RNA–Protein interactions for RNA: ENST00000520867.5

CPEB4-208, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-208ENST00000520867 KIAA1211Q6ZU35 1233 aa16.68■□□□□ 0.26
CPEB4-208ENST00000520867 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
CPEB4-208ENST00000520867 HOMEZQ8IX15 550 aa16.68■□□□□ 0.26
CPEB4-208ENST00000520867 RNF123Q5XPI4 1314 aa16.68■□□□□ 0.26
CPEB4-208ENST00000520867 TULP1O00294 542 aaPredicted RBP16.67■□□□□ 0.26
CPEB4-208ENST00000520867 MS4A1P11836 297 aa16.67■□□□□ 0.26
CPEB4-208ENST00000520867 ZSCAN20P17040 1043 aaPredicted RBP16.67■□□□□ 0.26
CPEB4-208ENST00000520867 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
CPEB4-208ENST00000520867 ZBED9Q6R2W3 1325 aa16.67■□□□□ 0.26
CPEB4-208ENST00000520867 ANP32BQ92688 251 aaKnown RBP16.66■□□□□ 0.26
CPEB4-208ENST00000520867 RGS22Q8NE09 1264 aa16.66■□□□□ 0.26
CPEB4-208ENST00000520867 SOGA1O94964 1423 aa16.66■□□□□ 0.26
CPEB4-208ENST00000520867 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
CPEB4-208ENST00000520867 CEP164Q9UPV0 1460 aa16.65■□□□□ 0.26
CPEB4-208ENST00000520867 FAM13BQ9NYF5 915 aa16.63■□□□□ 0.25
CPEB4-208ENST00000520867 BCCIPQ9P287 314 aaKnown RBP eCLIP16.63■□□□□ 0.25
CPEB4-208ENST00000520867 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
CPEB4-208ENST00000520867 FSD2A1L4K1 749 aa16.63■□□□□ 0.25
CPEB4-208ENST00000520867 KCNG1Q9UIX4 513 aa16.62■□□□□ 0.25
CPEB4-208ENST00000520867 CCDC184Q52MB2 194 aa16.59■□□□□ 0.25
CPEB4-208ENST00000520867 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.59■□□□□ 0.25
CPEB4-208ENST00000520867 GOLGA6L3A6NEY3 463 aa16.58■□□□□ 0.25
CPEB4-208ENST00000520867 KIF20AO95235 890 aa16.58■□□□□ 0.25
CPEB4-208ENST00000520867 ARID3AQ99856 593 aa16.58■□□□□ 0.25
CPEB4-208ENST00000520867 VGFO15240 615 aaPredicted RBP16.58■□□□□ 0.24
CPEB4-208ENST00000520867 ZBTB22O15209 634 aa16.57■□□□□ 0.24
CPEB4-208ENST00000520867 RRBP1Q9P2E9 1410 aaKnown RBP16.57■□□□□ 0.24
CPEB4-208ENST00000520867 CNPY4Q8N129 248 aa16.56■□□□□ 0.24
CPEB4-208ENST00000520867 SMG6Q86US8 1419 aaKnown RBP16.56■□□□□ 0.24
CPEB4-208ENST00000520867 IRX3P78415 501 aaPredicted RBP16.55■□□□□ 0.24
CPEB4-208ENST00000520867 CNKSR2Q8WXI2 1034 aa16.53■□□□□ 0.24
CPEB4-208ENST00000520867 TNNT2P45379 298 aaPredicted RBP16.53■□□□□ 0.24
CPEB4-208ENST00000520867 TERF1P54274 439 aa16.52■□□□□ 0.24
CPEB4-208ENST00000520867 AMER1Q5JTC6 1135 aaPredicted RBP16.52■□□□□ 0.24
CPEB4-208ENST00000520867 RAB3GAP2Q9H2M9 1393 aa16.51■□□□□ 0.23
CPEB4-208ENST00000520867 E9PSI1 815 aa16.5■□□□□ 0.23
CPEB4-208ENST00000520867 FAM9BQ8IZU0 186 aa16.5■□□□□ 0.23
CPEB4-208ENST00000520867 RUSC2Q8N2Y8 1516 aa16.5■□□□□ 0.23
CPEB4-208ENST00000520867 MTERF4Q7Z6M4 381 aaKnown RBP16.49■□□□□ 0.23
CPEB4-208ENST00000520867 OFD1O75665 1012 aa16.49■□□□□ 0.23
CPEB4-208ENST00000520867 GTPBP4Q9BZE4 634 aaKnown RBP16.49■□□□□ 0.23
CPEB4-208ENST00000520867 LETM1O95202 739 aaPredicted RBP16.49■□□□□ 0.23
CPEB4-208ENST00000520867 MYH16Q9H6N6 1097 aa16.49■□□□□ 0.23
CPEB4-208ENST00000520867 CDK11BP21127 795 aaKnown RBP16.48■□□□□ 0.23
CPEB4-208ENST00000520867 DNTTIP2Q5QJE6 756 aaKnown RBP16.48■□□□□ 0.23
CPEB4-208ENST00000520867 SLC52A1Q9NWF4 448 aa16.48■□□□□ 0.23
CPEB4-208ENST00000520867 MAPK8IP2Q13387 824 aaPredicted RBP16.48■□□□□ 0.23
CPEB4-208ENST00000520867 NUDCQ9Y266 331 aa16.47■□□□□ 0.23
CPEB4-208ENST00000520867 CCDC94Q9BW85 323 aaPredicted RBP16.46■□□□□ 0.22
CPEB4-208ENST00000520867 MRE11P49959 708 aa16.45■□□□□ 0.22
CPEB4-208ENST00000520867 SKAP1Q86WV1 359 aa16.45■□□□□ 0.22
CPEB4-208ENST00000520867 CERS3Q8IU89 383 aa16.45■□□□□ 0.22
CPEB4-208ENST00000520867 KIF21BO75037 1637 aa16.44■□□□□ 0.22
CPEB4-208ENST00000520867 MMP14P50281 582 aa16.43■□□□□ 0.22
CPEB4-208ENST00000520867 WWC1Q8IX03 1113 aa16.43■□□□□ 0.22
CPEB4-208ENST00000520867 CCNB3Q8WWL7 1395 aa16.43■□□□□ 0.22
CPEB4-208ENST00000520867 TAF3Q5VWG9 929 aa16.42■□□□□ 0.22
CPEB4-208ENST00000520867 EXOC6Q8TAG9 804 aa16.42■□□□□ 0.22
CPEB4-208ENST00000520867 TRIM44Q96DX7 344 aaPredicted RBP16.42■□□□□ 0.22
CPEB4-208ENST00000520867 TMC1Q8TDI8 760 aa16.42■□□□□ 0.22
CPEB4-208ENST00000520867 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.41■□□□□ 0.22
CPEB4-208ENST00000520867 C14orf37Q86TY3 774 aa16.4■□□□□ 0.22
CPEB4-208ENST00000520867 GZF1Q9H116 711 aaPredicted RBP16.4■□□□□ 0.22
CPEB4-208ENST00000520867 MRS2Q9HD23 443 aa16.4■□□□□ 0.22
CPEB4-208ENST00000520867 CGNQ9P2M7 1197 aaKnown RBP16.39■□□□□ 0.21
CPEB4-208ENST00000520867 IRX5P78411 483 aaPredicted RBP16.39■□□□□ 0.21
CPEB4-208ENST00000520867 GRPEL1Q9HAV7 217 aa16.39■□□□□ 0.21
CPEB4-208ENST00000520867 UQCRHLA0A096LP55 91 aa16.38■□□□□ 0.21
CPEB4-208ENST00000520867 UQCRHP07919 91 aa16.38■□□□□ 0.21
CPEB4-208ENST00000520867 HDAC5Q9UQL6 1122 aa16.38■□□□□ 0.21
CPEB4-208ENST00000520867 R3HCC1Q9Y3T6 440 aaKnown RBP16.38■□□□□ 0.21
CPEB4-208ENST00000520867 MYCNP04198 464 aaPredicted RBP16.37■□□□□ 0.21
CPEB4-208ENST00000520867 PSEN1P49768 467 aa16.37■□□□□ 0.21
CPEB4-208ENST00000520867 HSP90B1P14625 803 aaKnown RBP16.36■□□□□ 0.21
CPEB4-208ENST00000520867 SLC20A2Q08357 652 aa16.36■□□□□ 0.21
CPEB4-208ENST00000520867 NGEFQ8N5V2 710 aa16.36■□□□□ 0.21
CPEB4-208ENST00000520867 SETD5Q9C0A6 1442 aa16.36■□□□□ 0.21
CPEB4-208ENST00000520867 DYNC1I1O14576 645 aa16.35■□□□□ 0.21
CPEB4-208ENST00000520867 SOX12O15370 315 aa16.35■□□□□ 0.21
CPEB4-208ENST00000520867 KANK4Q5T7N3 995 aaPredicted RBP16.34■□□□□ 0.21
CPEB4-208ENST00000520867 AEBP1Q8IUX7 1158 aa16.33■□□□□ 0.21
CPEB4-208ENST00000520867 CNTLNQ9NXG0 1405 aa16.33■□□□□ 0.2
CPEB4-208ENST00000520867 PRKRIP1Q9H875 184 aaPredicted RBP16.32■□□□□ 0.2
CPEB4-208ENST00000520867 C8orf34Q49A92 452 aa16.32■□□□□ 0.2
CPEB4-208ENST00000520867 CLGNO14967 610 aa16.32■□□□□ 0.2
CPEB4-208ENST00000520867 ZSCAN30Q86W11 494 aa16.32■□□□□ 0.2
CPEB4-208ENST00000520867 P3H3Q8IVL6 736 aa16.32■□□□□ 0.2
CPEB4-208ENST00000520867 FHAD1B1AJZ9 1412 aa16.31■□□□□ 0.2
CPEB4-208ENST00000520867 CBX1P83916 185 aa16.31■□□□□ 0.2
CPEB4-208ENST00000520867 WIZO95785 1651 aa16.31■□□□□ 0.2
CPEB4-208ENST00000520867 NCOA2Q15596 1464 aa16.31■□□□□ 0.2
CPEB4-208ENST00000520867 MROH2BQ7Z745 1585 aa16.31■□□□□ 0.2
CPEB4-208ENST00000520867 SLKQ9H2G2 1235 aaPredicted RBP16.31■□□□□ 0.2
CPEB4-208ENST00000520867 CHMP4CQ96CF2 233 aa16.3■□□□□ 0.2
CPEB4-208ENST00000520867 ANTXR1Q9H6X2 564 aa16.3■□□□□ 0.2
CPEB4-208ENST00000520867 RRP1P56182 461 aaKnown RBP16.29■□□□□ 0.2
CPEB4-208ENST00000520867 BAZ1AQ9NRL2 1556 aaPredicted RBP16.29■□□□□ 0.2
CPEB4-208ENST00000520867 TONSLQ96HA7 1378 aa16.28■□□□□ 0.2
CPEB4-208ENST00000520867 TMED8Q6PL24 325 aaPredicted RBP16.28■□□□□ 0.2
CPEB4-208ENST00000520867 FAM193AP78312 1265 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms