00000523647 SLC34A2O95436 690 aa10.13□□□□□ -0.79
SMARCE1P4-201ENST00000523647 KCNV2Q8TDN2 545 aa10.11□□□□□ -0.79
SMARCE1P4-201ENST00000523647 EMILIN3Q9NT22 766 aa10.11□□□□□ -0.79
SMARCE1P4-201ENST00000523647 SNPHO15079 494 aa10.1□□□□□ -0.79
SMARCE1P4-201ENST00000523647 DOK7Q18PE1 504 aa10.1□□□□□ -0.79
SMARCE1P4-201ENST00000523647 P3H3Q8IVL6 736 aa10.1□□□□□ -0.79
SMARCE1P4-201ENST00000523647 ARIH1Q9Y4X5 557 aaPredicted RBP10.1□□□□□ -0.79
SMARCE1P4-201ENST00000523647 OXER1Q8TDS5 423 aa10.09□□□□□ -0.79
SMARCE1P4-201ENST00000523647 PTCD2Q8WV60 388 aaKnown RBP10.09□□□□□ -0.79
SMARCE1P4-201ENST00000523647 ZSWIM6Q9HCJ5 1215 aa10.06□□□□□ -0.8
SMARCE1P4-201ENST00000523647 ARHGEF1Q92888 912 aaKnown RBP10.05□□□□□ -0.8
SMARCE1P4-201ENST00000523647 RIMBP2O15034 1052 aa10.04□□□□□ -0.8
SMARCE1P4-201ENST00000523647 UPF1Q92900 1129 aaKnown RBP eCLIP10.04□□□□□ -0.8
SMARCE1P4-201ENST00000523647 PCDHGA4Q9Y5G9 962 aa10.03□□□□□ -0.8
SMARCE1P4-201ENST00000523647 DPYSL4O14531 572 aa10.02□□□□□ -0.81
SMARCE1P4-201ENST00000523647 GPR153Q6NV75 609 aa10.02□□□□□ -0.81
SMARCE1P4-201ENST00000523647 ZNF710Q8N1W2 664 aa10.02□□□□□ -0.81
SMARCE1P4-201ENST00000523647 KDM4FA0A1W2PPD8 638 aa10□□□□□ -0.81
SMARCE1P4-201ENST00000523647 TBC1D12O60347 775 aa10□□□□□ -0.81
SMARCE1P4-201ENST00000523647 HOXB1P14653 301 aaPredicted RBP9.99□□□□□ -0.81
SMARCE1P4-201ENST00000523647 MAP3K9P80192 1104 aa9.99□□□□□ -0.81
SMARCE1P4-201ENST00000523647 PDIA6Q15084 440 aa9.99□□□□□ -0.81
SMARCE1P4-201ENST00000523647 ARSIQ5FYB1 569 aa9.99□□□□□ -0.81
SMARCE1P4-201ENST00000523647 ST18O60284 1047 aa9.98□□□□□ -0.81
SMARCE1P4-201ENST00000523647 LCE2DQ5TA82 110 aaPredicted RBP9.98□□□□□ -0.81
SMARCE1P4-201ENST00000523647 KHSRPQ92945 711 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMARCE1P4-201ENST00000523647 SPDYE16A6NNV3 312 aaPredicted RBP9.96□□□□□ -0.82
SMARCE1P4-201ENST00000523647 EVI5O60447 810 aa9.95□□□□□ -0.82
SMARCE1P4-201ENST00000523647 ANO8Q9HCE9 1232 aaPredicted RBP9.95□□□□□ -0.82
SMARCE1P4-201ENST00000523647 NUDT7P0C024 238 aa9.94□□□□□ -0.82
SMARCE1P4-201ENST00000523647 FAM163AQ96GL9 167 aaPredicted RBP9.93□□□□□ -0.82
SMARCE1P4-201ENST00000523647 ZNF316A6NFI3 1004 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1P4-201ENST00000523647 PTGER2P43116 358 aa9.9□□□□□ -0.82
SMARCE1P4-201ENST00000523647 SEMA3EO15041 775 aa9.88□□□□□ -0.83
SMARCE1P4-201ENST00000523647 NBR1Q14596 966 aa9.87□□□□□ -0.83
SMARCE1P4-201ENST00000523647 MARVELD3Q96A59 401 aa9.87□□□□□ -0.83
SMARCE1P4-201ENST00000523647 LHX6Q9UPM6 363 aa9.87□□□□□ -0.83
SMARCE1P4-201ENST00000523647 TESPA1A2RU30 521 aaPredicted RBP9.86□□□□□ -0.83
SMARCE1P4-201ENST00000523647 EMP3P54852 163 aa9.86□□□□□ -0.83
SMARCE1P4-201ENST00000523647 JPH4Q96JJ6 628 aa9.86□□□□□ -0.83
SMARCE1P4-201ENST00000523647 FOSBP53539 338 aa9.85□□□□□ -0.83
SMARCE1P4-201ENST00000523647 PSDA5PKW4 1024 aaPredicted RBP9.84□□□□□ -0.83
SMARCE1P4-201ENST00000523647 MLLT3P42568 568 aaPredicted RBP9.84□□□□□ -0.83
SMARCE1P4-201ENST00000523647 BCANQ96GW7 911 aa9.84□□□□□ -0.83
SMARCE1P4-201ENST00000523647 DDX12PQ92771 950 aa9.83□□□□□ -0.84
SMARCE1P4-201ENST00000523647 PHF14O94880 888 aa9.82□□□□□ -0.84
SMARCE1P4-201ENST00000523647 PCDHGA10Q9Y5H3 936 aa9.82□□□□□ -0.84
SMARCE1P4-201ENST00000523647 ERBB3P21860 1342 aa9.81□□□□□ -0.84
SMARCE1P4-201ENST00000523647 VARS2Q5ST30 1063 aaKnown RBP9.8□□□□□ -0.84
SMARCE1P4-201ENST00000523647 ZNF454Q8N9F8 522 aa9.8□□□□□ -0.84
SMARCE1P4-201ENST00000523647 EPAS1Q99814 870 aa9.8□□□□□ -0.84
SMARCE1P4-201ENST00000523647 POTEB3A0JP26 581 aa9.79□□□□□ -0.84
SMARCE1P4-201ENST00000523647 FAM205CA6NFA0 338 aa9.79□□□□□ -0.84
SMARCE1P4-201ENST00000523647 GRXCR2A6NFK2 248 aa9.79□□□□□ -0.84
SMARCE1P4-201ENST00000523647 OSBPP22059 807 aa9.79□□□□□ -0.84
SMARCE1P4-201ENST00000523647 POTEBQ6S5H4 581 aa9.79□□□□□ -0.84
SMARCE1P4-201ENST00000523647 PPP4R3BQ5MIZ7 849 aa9.78□□□□□ -0.84
SMARCE1P4-201ENST00000523647 TYW1BQ6NUM6 668 aa9.78□□□□□ -0.84
SMARCE1P4-201ENST00000523647 HS3ST6Q96QI5 342 aa9.78□□□□□ -0.84
SMARCE1P4-201ENST00000523647 PRIM1P49642 420 aaKnown RBP9.77□□□□□ -0.85
SMARCE1P4-201ENST00000523647 FBXW7Q969H0 707 aa9.77□□□□□ -0.85
SMARCE1P4-201ENST00000523647 ZDHHC16Q969W1 377 aa9.77□□□□□ -0.85
SMARCE1P4-201ENST00000523647 EN1Q05925 392 aaPredicted RBP9.76□□□□□ -0.85
SMARCE1P4-201ENST00000523647 SMYD5Q6GMV2 418 aa9.76□□□□□ -0.85
SMARCE1P4-201ENST00000523647 POTEGQ6S5H5 508 aa9.74□□□□□ -0.85
SMARCE1P4-201ENST00000523647 ADAM33Q9BZ11 813 aa9.74□□□□□ -0.85
SMARCE1P4-201ENST00000523647 BCL2L12Q9HB09 334 aa9.74□□□□□ -0.85
SMARCE1P4-201ENST00000523647 POTEMA6NI47 508 aa9.73□□□□□ -0.85
SMARCE1P4-201ENST00000523647 ZNF687Q8N1G0 1237 aa9.73□□□□□ -0.85
SMARCE1P4-201ENST00000523647 TULP1O00294 542 aaPredicted RBP9.71□□□□□ -0.86
SMARCE1P4-201ENST00000523647 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMARCE1P4-201ENST00000523647 MAP3K7O43318 606 aa9.7□□□□□ -0.86
SMARCE1P4-201ENST00000523647 RBM26Q5T8P6 1007 aaKnown RBP9.7□□□□□ -0.86
SMARCE1P4-201ENST00000523647 POTEEQ6S8J3 1075 aa9.7□□□□□ -0.86
SMARCE1P4-201ENST00000523647 RBM33Q96EV2 1170 aaKnown RBP9.7□□□□□ -0.86
SMARCE1P4-201ENST00000523647 PBX2P40425 430 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms