RNA–Protein interactions for RNA: ENST00000521179.5

TVP23C-206, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-206ENST00000521179 NCKAP5LQ9HCH0 1330 aa13.46□□□□□ -0.25
TVP23C-206ENST00000521179 MAMSTRQ6ZN01 415 aa13.46□□□□□ -0.25
TVP23C-206ENST00000521179 PDE4AP27815 886 aa13.45□□□□□ -0.26
TVP23C-206ENST00000521179 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.45□□□□□ -0.26
TVP23C-206ENST00000521179 KDM2AQ9Y2K7 1162 aa13.45□□□□□ -0.26
TVP23C-206ENST00000521179 LHX8Q68G74 356 aa13.44□□□□□ -0.26
TVP23C-206ENST00000521179 TMEM92Q6UXU6 159 aa13.43□□□□□ -0.26
TVP23C-206ENST00000521179 GPHNQ9NQX3 736 aaPredicted RBP13.43□□□□□ -0.26
TVP23C-206ENST00000521179 KIF3CO14782 793 aa13.42□□□□□ -0.26
TVP23C-206ENST00000521179 SCUBE2Q9NQ36 999 aa13.41□□□□□ -0.26
TVP23C-206ENST00000521179 TMC2Q8TDI7 906 aa13.4□□□□□ -0.26
TVP23C-206ENST00000521179 MFSD10Q14728 455 aa13.39□□□□□ -0.27
TVP23C-206ENST00000521179 LARP6Q9BRS8 491 aaKnown RBP13.39□□□□□ -0.27
TVP23C-206ENST00000521179 C2orf72A6NCS6 295 aa13.38□□□□□ -0.27
TVP23C-206ENST00000521179 OTUD5Q96G74 571 aa13.36□□□□□ -0.27
TVP23C-206ENST00000521179 FOXK1P85037 733 aa13.35□□□□□ -0.27
TVP23C-206ENST00000521179 DDX27Q96GQ7 796 aaKnown RBP13.34□□□□□ -0.27
TVP23C-206ENST00000521179 WDR70Q9NW82 654 aa13.34□□□□□ -0.27
TVP23C-206ENST00000521179 DSG2Q14126 1118 aa13.32□□□□□ -0.28
TVP23C-206ENST00000521179 SLAIN1Q8ND83 568 aa13.32□□□□□ -0.28
TVP23C-206ENST00000521179 PPP1R15BQ5SWA1 713 aa13.3□□□□□ -0.28
TVP23C-206ENST00000521179 PLPP6Q8IY26 295 aa13.28□□□□□ -0.28
TVP23C-206ENST00000521179 CAMK2BQ13554 666 aa13.24□□□□□ -0.29
TVP23C-206ENST00000521179 E2F4Q16254 413 aa13.23□□□□□ -0.29
TVP23C-206ENST00000521179 SLC34A2O95436 690 aa13.17□□□□□ -0.3
TVP23C-206ENST00000521179 P3H3Q8IVL6 736 aa13.17□□□□□ -0.3
TVP23C-206ENST00000521179 KCNV2Q8TDN2 545 aa13.16□□□□□ -0.3
TVP23C-206ENST00000521179 HOXB3P14651 431 aaPredicted RBP13.15□□□□□ -0.3
TVP23C-206ENST00000521179 EMILIN3Q9NT22 766 aa13.15□□□□□ -0.3
TVP23C-206ENST00000521179 ARIH1Q9Y4X5 557 aaPredicted RBP13.15□□□□□ -0.3
TVP23C-206ENST00000521179 SNPHO15079 494 aa13.14□□□□□ -0.31
TVP23C-206ENST00000521179 PTCD2Q8WV60 388 aaKnown RBP13.13□□□□□ -0.31
TVP23C-206ENST00000521179 DOK7Q18PE1 504 aa13.12□□□□□ -0.31
TVP23C-206ENST00000521179 OXER1Q8TDS5 423 aa13.12□□□□□ -0.31
TVP23C-206ENST00000521179 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
TVP23C-206ENST00000521179 ABCC9O60706 1549 aa13.12□□□□□ -0.31
TVP23C-206ENST00000521179 ZSWIM6Q9HCJ5 1215 aa13.07□□□□□ -0.32
TVP23C-206ENST00000521179 UPF1Q92900 1129 aaKnown RBP eCLIP13.06□□□□□ -0.32
TVP23C-206ENST00000521179 RIMBP2O15034 1052 aa13.05□□□□□ -0.32
TVP23C-206ENST00000521179 TBC1D12O60347 775 aa13.05□□□□□ -0.32
TVP23C-206ENST00000521179 PCDHGA4Q9Y5G9 962 aa13.05□□□□□ -0.32
TVP23C-206ENST00000521179 DPYSL4O14531 572 aa13.04□□□□□ -0.32
TVP23C-206ENST00000521179 MAP3K9P80192 1104 aa13.04□□□□□ -0.32
TVP23C-206ENST00000521179 GPR153Q6NV75 609 aa13.02□□□□□ -0.33
TVP23C-206ENST00000521179 ZNF710Q8N1W2 664 aa13.02□□□□□ -0.33
TVP23C-206ENST00000521179 KDM4FA0A1W2PPD8 638 aa12.99□□□□□ -0.33
TVP23C-206ENST00000521179 SPDYE16A6NNV3 312 aaPredicted RBP12.99□□□□□ -0.33
TVP23C-206ENST00000521179 PDIA6Q15084 440 aa12.98□□□□□ -0.33
TVP23C-206ENST00000521179 ARSIQ5FYB1 569 aa12.98□□□□□ -0.33
TVP23C-206ENST00000521179 HOXB1P14653 301 aaPredicted RBP12.97□□□□□ -0.33
TVP23C-206ENST00000521179 ANO8Q9HCE9 1232 aaPredicted RBP12.97□□□□□ -0.33
TVP23C-206ENST00000521179 EVI5O60447 810 aa12.96□□□□□ -0.33
TVP23C-206ENST00000521179 KHSRPQ92945 711 aaKnown RBP eCLIP12.95□□□□□ -0.34
TVP23C-206ENST00000521179 ST18O60284 1047 aa12.94□□□□□ -0.34
TVP23C-206ENST00000521179 NBR1Q14596 966 aa12.92□□□□□ -0.34
TVP23C-206ENST00000521179 FAM163AQ96GL9 167 aaPredicted RBP12.92□□□□□ -0.34
TVP23C-206ENST00000521179 BCANQ96GW7 911 aa12.92□□□□□ -0.34
TVP23C-206ENST00000521179 NUDT7P0C024 238 aa12.91□□□□□ -0.34
TVP23C-206ENST00000521179 ZNF316A6NFI3 1004 aaPredicted RBP12.9□□□□□ -0.34
TVP23C-206ENST00000521179 PTGER2P43116 358 aa12.9□□□□□ -0.34
TVP23C-206ENST00000521179 CCDC180Q9P1Z9 1646 aa12.89□□□□□ -0.35
TVP23C-206ENST00000521179 SEMA3EO15041 775 aa12.89□□□□□ -0.35
TVP23C-206ENST00000521179 TESPA1A2RU30 521 aaPredicted RBP12.87□□□□□ -0.35
TVP23C-206ENST00000521179 LCE2DQ5TA82 110 aaPredicted RBP12.87□□□□□ -0.35
TVP23C-206ENST00000521179 LHX6Q9UPM6 363 aa12.83□□□□□ -0.36
TVP23C-206ENST00000521179 MLLT3P42568 568 aaPredicted RBP12.82□□□□□ -0.36
TVP23C-206ENST00000521179 DDX12PQ92771 950 aa12.8□□□□□ -0.36
TVP23C-206ENST00000521179 PHF14O94880 888 aa12.79□□□□□ -0.36
TVP23C-206ENST00000521179 SMYD5Q6GMV2 418 aa12.79□□□□□ -0.36
TVP23C-206ENST00000521179 MARVELD3Q96A59 401 aa12.79□□□□□ -0.36
TVP23C-206ENST00000521179 PSDA5PKW4 1024 aaPredicted RBP12.78□□□□□ -0.36
TVP23C-206ENST00000521179 GRXCR2A6NFK2 248 aa12.78□□□□□ -0.36
TVP23C-206ENST00000521179 FOSBP53539 338 aa12.78□□□□□ -0.36
TVP23C-206ENST00000521179 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
TVP23C-206ENST00000521179 EMP3P54852 163 aa12.77□□□□□ -0.37
TVP23C-206ENST00000521179 PCDHGA10Q9Y5H3 936 aa12.77□□□□□ -0.37
TVP23C-206ENST00000521179 EPAS1Q99814 870 aa12.76□□□□□ -0.37
TVP23C-206ENST00000521179 ERBB3P21860 1342 aa12.75□□□□□ -0.37
TVP23C-206ENST00000521179 OSBPP22059 807 aa12.75□□□□□ -0.37
TVP23C-206ENST00000521179 ZNF454Q8N9F8 522 aa12.74□□□□□ -0.37
TVP23C-206ENST00000521179 TYW1BQ6NUM6 668 aa12.73□□□□□ -0.37
TVP23C-206ENST00000521179 TULP1O00294 542 aaPredicted RBP12.72□□□□□ -0.37
TVP23C-206ENST00000521179 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.72□□□□□ -0.37
TVP23C-206ENST00000521179 FBXW7Q969H0 707 aa12.72□□□□□ -0.37
TVP23C-206ENST00000521179 PPP4R3BQ5MIZ7 849 aa12.71□□□□□ -0.37
TVP23C-206ENST00000521179 ZDHHC16Q969W1 377 aa12.71□□□□□ -0.37
TVP23C-206ENST00000521179 FAM205CA6NFA0 338 aa12.7□□□□□ -0.38
TVP23C-206ENST00000521179 PRIM1P49642 420 aaKnown RBP12.7□□□□□ -0.38
TVP23C-206ENST00000521179 VARS2Q5ST30 1063 aaKnown RBP12.7□□□□□ -0.38
TVP23C-206ENST00000521179 POTEB3A0JP26 581 aa12.68□□□□□ -0.38
TVP23C-206ENST00000521179 EN1Q05925 392 aaPredicted RBP12.68□□□□□ -0.38
TVP23C-206ENST00000521179 POTEBQ6S5H4 581 aa12.68□□□□□ -0.38
TVP23C-206ENST00000521179 HS3ST6Q96QI5 342 aa12.67□□□□□ -0.38
TVP23C-206ENST00000521179 RBM26Q5T8P6 1007 aaKnown RBP12.66□□□□□ -0.38
TVP23C-206ENST00000521179 ADAM33Q9BZ11 813 aa12.66□□□□□ -0.38
TVP23C-206ENST00000521179 ZNF687Q8N1G0 1237 aa12.65□□□□□ -0.38
TVP23C-206ENST00000521179 BCL2L12Q9HB09 334 aa12.65□□□□□ -0.38
TVP23C-206ENST00000521179 LMOD2Q6P5Q4 547 aa12.64□□□□□ -0.39
TVP23C-206ENST00000521179 RBM33Q96EV2 1170 aaKnown RBP12.63□□□□□ -0.39
TVP23C-206ENST00000521179 MAP3K7O43318 606 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms