RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 ABCA8O94911 1581 aa20.03■□□□□ 0.8
SMIM12-206ENST00000521580 GCC2Q8IWJ2 1684 aa20.03■□□□□ 0.8
SMIM12-206ENST00000521580 GPATCH8Q9UKJ3 1502 aaKnown RBP20.03■□□□□ 0.8
SMIM12-206ENST00000521580 KIF14Q15058 1648 aa20.03■□□□□ 0.8
SMIM12-206ENST00000521580 MPHOSPH9Q99550 1183 aa20.03■□□□□ 0.8
SMIM12-206ENST00000521580 KDM6BO15054 1643 aa20.03■□□□□ 0.8
SMIM12-206ENST00000521580 ROCK1Q13464 1354 aa20.02■□□□□ 0.8
SMIM12-206ENST00000521580 HIRIP3Q9BW71 556 aaPredicted RBP20.01■□□□□ 0.79
SMIM12-206ENST00000521580 CAMSAP2Q08AD1 1489 aa20.01■□□□□ 0.79
SMIM12-206ENST00000521580 DNMT1P26358 1616 aaKnown RBP20■□□□□ 0.79
SMIM12-206ENST00000521580 CHD1O14646 1710 aa20■□□□□ 0.79
SMIM12-206ENST00000521580 FOXD1Q16676 465 aa19.99■□□□□ 0.79
SMIM12-206ENST00000521580 ITSN2Q9NZM3 1697 aa19.96■□□□□ 0.79
SMIM12-206ENST00000521580 ADCY10Q96PN6 1610 aa19.95■□□□□ 0.78
SMIM12-206ENST00000521580 DDX10Q13206 875 aaKnown RBP19.95■□□□□ 0.78
SMIM12-206ENST00000521580 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
SMIM12-206ENST00000521580 DENND4BO75064 1496 aaPredicted RBP19.94■□□□□ 0.78
SMIM12-206ENST00000521580 GTF3C3Q9Y5Q9 886 aa19.9■□□□□ 0.78
SMIM12-206ENST00000521580 NCOA1Q15788 1441 aa19.9■□□□□ 0.78
SMIM12-206ENST00000521580 ABCC10Q5T3U5 1492 aa19.9■□□□□ 0.78
SMIM12-206ENST00000521580 ANKRD30AQ9BXX3 1397 aa19.89■□□□□ 0.77
SMIM12-206ENST00000521580 TSPY4P0CV99 314 aa19.88■□□□□ 0.77
SMIM12-206ENST00000521580 TSPY10P0CW01 314 aa19.88■□□□□ 0.77
SMIM12-206ENST00000521580 HNRNPMP52272 730 aaKnown RBP eCLIP19.86■□□□□ 0.77
SMIM12-206ENST00000521580 ERCC6L2Q5T890 1561 aa19.85■□□□□ 0.77
SMIM12-206ENST00000521580 L3MBTL2Q969R5 705 aa19.84■□□□□ 0.77
SMIM12-206ENST00000521580 CDC42BPAQ5VT25 1732 aa19.84■□□□□ 0.77
SMIM12-206ENST00000521580 SHROOM2Q13796 1616 aa19.84■□□□□ 0.77
SMIM12-206ENST00000521580 ANKRD30BQ9BXX2 1392 aa19.83■□□□□ 0.76
SMIM12-206ENST00000521580 KCNH8Q96L42 1107 aa19.82■□□□□ 0.76
SMIM12-206ENST00000521580 ADGRL2O95490 1459 aa19.82■□□□□ 0.76
SMIM12-206ENST00000521580 C9orf84Q5VXU9 1444 aa19.81■□□□□ 0.76
SMIM12-206ENST00000521580 KDM5BQ9UGL1 1544 aa19.81■□□□□ 0.76
SMIM12-206ENST00000521580 ANKRD50Q9ULJ7 1429 aa19.81■□□□□ 0.76
SMIM12-206ENST00000521580 ADGBQ8N7X0 1667 aa19.79■□□□□ 0.76
SMIM12-206ENST00000521580 PKD2Q13563 968 aa19.77■□□□□ 0.76
SMIM12-206ENST00000521580 PZPP20742 1482 aa19.77■□□□□ 0.76
SMIM12-206ENST00000521580 CROCC2H7BZ55 1655 aa19.77■□□□□ 0.76
SMIM12-206ENST00000521580 ABCC2Q92887 1545 aa19.76■□□□□ 0.75
SMIM12-206ENST00000521580 RPRD2Q5VT52 1461 aaKnown RBP19.75■□□□□ 0.75
SMIM12-206ENST00000521580 SHANK2Q9UPX8 1470 aa19.75■□□□□ 0.75
SMIM12-206ENST00000521580 HSPA5P11021 654 aaKnown RBP19.74■□□□□ 0.75
SMIM12-206ENST00000521580 NUP155O75694 1391 aa19.74■□□□□ 0.75
SMIM12-206ENST00000521580 KIF15Q9NS87 1388 aa19.74■□□□□ 0.75
SMIM12-206ENST00000521580 EIF4G2P78344 907 aaKnown RBP eCLIP19.73■□□□□ 0.75
SMIM12-206ENST00000521580 CLASP1Q7Z460 1538 aa19.72■□□□□ 0.75
SMIM12-206ENST00000521580 MBD5Q9P267 1494 aa19.72■□□□□ 0.75
SMIM12-206ENST00000521580 ANP32CO43423 234 aa19.71■□□□□ 0.75
SMIM12-206ENST00000521580 ARHGAP5Q13017 1502 aa19.71■□□□□ 0.75
SMIM12-206ENST00000521580 RSPH4AQ5TD94 716 aa19.71■□□□□ 0.75
SMIM12-206ENST00000521580 KIAA1107Q9UPP5 1409 aa19.71■□□□□ 0.75
SMIM12-206ENST00000521580 CCDC141Q6ZP82 1450 aa19.7■□□□□ 0.74
SMIM12-206ENST00000521580 SAMD9LQ8IVG5 1584 aa19.69■□□□□ 0.74
SMIM12-206ENST00000521580 NBPF8Q3BBV2 869 aa19.69■□□□□ 0.74
SMIM12-206ENST00000521580 PREX2Q70Z35 1606 aa19.69■□□□□ 0.74
SMIM12-206ENST00000521580 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.68■□□□□ 0.74
SMIM12-206ENST00000521580 TTC37Q6PGP7 1564 aa19.68■□□□□ 0.74
SMIM12-206ENST00000521580 CDC42BPBQ9Y5S2 1711 aa19.68■□□□□ 0.74
SMIM12-206ENST00000521580 ARHGEF5Q12774 1597 aa19.68■□□□□ 0.74
SMIM12-206ENST00000521580 TEX14Q8IWB6 1497 aa19.66■□□□□ 0.74
SMIM12-206ENST00000521580 ZNF326Q5BKZ1 582 aaKnown RBP19.66■□□□□ 0.74
SMIM12-206ENST00000521580 SYCP2Q9BX26 1530 aa19.65■□□□□ 0.74
SMIM12-206ENST00000521580 WASHC2AQ641Q2 1341 aa19.62■□□□□ 0.73
SMIM12-206ENST00000521580 EFCAB2Q5VUJ9 269 aa19.62■□□□□ 0.73
SMIM12-206ENST00000521580 UHRF1BP1LA0JNW5 1464 aa19.61■□□□□ 0.73
SMIM12-206ENST00000521580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.61■□□□□ 0.73
SMIM12-206ENST00000521580 ZCCHC11Q5TAX3 1644 aaKnown RBP19.6■□□□□ 0.73
SMIM12-206ENST00000521580 PLEKHH2Q8IVE3 1493 aa19.58■□□□□ 0.73
SMIM12-206ENST00000521580 PLCH2O75038 1416 aa19.58■□□□□ 0.72
SMIM12-206ENST00000521580 MYO5CQ9NQX4 1742 aa19.57■□□□□ 0.72
SMIM12-206ENST00000521580 CCER2I3L3R5 266 aa19.57■□□□□ 0.72
SMIM12-206ENST00000521580 C11orf95C9JLR9 678 aaPredicted RBP19.54■□□□□ 0.72
SMIM12-206ENST00000521580 KDM2AQ9Y2K7 1162 aa19.54■□□□□ 0.72
SMIM12-206ENST00000521580 KDM5DQ9BY66 1539 aa19.53■□□□□ 0.72
SMIM12-206ENST00000521580 ARHGEF12Q9NZN5 1544 aa19.53■□□□□ 0.72
SMIM12-206ENST00000521580 CCDC7Q96M83 1385 aa19.5■□□□□ 0.71
SMIM12-206ENST00000521580 FAM135AQ9P2D6 1515 aa19.5■□□□□ 0.71
SMIM12-206ENST00000521580 OSCARQ8IYS5 282 aa19.49■□□□□ 0.71
SMIM12-206ENST00000521580 MAST1Q9Y2H9 1570 aa19.49■□□□□ 0.71
SMIM12-206ENST00000521580 DCAF11Q8TEB1 546 aa19.49■□□□□ 0.71
SMIM12-206ENST00000521580 TRAPPC8Q9Y2L5 1435 aa19.48■□□□□ 0.71
SMIM12-206ENST00000521580 AFAP1Q8N556 730 aa19.48■□□□□ 0.71
SMIM12-206ENST00000521580 POLR3GLQ9BT43 218 aa19.47■□□□□ 0.71
SMIM12-206ENST00000521580 SPAG9O60271 1321 aaKnown RBP19.47■□□□□ 0.71
SMIM12-206ENST00000521580 SPATA31E1Q6ZUB1 1445 aa19.46■□□□□ 0.71
SMIM12-206ENST00000521580 WDR7Q9Y4E6 1490 aa19.46■□□□□ 0.71
SMIM12-206ENST00000521580 MYT1LQ9UL68 1186 aa19.46■□□□□ 0.71
SMIM12-206ENST00000521580 USP47Q96K76 1375 aa19.45■□□□□ 0.7
SMIM12-206ENST00000521580 KIF7Q2M1P5 1343 aa19.45■□□□□ 0.7
SMIM12-206ENST00000521580 CNTLNQ9NXG0 1405 aa19.45■□□□□ 0.7
SMIM12-206ENST00000521580 RGL3Q3MIN7 710 aa19.45■□□□□ 0.7
SMIM12-206ENST00000521580 CARD11Q9BXL7 1154 aa19.44■□□□□ 0.7
SMIM12-206ENST00000521580 CCDC144AA2RUR9 1427 aa19.44■□□□□ 0.7
SMIM12-206ENST00000521580 ABCC1P33527 1531 aa19.44■□□□□ 0.7
SMIM12-206ENST00000521580 DUOX2Q9NRD8 1548 aa19.44■□□□□ 0.7
SMIM12-206ENST00000521580 PLXNC1O60486 1568 aa19.43■□□□□ 0.7
SMIM12-206ENST00000521580 NPM1P06748 294 aaKnown RBP eCLIP19.43■□□□□ 0.7
SMIM12-206ENST00000521580 ERBINQ96RT1 1412 aa19.4■□□□□ 0.7
SMIM12-206ENST00000521580 UHRF1BP1Q6BDS2 1440 aa19.4■□□□□ 0.7
SMIM12-206ENST00000521580 UNC13BO14795 1591 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms