RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 BCORL1Q5H9F3 1711 aa20.07■□□□□ 0.8
VEGFA-223ENST00000523125 EFCAB2Q5VUJ9 269 aa20.06■□□□□ 0.8
VEGFA-223ENST00000523125 SIGLEC1Q9BZZ2 1709 aa20.06■□□□□ 0.8
VEGFA-223ENST00000523125 POGZQ7Z3K3 1410 aa20.05■□□□□ 0.8
VEGFA-223ENST00000523125 PREX2Q70Z35 1606 aa20.05■□□□□ 0.8
VEGFA-223ENST00000523125 CDC42BPAQ5VT25 1732 aa20.05■□□□□ 0.8
VEGFA-223ENST00000523125 ARHGAP5Q13017 1502 aa20.04■□□□□ 0.8
VEGFA-223ENST00000523125 YEATS2Q9ULM3 1422 aa20.03■□□□□ 0.8
VEGFA-223ENST00000523125 ZFYVE16Q7Z3T8 1539 aa20.03■□□□□ 0.8
VEGFA-223ENST00000523125 MAGI2Q86UL8 1455 aa20.03■□□□□ 0.8
VEGFA-223ENST00000523125 CEP162Q5TB80 1403 aa20.01■□□□□ 0.79
VEGFA-223ENST00000523125 MADDQ8WXG6 1647 aa19.99■□□□□ 0.79
VEGFA-223ENST00000523125 KDM5CP41229 1560 aa19.98■□□□□ 0.79
VEGFA-223ENST00000523125 HECW2Q9P2P5 1572 aa19.98■□□□□ 0.79
VEGFA-223ENST00000523125 ARID4BQ4LE39 1312 aaPredicted RBP19.98■□□□□ 0.79
VEGFA-223ENST00000523125 PTPRMP28827 1452 aa19.97■□□□□ 0.79
VEGFA-223ENST00000523125 ZNF518AQ6AHZ1 1483 aa19.96■□□□□ 0.79
VEGFA-223ENST00000523125 ITSN2Q9NZM3 1697 aa19.95■□□□□ 0.78
VEGFA-223ENST00000523125 ABCC1P33527 1531 aa19.95■□□□□ 0.78
VEGFA-223ENST00000523125 ARHGEF12Q9NZN5 1544 aa19.95■□□□□ 0.78
VEGFA-223ENST00000523125 AFAP1Q8N556 730 aa19.94■□□□□ 0.78
VEGFA-223ENST00000523125 RIMS1Q86UR5 1692 aaKnown RBP19.94■□□□□ 0.78
VEGFA-223ENST00000523125 LOC105371045A0A1W2PR82 267 aa19.93■□□□□ 0.78
VEGFA-223ENST00000523125 ATP10AO60312 1499 aa19.92■□□□□ 0.78
VEGFA-223ENST00000523125 GPATCH8Q9UKJ3 1502 aaKnown RBP19.92■□□□□ 0.78
VEGFA-223ENST00000523125 TRAPPC8Q9Y2L5 1435 aa19.9■□□□□ 0.78
VEGFA-223ENST00000523125 SAMD9LQ8IVG5 1584 aa19.9■□□□□ 0.78
VEGFA-223ENST00000523125 C9orf84Q5VXU9 1444 aa19.89■□□□□ 0.77
VEGFA-223ENST00000523125 FER1L4A9Z1Z3 1794 aa19.88■□□□□ 0.77
VEGFA-223ENST00000523125 ABCA6Q8N139 1617 aa19.88■□□□□ 0.77
VEGFA-223ENST00000523125 DIP2CQ9Y2E4 1556 aa19.88■□□□□ 0.77
VEGFA-223ENST00000523125 MLH3Q9UHC1 1453 aa19.87■□□□□ 0.77
VEGFA-223ENST00000523125 MTUS2Q5JR59 1369 aa19.87■□□□□ 0.77
VEGFA-223ENST00000523125 KIDINS220Q9ULH0 1771 aa19.87■□□□□ 0.77
VEGFA-223ENST00000523125 EHBP1L1Q8N3D4 1523 aa19.85■□□□□ 0.77
VEGFA-223ENST00000523125 REREQ9P2R6 1566 aa19.84■□□□□ 0.77
VEGFA-223ENST00000523125 TIAM1Q13009 1591 aa19.83■□□□□ 0.77
VEGFA-223ENST00000523125 SYCP2Q9BX26 1530 aa19.83■□□□□ 0.77
VEGFA-223ENST00000523125 CCNB3Q8WWL7 1395 aa19.83■□□□□ 0.76
VEGFA-223ENST00000523125 MLECQ14165 292 aa19.82■□□□□ 0.76
VEGFA-223ENST00000523125 ZNF777Q9ULD5 760 aaPredicted RBP19.82■□□□□ 0.76
VEGFA-223ENST00000523125 CFDP1Q9UEE9 299 aaPredicted RBP19.8■□□□□ 0.76
VEGFA-223ENST00000523125 KIAA1107Q9UPP5 1409 aa19.79■□□□□ 0.76
VEGFA-223ENST00000523125 HNRNPMP52272 730 aaKnown RBP eCLIP19.79■□□□□ 0.761e-12■■■■■ 34.3
VEGFA-223ENST00000523125 MYT1LQ9UL68 1186 aa19.79■□□□□ 0.76
VEGFA-223ENST00000523125 VPS8Q8N3P4 1428 aa19.78■□□□□ 0.76
VEGFA-223ENST00000523125 SUPT6HQ7KZ85 1726 aaKnown RBP19.77■□□□□ 0.76
VEGFA-223ENST00000523125 PLEKHH2Q8IVE3 1493 aa19.77■□□□□ 0.76
VEGFA-223ENST00000523125 AGLP35573 1532 aa19.76■□□□□ 0.75
VEGFA-223ENST00000523125 LMTK3Q96Q04 1460 aa19.76■□□□□ 0.75
VEGFA-223ENST00000523125 ZNF644Q9H582 1327 aaPredicted RBP19.75■□□□□ 0.75
VEGFA-223ENST00000523125 INO80Q9ULG1 1556 aaPredicted RBP19.74■□□□□ 0.75
VEGFA-223ENST00000523125 NCOA2Q15596 1464 aa19.73■□□□□ 0.75
VEGFA-223ENST00000523125 ATP7AQ04656 1500 aa19.73■□□□□ 0.75
VEGFA-223ENST00000523125 SPAG9O60271 1321 aaKnown RBP19.72■□□□□ 0.75
VEGFA-223ENST00000523125 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
VEGFA-223ENST00000523125 MBD5Q9P267 1494 aa19.71■□□□□ 0.75
VEGFA-223ENST00000523125 C3P01024 1663 aa19.69■□□□□ 0.74
VEGFA-223ENST00000523125 LRRC9Q6ZRR7 1453 aa19.69■□□□□ 0.74
VEGFA-223ENST00000523125 MAP3K1Q13233 1512 aa19.69■□□□□ 0.74
VEGFA-223ENST00000523125 PLXNC1O60486 1568 aa19.67■□□□□ 0.74
VEGFA-223ENST00000523125 SETD1BQ9UPS6 1966 aaKnown RBP19.67■□□□□ 0.74
VEGFA-223ENST00000523125 CEBPAP49715 358 aaPredicted RBP19.67■□□□□ 0.74
VEGFA-223ENST00000523125 PREX1Q8TCU6 1659 aa19.67■□□□□ 0.74
VEGFA-223ENST00000523125 ADGBQ8N7X0 1667 aa19.66■□□□□ 0.74
VEGFA-223ENST00000523125 KANK4Q5T7N3 995 aaPredicted RBP19.64■□□□□ 0.73
VEGFA-223ENST00000523125 CAMSAP2Q08AD1 1489 aa19.64■□□□□ 0.73
VEGFA-223ENST00000523125 A2MP01023 1474 aa19.63■□□□□ 0.73
VEGFA-223ENST00000523125 HSPA2P54652 639 aa19.63■□□□□ 0.73
VEGFA-223ENST00000523125 MROH2AA6NES4 1674 aa19.61■□□□□ 0.73
VEGFA-223ENST00000523125 RTEL1-TNFRSF6BF6WH68 1400 aa19.6■□□□□ 0.73
VEGFA-223ENST00000523125 ARHGEF5Q12774 1597 aa19.59■□□□□ 0.73
VEGFA-223ENST00000523125 CCDC141Q6ZP82 1450 aa19.59■□□□□ 0.73
VEGFA-223ENST00000523125 CLTCQ00610 1675 aaKnown RBP19.58■□□□□ 0.72
VEGFA-223ENST00000523125 CNTLNQ9NXG0 1405 aa19.58■□□□□ 0.72
VEGFA-223ENST00000523125 ESF1Q9H501 851 aaKnown RBP19.56■□□□□ 0.72
VEGFA-223ENST00000523125 RSPH4AQ5TD94 716 aa19.55■□□□□ 0.72
VEGFA-223ENST00000523125 ILDR1Q86SU0 546 aaPredicted RBP19.54■□□□□ 0.72
VEGFA-223ENST00000523125 STRCQ7RTU9 1775 aa19.54■□□□□ 0.72
VEGFA-223ENST00000523125 MYOM3Q5VTT5 1437 aa19.53■□□□□ 0.72
VEGFA-223ENST00000523125 DHX29Q7Z478 1369 aaKnown RBP19.53■□□□□ 0.72
VEGFA-223ENST00000523125 UHRF1BP1Q6BDS2 1440 aa19.52■□□□□ 0.72
VEGFA-223ENST00000523125 ZMYM3Q14202 1370 aa19.52■□□□□ 0.72
VEGFA-223ENST00000523125 MIA2Q96PC5 1412 aa19.51■□□□□ 0.71
VEGFA-223ENST00000523125 MAST1Q9Y2H9 1570 aa19.5■□□□□ 0.71
VEGFA-223ENST00000523125 GGT6Q6P531 493 aa19.5■□□□□ 0.71
VEGFA-223ENST00000523125 NPATQ14207 1427 aa19.49■□□□□ 0.71
VEGFA-223ENST00000523125 PPP6R1Q9UPN7 881 aa19.47■□□□□ 0.71
VEGFA-223ENST00000523125 TSPY4P0CV99 314 aa19.46■□□□□ 0.71
VEGFA-223ENST00000523125 TSPY10P0CW01 314 aa19.46■□□□□ 0.71
VEGFA-223ENST00000523125 APLP2Q06481 763 aa19.45■□□□□ 0.7
VEGFA-223ENST00000523125 PTPN23Q9H3S7 1636 aa19.44■□□□□ 0.7
VEGFA-223ENST00000523125 PTPRKQ15262 1439 aa19.44■□□□□ 0.7
VEGFA-223ENST00000523125 KIF3BO15066 747 aa19.44■□□□□ 0.7
VEGFA-223ENST00000523125 CROCC2H7BZ55 1655 aa19.43■□□□□ 0.7
VEGFA-223ENST00000523125 MYO3AQ8NEV4 1616 aa19.43■□□□□ 0.7
VEGFA-223ENST00000523125 ZNF142P52746 1687 aaPredicted RBP19.42■□□□□ 0.7
VEGFA-223ENST00000523125 FAM135AQ9P2D6 1515 aa19.41■□□□□ 0.7
VEGFA-223ENST00000523125 RNF17Q9BXT8 1623 aaKnown RBP19.4■□□□□ 0.7
VEGFA-223ENST00000523125 KDM5DQ9BY66 1539 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms