RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 MAGI2Q86UL8 1455 aa34.11■■■■□ 3.05
PABPC1-218ENST00000521865 CLIP1P30622 1438 aa34.1■■■■□ 3.05
PABPC1-218ENST00000521865 PLPPR3Q6T4P5 718 aa34.09■■■■□ 3.05
PABPC1-218ENST00000521865 TROQ12816 1431 aaPredicted RBP34.09■■■■□ 3.05
PABPC1-218ENST00000521865 MLECQ14165 292 aa34.07■■■■□ 3.04
PABPC1-218ENST00000521865 KIF14Q15058 1648 aa34.07■■■■□ 3.04
PABPC1-218ENST00000521865 MYO5CQ9NQX4 1742 aa34.02■■■■□ 3.04
PABPC1-218ENST00000521865 RIMS1Q86UR5 1692 aaKnown RBP34.02■■■■□ 3.04
PABPC1-218ENST00000521865 ARHGAP5Q13017 1502 aa34■■■■□ 3.03
PABPC1-218ENST00000521865 MYT1LQ9UL68 1186 aa33.98■■■■□ 3.03
PABPC1-218ENST00000521865 PCF11O94913 1555 aaKnown RBP33.97■■■■□ 3.03
PABPC1-218ENST00000521865 CASKIN1Q8WXD9 1431 aa33.96■■■■□ 3.03
PABPC1-218ENST00000521865 ATP10AO60312 1499 aa33.95■■■■□ 3.02
PABPC1-218ENST00000521865 CCDC18Q5T9S5 1454 aa33.93■■■■□ 3.02
PABPC1-218ENST00000521865 ZNF518AQ6AHZ1 1483 aa33.93■■■■□ 3.02
PABPC1-218ENST00000521865 LMTK3Q96Q04 1460 aa33.93■■■■□ 3.02
PABPC1-218ENST00000521865 AFAP1Q8N556 730 aa33.92■■■■□ 3.02
PABPC1-218ENST00000521865 C9orf84Q5VXU9 1444 aa33.92■■■■□ 3.02
PABPC1-218ENST00000521865 SIGLEC1Q9BZZ2 1709 aa33.92■■■■□ 3.02
PABPC1-218ENST00000521865 LRRIQ1Q96JM4 1722 aa33.9■■■■□ 3.02
PABPC1-218ENST00000521865 HSPA2P54652 639 aa33.85■■■■□ 3.01
PABPC1-218ENST00000521865 FYCO1Q9BQS8 1478 aa33.81■■■■□ 3
PABPC1-218ENST00000521865 KDM5CP41229 1560 aa33.8■■■■□ 3
PABPC1-218ENST00000521865 FER1L4A9Z1Z3 1794 aa33.8■■■■□ 3
PABPC1-218ENST00000521865 ARHGEF12Q9NZN5 1544 aa33.78■■■■□ 3
PABPC1-218ENST00000521865 CDC42BPBQ9Y5S2 1711 aa33.76■■■□□ 2.99
PABPC1-218ENST00000521865 PREX2Q70Z35 1606 aa33.75■■■□□ 2.99
PABPC1-218ENST00000521865 FBXO41Q8TF61 875 aa33.74■■■□□ 2.99
PABPC1-218ENST00000521865 ZNF777Q9ULD5 760 aaPredicted RBP33.74■■■□□ 2.99
PABPC1-218ENST00000521865 TRAPPC8Q9Y2L5 1435 aa33.73■■■□□ 2.99
PABPC1-218ENST00000521865 CEBPAP49715 358 aaPredicted RBP33.73■■■□□ 2.99
PABPC1-218ENST00000521865 ABCC1P33527 1531 aa33.72■■■□□ 2.99
PABPC1-218ENST00000521865 MLH3Q9UHC1 1453 aa33.71■■■□□ 2.99
PABPC1-218ENST00000521865 DIP2CQ9Y2E4 1556 aa33.7■■■□□ 2.99
PABPC1-218ENST00000521865 ESF1Q9H501 851 aaKnown RBP33.66■■■□□ 2.98
PABPC1-218ENST00000521865 ABCA6Q8N139 1617 aa33.64■■■□□ 2.98
PABPC1-218ENST00000521865 ITSN2Q9NZM3 1697 aa33.62■■■□□ 2.97
PABPC1-218ENST00000521865 REREQ9P2R6 1566 aa33.62■■■□□ 2.97
PABPC1-218ENST00000521865 CDC42BPAQ5VT25 1732 aa33.61■■■□□ 2.97
PABPC1-218ENST00000521865 GPATCH8Q9UKJ3 1502 aaKnown RBP33.58■■■□□ 2.97
PABPC1-218ENST00000521865 CFDP1Q9UEE9 299 aaPredicted RBP33.58■■■□□ 2.97
PABPC1-218ENST00000521865 MTUS2Q5JR59 1369 aa33.58■■■□□ 2.97
PABPC1-218ENST00000521865 HNRNPMP52272 730 aaKnown RBP eCLIP33.56■■■□□ 2.96
PABPC1-218ENST00000521865 CCNB3Q8WWL7 1395 aa33.56■■■□□ 2.96
PABPC1-218ENST00000521865 SPAG9O60271 1321 aaKnown RBP33.54■■■□□ 2.96
PABPC1-218ENST00000521865 AGLP35573 1532 aa33.54■■■□□ 2.96
PABPC1-218ENST00000521865 SYCP2Q9BX26 1530 aa33.53■■■□□ 2.96
PABPC1-218ENST00000521865 PREX1Q8TCU6 1659 aa33.53■■■□□ 2.96
PABPC1-218ENST00000521865 SAMD9LQ8IVG5 1584 aa33.53■■■□□ 2.96
PABPC1-218ENST00000521865 UHRF1BP1Q6BDS2 1440 aa33.53■■■□□ 2.96
PABPC1-218ENST00000521865 KIDINS220Q9ULH0 1771 aa33.5■■■□□ 2.95
PABPC1-218ENST00000521865 PLEKHH2Q8IVE3 1493 aa33.46■■■□□ 2.95
PABPC1-218ENST00000521865 KIAA1107Q9UPP5 1409 aa33.45■■■□□ 2.94
PABPC1-218ENST00000521865 CERKQ8TCT0 537 aa33.43■■■□□ 2.94
PABPC1-218ENST00000521865 CNTLNQ9NXG0 1405 aa33.43■■■□□ 2.94
PABPC1-218ENST00000521865 DMRT2Q9Y5R5 561 aa33.42■■■□□ 2.94
PABPC1-218ENST00000521865 CEP162Q5TB80 1403 aa33.42■■■□□ 2.94
PABPC1-218ENST00000521865 C3P01024 1663 aa33.39■■■□□ 2.94
PABPC1-218ENST00000521865 ATP7AQ04656 1500 aa33.38■■■□□ 2.93
PABPC1-218ENST00000521865 EHBP1L1Q8N3D4 1523 aa33.36■■■□□ 2.93
PABPC1-218ENST00000521865 ZNF644Q9H582 1327 aaPredicted RBP33.35■■■□□ 2.93
PABPC1-218ENST00000521865 SETD1BQ9UPS6 1966 aaKnown RBP33.32■■■□□ 2.93
PABPC1-218ENST00000521865 A2MP01023 1474 aa33.32■■■□□ 2.92
PABPC1-218ENST00000521865 TIAM1Q13009 1591 aa33.3■■■□□ 2.92
PABPC1-218ENST00000521865 INO80Q9ULG1 1556 aaPredicted RBP33.3■■■□□ 2.92
PABPC1-218ENST00000521865 GGT6Q6P531 493 aa33.3■■■□□ 2.92
PABPC1-218ENST00000521865 ZMYM3Q14202 1370 aa33.3■■■□□ 2.92
PABPC1-218ENST00000521865 SUPT6HQ7KZ85 1726 aaKnown RBP33.3■■■□□ 2.92
PABPC1-218ENST00000521865 STRCQ7RTU9 1775 aa33.25■■■□□ 2.91
PABPC1-218ENST00000521865 PLXNC1O60486 1568 aa33.23■■■□□ 2.91
PABPC1-218ENST00000521865 NPATQ14207 1427 aa33.23■■■□□ 2.91
PABPC1-218ENST00000521865 MBD5Q9P267 1494 aa33.22■■■□□ 2.91
PABPC1-218ENST00000521865 MROH2AA6NES4 1674 aa33.2■■■□□ 2.91
PABPC1-218ENST00000521865 PTPRTO14522 1441 aa33.19■■■□□ 2.9
PABPC1-218ENST00000521865 NCOA2Q15596 1464 aa33.18■■■□□ 2.9
PABPC1-218ENST00000521865 RTEL1-TNFRSF6BF6WH68 1400 aa33.16■■■□□ 2.9
PABPC1-218ENST00000521865 CLTCQ00610 1675 aaKnown RBP33.16■■■□□ 2.9
PABPC1-218ENST00000521865 NCOA1Q15788 1441 aa33.15■■■□□ 2.9
PABPC1-218ENST00000521865 PPP6R1Q9UPN7 881 aa33.15■■■□□ 2.9
PABPC1-218ENST00000521865 LOC105371045A0A1W2PR82 267 aa33.14■■■□□ 2.9
PABPC1-218ENST00000521865 ADGBQ8N7X0 1667 aa33.13■■■□□ 2.89
PABPC1-218ENST00000521865 CCDC141Q6ZP82 1450 aa33.12■■■□□ 2.89
PABPC1-218ENST00000521865 DHX29Q7Z478 1369 aaKnown RBP33.11■■■□□ 2.89
PABPC1-218ENST00000521865 CAMSAP2Q08AD1 1489 aa33.11■■■□□ 2.89
PABPC1-218ENST00000521865 RSPH4AQ5TD94 716 aa33.1■■■□□ 2.89
PABPC1-218ENST00000521865 PTPRKQ15262 1439 aa33.1■■■□□ 2.89
PABPC1-218ENST00000521865 CAMSAP1Q5T5Y3 1602 aa33.1■■■□□ 2.89
PABPC1-218ENST00000521865 KIF3BO15066 747 aa33.07■■■□□ 2.88
PABPC1-218ENST00000521865 VPS8Q8N3P4 1428 aa33.07■■■□□ 2.88
PABPC1-218ENST00000521865 NCKAP5LQ9HCH0 1330 aa33.06■■■□□ 2.88
PABPC1-218ENST00000521865 TSPY4P0CV99 314 aa33.03■■■□□ 2.88
PABPC1-218ENST00000521865 TSPY10P0CW01 314 aa33.03■■■□□ 2.88
PABPC1-218ENST00000521865 MYO3AQ8NEV4 1616 aa33.01■■■□□ 2.87
PABPC1-218ENST00000521865 LRRC9Q6ZRR7 1453 aa33■■■□□ 2.87
PABPC1-218ENST00000521865 CEP170BQ9Y4F5 1589 aaPredicted RBP32.98■■■□□ 2.87
PABPC1-218ENST00000521865 PKD2Q13563 968 aa32.97■■■□□ 2.87
PABPC1-218ENST00000521865 WASHC2CQ9Y4E1 1318 aa32.96■■■□□ 2.87
PABPC1-218ENST00000521865 LTBP4Q8N2S1 1624 aa32.95■■■□□ 2.86
PABPC1-218ENST00000521865 PLA2R1Q13018 1463 aa32.94■■■□□ 2.86
PABPC1-218ENST00000521865 ZNF142P52746 1687 aaPredicted RBP32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms