RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 PTPN23Q9H3S7 1636 aa13.98□□□□□ -0.17
SDCBP-212ENST00000523483 CD109Q6YHK3 1445 aa13.97□□□□□ -0.17
SDCBP-212ENST00000523483 MIA2Q96PC5 1412 aa13.97□□□□□ -0.17
SDCBP-212ENST00000523483 TSPY4P0CV99 314 aa13.96□□□□□ -0.17
SDCBP-212ENST00000523483 TSPY10P0CW01 314 aa13.96□□□□□ -0.17
SDCBP-212ENST00000523483 CAMSAP2Q08AD1 1489 aa13.96□□□□□ -0.18
SDCBP-212ENST00000523483 PLCH2O75038 1416 aa13.94□□□□□ -0.18
SDCBP-212ENST00000523483 CCER1Q8TC90 406 aaPredicted RBP13.94□□□□□ -0.18
SDCBP-212ENST00000523483 CDC42BPAQ5VT25 1732 aa13.93□□□□□ -0.18
SDCBP-212ENST00000523483 AFAP1Q8N556 730 aa13.93□□□□□ -0.18
SDCBP-212ENST00000523483 ITSN2Q9NZM3 1697 aa13.93□□□□□ -0.18
SDCBP-212ENST00000523483 FANCAO15360 1455 aa13.92□□□□□ -0.18
SDCBP-212ENST00000523483 PTPRKQ15262 1439 aa13.92□□□□□ -0.18
SDCBP-212ENST00000523483 MAPKBP1O60336 1514 aa13.91□□□□□ -0.18
SDCBP-212ENST00000523483 MYO5CQ9NQX4 1742 aa13.9□□□□□ -0.18
SDCBP-212ENST00000523483 DAPK1P53355 1430 aa13.89□□□□□ -0.19
SDCBP-212ENST00000523483 RAPGEF3O95398 923 aa13.89□□□□□ -0.19
SDCBP-212ENST00000523483 SYCP2Q9BX26 1530 aa13.89□□□□□ -0.19
SDCBP-212ENST00000523483 PREX2Q70Z35 1606 aa13.89□□□□□ -0.19
SDCBP-212ENST00000523483 ABCC5O15440 1437 aa13.88□□□□□ -0.19
SDCBP-212ENST00000523483 CDC42BPBQ9Y5S2 1711 aa13.88□□□□□ -0.19
SDCBP-212ENST00000523483 TRIM52Q96A61 297 aa13.88□□□□□ -0.19
SDCBP-212ENST00000523483 SCAPERQ9BY12 1400 aa13.88□□□□□ -0.19
SDCBP-212ENST00000523483 TCOF1Q13428 1488 aaKnown RBP13.88□□□□□ -0.19
SDCBP-212ENST00000523483 TSPOAP1O95153 1857 aa13.87□□□□□ -0.19
SDCBP-212ENST00000523483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.87□□□□□ -0.19
SDCBP-212ENST00000523483 ADGRL1O94910 1474 aa13.87□□□□□ -0.19
SDCBP-212ENST00000523483 SAMD9LQ8IVG5 1584 aa13.87□□□□□ -0.19
SDCBP-212ENST00000523483 ABCA9Q8IUA7 1624 aa13.87□□□□□ -0.19
SDCBP-212ENST00000523483 RAB3GAP2Q9H2M9 1393 aa13.86□□□□□ -0.19
SDCBP-212ENST00000523483 SPAG9O60271 1321 aaKnown RBP13.85□□□□□ -0.19
SDCBP-212ENST00000523483 AKNAQ7Z591 1439 aa13.85□□□□□ -0.19
SDCBP-212ENST00000523483 TRAPPC8Q9Y2L5 1435 aa13.85□□□□□ -0.19
SDCBP-212ENST00000523483 DIP2BQ9P265 1576 aa13.84□□□□□ -0.19
SDCBP-212ENST00000523483 C9orf84Q5VXU9 1444 aa13.84□□□□□ -0.19
SDCBP-212ENST00000523483 SETD5Q9C0A6 1442 aa13.84□□□□□ -0.19
SDCBP-212ENST00000523483 RSPH4AQ5TD94 716 aa13.83□□□□□ -0.2
SDCBP-212ENST00000523483 CCDC141Q6ZP82 1450 aa13.83□□□□□ -0.2
SDCBP-212ENST00000523483 ARHGEF12Q9NZN5 1544 aa13.83□□□□□ -0.2
SDCBP-212ENST00000523483 ANKRD30AQ9BXX3 1397 aa13.82□□□□□ -0.2
SDCBP-212ENST00000523483 PLEKHH2Q8IVE3 1493 aa13.82□□□□□ -0.2
SDCBP-212ENST00000523483 MBD5Q9P267 1494 aa13.82□□□□□ -0.2
SDCBP-212ENST00000523483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.82□□□□□ -0.2
SDCBP-212ENST00000523483 DNMT1P26358 1616 aaKnown RBP13.8□□□□□ -0.2
SDCBP-212ENST00000523483 KIF15Q9NS87 1388 aa13.8□□□□□ -0.2
SDCBP-212ENST00000523483 KIAA1107Q9UPP5 1409 aa13.79□□□□□ -0.2
SDCBP-212ENST00000523483 NAIPQ13075 1403 aa13.79□□□□□ -0.2
SDCBP-212ENST00000523483 ABCC1P33527 1531 aa13.78□□□□□ -0.2
SDCBP-212ENST00000523483 HFM1A2PYH4 1435 aa13.78□□□□□ -0.2
SDCBP-212ENST00000523483 NCOA1Q15788 1441 aa13.78□□□□□ -0.2
SDCBP-212ENST00000523483 DENND4BO75064 1496 aaPredicted RBP13.76□□□□□ -0.21
SDCBP-212ENST00000523483 ARAP3Q8WWN8 1544 aa13.75□□□□□ -0.21
SDCBP-212ENST00000523483 GLI2P10070 1586 aa13.75□□□□□ -0.21
SDCBP-212ENST00000523483 MAP3K4Q9Y6R4 1608 aa13.75□□□□□ -0.21
SDCBP-212ENST00000523483 TEX14Q8IWB6 1497 aa13.75□□□□□ -0.21
SDCBP-212ENST00000523483 ANKRD50Q9ULJ7 1429 aa13.74□□□□□ -0.21
SDCBP-212ENST00000523483 NEO1Q92859 1461 aa13.74□□□□□ -0.21
SDCBP-212ENST00000523483 ZNF518AQ6AHZ1 1483 aa13.73□□□□□ -0.21
SDCBP-212ENST00000523483 ROCK1Q13464 1354 aa13.73□□□□□ -0.21
SDCBP-212ENST00000523483 FOXD1Q16676 465 aa13.73□□□□□ -0.21
SDCBP-212ENST00000523483 ARHGEF5Q12774 1597 aa13.73□□□□□ -0.21
SDCBP-212ENST00000523483 KIF3BO15066 747 aa13.73□□□□□ -0.21
SDCBP-212ENST00000523483 KIF13AQ9H1H9 1805 aa13.73□□□□□ -0.21
SDCBP-212ENST00000523483 POGZQ7Z3K3 1410 aa13.72□□□□□ -0.21
SDCBP-212ENST00000523483 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
SDCBP-212ENST00000523483 NEUROD1Q13562 356 aa13.71□□□□□ -0.21
SDCBP-212ENST00000523483 GGT6Q6P531 493 aa13.71□□□□□ -0.21
SDCBP-212ENST00000523483 SHANK2Q9UPX8 1470 aa13.7□□□□□ -0.22
SDCBP-212ENST00000523483 MLECQ14165 292 aa13.7□□□□□ -0.22
SDCBP-212ENST00000523483 CFAP74Q9C0B2 1584 aa13.7□□□□□ -0.22
SDCBP-212ENST00000523483 NUP155O75694 1391 aa13.7□□□□□ -0.22
SDCBP-212ENST00000523483 KDM6BO15054 1643 aa13.7□□□□□ -0.22
SDCBP-212ENST00000523483 DHX57Q6P158 1386 aaKnown RBP13.69□□□□□ -0.22
SDCBP-212ENST00000523483 ARID4BQ4LE39 1312 aaPredicted RBP13.68□□□□□ -0.22
SDCBP-212ENST00000523483 CROCC2H7BZ55 1655 aa13.68□□□□□ -0.22
SDCBP-212ENST00000523483 ATP7AQ04656 1500 aa13.68□□□□□ -0.22
SDCBP-212ENST00000523483 ADGRL2O95490 1459 aa13.67□□□□□ -0.22
SDCBP-212ENST00000523483 COL17A1Q9UMD9 1497 aaPredicted RBP13.67□□□□□ -0.22
SDCBP-212ENST00000523483 MPHOSPH9Q99550 1183 aa13.67□□□□□ -0.22
SDCBP-212ENST00000523483 YEATS2Q9ULM3 1422 aa13.67□□□□□ -0.22
SDCBP-212ENST00000523483 ADGBQ8N7X0 1667 aa13.66□□□□□ -0.22
SDCBP-212ENST00000523483 ZFYVE16Q7Z3T8 1539 aa13.66□□□□□ -0.22
SDCBP-212ENST00000523483 SIN3AQ96ST3 1273 aa13.65□□□□□ -0.22
SDCBP-212ENST00000523483 HRCP23327 699 aa13.65□□□□□ -0.22
SDCBP-212ENST00000523483 PPRC1Q5VV67 1664 aaKnown RBP13.65□□□□□ -0.22
SDCBP-212ENST00000523483 PKD2Q13563 968 aa13.64□□□□□ -0.23
SDCBP-212ENST00000523483 RTEL1-TNFRSF6BF6WH68 1400 aa13.64□□□□□ -0.23
SDCBP-212ENST00000523483 PLPPR3Q6T4P5 718 aa13.63□□□□□ -0.23
SDCBP-212ENST00000523483 GCC2Q8IWJ2 1684 aa13.63□□□□□ -0.23
SDCBP-212ENST00000523483 HECW2Q9P2P5 1572 aa13.61□□□□□ -0.23
SDCBP-212ENST00000523483 DHX29Q7Z478 1369 aaKnown RBP13.61□□□□□ -0.23
SDCBP-212ENST00000523483 DUOX2Q9NRD8 1548 aa13.61□□□□□ -0.23
SDCBP-212ENST00000523483 A2MP01023 1474 aa13.61□□□□□ -0.23
SDCBP-212ENST00000523483 MLH3Q9UHC1 1453 aa13.6□□□□□ -0.23
SDCBP-212ENST00000523483 MAST1Q9Y2H9 1570 aa13.6□□□□□ -0.23
SDCBP-212ENST00000523483 KIDINS220Q9ULH0 1771 aa13.6□□□□□ -0.23
SDCBP-212ENST00000523483 KDM5CP41229 1560 aa13.59□□□□□ -0.23
SDCBP-212ENST00000523483 INO80Q9ULG1 1556 aaPredicted RBP13.59□□□□□ -0.23
SDCBP-212ENST00000523483 WASHC2CQ9Y4E1 1318 aa13.59□□□□□ -0.23
SDCBP-212ENST00000523483 RICTORQ6R327 1708 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms