RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 RASEFQ8IZ41 740 aa9.85□□□□□ -0.83
PABPC1-223ENST00000523636 GRIN2AQ12879 1464 aa9.85□□□□□ -0.83
PABPC1-223ENST00000523636 PCF11O94913 1555 aaKnown RBP9.84□□□□□ -0.83
PABPC1-223ENST00000523636 CHRM1P11229 460 aaPredicted RBP9.83□□□□□ -0.84
PABPC1-223ENST00000523636 FGD5Q6ZNL6 1462 aa9.82□□□□□ -0.84
PABPC1-223ENST00000523636 PRG4Q92954 1404 aaPredicted RBP9.8□□□□□ -0.84
PABPC1-223ENST00000523636 PTPRMP28827 1452 aa9.79□□□□□ -0.84
PABPC1-223ENST00000523636 CCDC88BA6NC98 1476 aa9.79□□□□□ -0.84
PABPC1-223ENST00000523636 KIF21BO75037 1637 aa9.78□□□□□ -0.84
PABPC1-223ENST00000523636 ABCA5Q8WWZ7 1642 aa9.78□□□□□ -0.84
PABPC1-223ENST00000523636 GLI2P10070 1586 aa9.78□□□□□ -0.84
PABPC1-223ENST00000523636 ADAMTSL3P82987 1691 aa9.77□□□□□ -0.84
PABPC1-223ENST00000523636 TAOK2Q9UL54 1235 aa9.77□□□□□ -0.85
PABPC1-223ENST00000523636 ADAMTS12P58397 1594 aa9.75□□□□□ -0.85
PABPC1-223ENST00000523636 PLCB2Q00722 1185 aa9.75□□□□□ -0.85
PABPC1-223ENST00000523636 BBXQ8WY36 941 aaPredicted RBP9.75□□□□□ -0.85
PABPC1-223ENST00000523636 RNF25Q96BH1 459 aaPredicted RBP9.75□□□□□ -0.85
PABPC1-223ENST00000523636 RIOK3O14730 519 aaKnown RBP9.74□□□□□ -0.85
PABPC1-223ENST00000523636 MAP3K4Q9Y6R4 1608 aa9.74□□□□□ -0.85
PABPC1-223ENST00000523636 CUX1P39880 1505 aa9.72□□□□□ -0.85
PABPC1-223ENST00000523636 HSPA2P54652 639 aa9.72□□□□□ -0.85
PABPC1-223ENST00000523636 TSPYL2Q9H2G4 693 aaPredicted RBP9.71□□□□□ -0.86
PABPC1-223ENST00000523636 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.71□□□□□ -0.86
PABPC1-223ENST00000523636 C19orf67A6NJJ6 358 aa9.7□□□□□ -0.86
PABPC1-223ENST00000523636 HAX1O00165 279 aa9.7□□□□□ -0.86
PABPC1-223ENST00000523636 PAK3O75914 559 aaPredicted RBP9.7□□□□□ -0.86
PABPC1-223ENST00000523636 HS6ST3Q8IZP7 471 aa9.7□□□□□ -0.86
PABPC1-223ENST00000523636 SP7Q8TDD2 431 aaPredicted RBP9.7□□□□□ -0.86
PABPC1-223ENST00000523636 VGFO15240 615 aaPredicted RBP9.69□□□□□ -0.86
PABPC1-223ENST00000523636 CHGAP10645 457 aaKnown RBP9.69□□□□□ -0.86
PABPC1-223ENST00000523636 PYGBP11216 843 aa9.69□□□□□ -0.86
PABPC1-223ENST00000523636 JPH4Q96JJ6 628 aa9.69□□□□□ -0.86
PABPC1-223ENST00000523636 SGIP1Q9BQI5 828 aa9.69□□□□□ -0.86
PABPC1-223ENST00000523636 CCDC61Q9Y6R9 512 aa9.68□□□□□ -0.86
PABPC1-223ENST00000523636 ASXL2Q76L83 1435 aa9.67□□□□□ -0.86
PABPC1-223ENST00000523636 MADDQ8WXG6 1647 aa9.67□□□□□ -0.86
PABPC1-223ENST00000523636 EVX2Q03828 476 aa9.66□□□□□ -0.86
PABPC1-223ENST00000523636 RUSC2Q8N2Y8 1516 aa9.66□□□□□ -0.86
PABPC1-223ENST00000523636 ABCA10Q8WWZ4 1543 aa9.66□□□□□ -0.86
PABPC1-223ENST00000523636 ZNF467Q7Z7K2 595 aaPredicted RBP9.65□□□□□ -0.86
PABPC1-223ENST00000523636 MED1Q15648 1581 aaPredicted RBP9.63□□□□□ -0.87
PABPC1-223ENST00000523636 EPRSP07814 1512 aaKnown RBP9.63□□□□□ -0.87
PABPC1-223ENST00000523636 BCORL1Q5H9F3 1711 aa9.63□□□□□ -0.87
PABPC1-223ENST00000523636 CUL7Q14999 1698 aa9.63□□□□□ -0.87
PABPC1-223ENST00000523636 STRCQ7RTU9 1775 aa9.63□□□□□ -0.87
PABPC1-223ENST00000523636 ABCC2Q92887 1545 aa9.62□□□□□ -0.87
PABPC1-223ENST00000523636 PLB1Q6P1J6 1458 aa9.62□□□□□ -0.87
PABPC1-223ENST00000523636 TEX14Q8IWB6 1497 aa9.61□□□□□ -0.87
PABPC1-223ENST00000523636 FHAD1B1AJZ9 1412 aa9.6□□□□□ -0.87
PABPC1-223ENST00000523636 RIMS1Q86UR5 1692 aaKnown RBP9.59□□□□□ -0.87
PABPC1-223ENST00000523636 STK25O00506 426 aa9.59□□□□□ -0.87
PABPC1-223ENST00000523636 CD44P16070 742 aaKnown RBP9.59□□□□□ -0.87
PABPC1-223ENST00000523636 ZNF579Q8NAF0 562 aaKnown RBP9.59□□□□□ -0.87
PABPC1-223ENST00000523636 SPRYD3Q8NCJ5 442 aa9.59□□□□□ -0.87
PABPC1-223ENST00000523636 LTBP4Q8N2S1 1624 aa9.59□□□□□ -0.87
PABPC1-223ENST00000523636 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.58□□□□□ -0.88
PABPC1-223ENST00000523636 PAXIP1Q6ZW49 1069 aaPredicted RBP9.58□□□□□ -0.88
PABPC1-223ENST00000523636 ZFP91Q96JP5 570 aaPredicted RBP9.58□□□□□ -0.88
PABPC1-223ENST00000523636 KIAA0586Q9BVV6 1533 aa9.57□□□□□ -0.88
PABPC1-223ENST00000523636 KIF12Q96FN5 646 aa9.57□□□□□ -0.88
PABPC1-223ENST00000523636 ZRANB1Q9UGI0 708 aa9.57□□□□□ -0.88
PABPC1-223ENST00000523636 PDAP1Q13442 181 aaKnown RBP9.56□□□□□ -0.88
PABPC1-223ENST00000523636 HAP1P54257 671 aaPredicted RBP9.55□□□□□ -0.88
PABPC1-223ENST00000523636 CFAP44Q96MT7 982 aa9.55□□□□□ -0.88
PABPC1-223ENST00000523636 BCL11BQ9C0K0 894 aaPredicted RBP9.55□□□□□ -0.88
PABPC1-223ENST00000523636 PCDHB13Q9Y5F0 798 aa9.55□□□□□ -0.88
PABPC1-223ENST00000523636 STK24Q9Y6E0 443 aa9.54□□□□□ -0.88
PABPC1-223ENST00000523636 MAP3K13O43283 966 aa9.53□□□□□ -0.88
PABPC1-223ENST00000523636 PCDHB8Q9UN66 801 aa9.53□□□□□ -0.88
PABPC1-223ENST00000523636 IQSEC2Q5JU85 1478 aa9.52□□□□□ -0.89
PABPC1-223ENST00000523636 NKX1-1Q15270 411 aaPredicted RBP9.51□□□□□ -0.89
PABPC1-223ENST00000523636 IFNL1Q8IU54 200 aa9.51□□□□□ -0.89
PABPC1-223ENST00000523636 MAGI3Q5TCQ9 1506 aa9.51□□□□□ -0.89
PABPC1-223ENST00000523636 PSEN1P49768 467 aa9.5□□□□□ -0.89
PABPC1-223ENST00000523636 RYDENQ9NUL5 291 aaKnown RBP9.5□□□□□ -0.89
PABPC1-223ENST00000523636 UHRF1BP1LA0JNW5 1464 aa9.49□□□□□ -0.89
PABPC1-223ENST00000523636 VSIG10Q8N0Z9 540 aa9.49□□□□□ -0.89
PABPC1-223ENST00000523636 ERICH3Q5RHP9 1530 aa9.49□□□□□ -0.89
PABPC1-223ENST00000523636 YEATS2Q9ULM3 1422 aa9.48□□□□□ -0.89
PABPC1-223ENST00000523636 SIGLEC1Q9BZZ2 1709 aa9.48□□□□□ -0.89
PABPC1-223ENST00000523636 PHF12Q96QT6 1004 aa9.48□□□□□ -0.89
PABPC1-223ENST00000523636 ZCCHC11Q5TAX3 1644 aaKnown RBP9.48□□□□□ -0.89
PABPC1-223ENST00000523636 PTPRGP23470 1445 aa9.48□□□□□ -0.89
PABPC1-223ENST00000523636 KDM5BQ9UGL1 1544 aa9.47□□□□□ -0.89
PABPC1-223ENST00000523636 GTPBP6O43824 516 aaPredicted RBP9.47□□□□□ -0.89
PABPC1-223ENST00000523636 CLCN6P51797 869 aa9.47□□□□□ -0.89
PABPC1-223ENST00000523636 ARAP3Q8WWN8 1544 aa9.46□□□□□ -0.89
PABPC1-223ENST00000523636 CFAP43Q8NDM7 1665 aa9.46□□□□□ -0.89
PABPC1-223ENST00000523636 GABBR2O75899 941 aa9.46□□□□□ -0.9
PABPC1-223ENST00000523636 PREX1Q8TCU6 1659 aa9.45□□□□□ -0.9
PABPC1-223ENST00000523636 FRMPD1Q5SYB0 1578 aa9.44□□□□□ -0.9
PABPC1-223ENST00000523636 RGS17Q9UGC6 210 aaPredicted RBP9.43□□□□□ -0.9
PABPC1-223ENST00000523636 PTPRTO14522 1441 aa9.42□□□□□ -0.9
PABPC1-223ENST00000523636 CD109Q6YHK3 1445 aa9.42□□□□□ -0.9
PABPC1-223ENST00000523636 TTBK1Q5TCY1 1321 aaPredicted RBP9.41□□□□□ -0.9
PABPC1-223ENST00000523636 HSPA1LP34931 641 aa9.41□□□□□ -0.9
PABPC1-223ENST00000523636 WDR7Q9Y4E6 1490 aa9.4□□□□□ -0.9
PABPC1-223ENST00000523636 MS4A3Q96HJ5 214 aa9.4□□□□□ -0.9
PABPC1-223ENST00000523636 TSHZ2Q9NRE2 1034 aa9.4□□□□□ -0.9
PABPC1-223ENST00000523636 TTC37Q6PGP7 1564 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms