RNA–Protein interactions for RNA: ENST00000520371.5

CCNC-209, Transcript of cyclin C, humanhuman

TSL 5 BASIC

Gene CCNC, Length 2,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-209ENST00000520371 ARID3CA6NKF2 412 aa23■■□□□ 1.27
CCNC-209ENST00000520371 EIF4G3O43432 1585 aaKnown RBP22.98■■□□□ 1.27
CCNC-209ENST00000520371 ANKRD30BQ9BXX2 1392 aa22.98■■□□□ 1.27
CCNC-209ENST00000520371 FKBP8Q14318 412 aa22.97■■□□□ 1.27
CCNC-209ENST00000520371 RPRD2Q5VT52 1461 aaKnown RBP22.97■■□□□ 1.27
CCNC-209ENST00000520371 TROQ12816 1431 aaPredicted RBP22.97■■□□□ 1.27
CCNC-209ENST00000520371 L3MBTL2Q969R5 705 aa22.97■■□□□ 1.27
CCNC-209ENST00000520371 WASHC2AQ641Q2 1341 aa22.95■■□□□ 1.26
CCNC-209ENST00000520371 SYNJ2O15056 1496 aa22.92■■□□□ 1.26
CCNC-209ENST00000520371 CARMIL2Q6F5E8 1435 aa22.91■■□□□ 1.26
CCNC-209ENST00000520371 CHMP7Q8WUX9 453 aaPredicted RBP22.91■■□□□ 1.26
CCNC-209ENST00000520371 TSHZ2Q9NRE2 1034 aa22.91■■□□□ 1.26
CCNC-209ENST00000520371 ITSN2Q9NZM3 1697 aa22.9■■□□□ 1.26
CCNC-209ENST00000520371 SLC4A1APQ9BWU0 796 aaKnown RBP22.9■■□□□ 1.26
CCNC-209ENST00000520371 CNTLNQ9NXG0 1405 aa22.9■■□□□ 1.26
CCNC-209ENST00000520371 CFDP1Q9UEE9 299 aaPredicted RBP22.89■■□□□ 1.26
CCNC-209ENST00000520371 ZNF644Q9H582 1327 aaPredicted RBP22.89■■□□□ 1.25
CCNC-209ENST00000520371 NCOA1Q15788 1441 aa22.88■■□□□ 1.25
CCNC-209ENST00000520371 CAMSAP2Q08AD1 1489 aa22.88■■□□□ 1.25
CCNC-209ENST00000520371 ERCC6Q03468 1493 aa22.87■■□□□ 1.25
CCNC-209ENST00000520371 TEX14Q8IWB6 1497 aa22.87■■□□□ 1.25
CCNC-209ENST00000520371 PRG4Q92954 1404 aaPredicted RBP22.87■■□□□ 1.25
CCNC-209ENST00000520371 ADCY10Q96PN6 1610 aa22.86■■□□□ 1.25
CCNC-209ENST00000520371 FOXD1Q16676 465 aa22.86■■□□□ 1.25
CCNC-209ENST00000520371 ADGRL2O95490 1459 aa22.85■■□□□ 1.25
CCNC-209ENST00000520371 GPATCH8Q9UKJ3 1502 aaKnown RBP22.85■■□□□ 1.25
CCNC-209ENST00000520371 CCDC7Q96M83 1385 aa22.85■■□□□ 1.25
CCNC-209ENST00000520371 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
CCNC-209ENST00000520371 BCANQ96GW7 911 aa22.83■■□□□ 1.24
CCNC-209ENST00000520371 ADGBQ8N7X0 1667 aa22.82■■□□□ 1.24
CCNC-209ENST00000520371 NUP160Q12769 1436 aa22.82■■□□□ 1.24
CCNC-209ENST00000520371 PLB1Q6P1J6 1458 aa22.82■■□□□ 1.24
CCNC-209ENST00000520371 HNRNPUQ00839 825 aaKnown RBP eCLIP22.81■■□□□ 1.24
CCNC-209ENST00000520371 ANKRD30AQ9BXX3 1397 aa22.81■■□□□ 1.24
CCNC-209ENST00000520371 PZPP20742 1482 aa22.8■■□□□ 1.24
CCNC-209ENST00000520371 JPH4Q96JJ6 628 aa22.79■■□□□ 1.24
CCNC-209ENST00000520371 NBPF8Q3BBV2 869 aa22.79■■□□□ 1.24
CCNC-209ENST00000520371 SPATA31E1Q6ZUB1 1445 aa22.78■■□□□ 1.24
CCNC-209ENST00000520371 KIAA1107Q9UPP5 1409 aa22.77■■□□□ 1.24
CCNC-209ENST00000520371 CROCC2H7BZ55 1655 aa22.75■■□□□ 1.23
CCNC-209ENST00000520371 PLEKHD1A6NEE1 506 aa22.75■■□□□ 1.23
CCNC-209ENST00000520371 PRKRIP1Q9H875 184 aaPredicted RBP22.74■■□□□ 1.23
CCNC-209ENST00000520371 KIF14Q15058 1648 aa22.74■■□□□ 1.23
CCNC-209ENST00000520371 FBLN2P98095 1184 aa22.73■■□□□ 1.23
CCNC-209ENST00000520371 C11orf95C9JLR9 678 aaPredicted RBP22.73■■□□□ 1.23
CCNC-209ENST00000520371 ZNF777Q9ULD5 760 aaPredicted RBP22.73■■□□□ 1.23
CCNC-209ENST00000520371 SHANK2Q9UPX8 1470 aa22.73■■□□□ 1.23
CCNC-209ENST00000520371 ERICH6BQ5W0A0 696 aa22.7■■□□□ 1.23
CCNC-209ENST00000520371 ABCA8O94911 1581 aa22.7■■□□□ 1.22
CCNC-209ENST00000520371 MBD5Q9P267 1494 aa22.7■■□□□ 1.22
CCNC-209ENST00000520371 ANKRD50Q9ULJ7 1429 aa22.7■■□□□ 1.22
CCNC-209ENST00000520371 KIF7Q2M1P5 1343 aa22.7■■□□□ 1.22
CCNC-209ENST00000520371 POLR1AO95602 1720 aaPredicted RBP22.7■■□□□ 1.22
CCNC-209ENST00000520371 ARID4BQ4LE39 1312 aaPredicted RBP22.68■■□□□ 1.22
CCNC-209ENST00000520371 PKD2Q13563 968 aa22.67■■□□□ 1.22
CCNC-209ENST00000520371 ABCC10Q5T3U5 1492 aa22.67■■□□□ 1.22
CCNC-209ENST00000520371 ATP10BO94823 1461 aa22.65■■□□□ 1.22
CCNC-209ENST00000520371 MRS2Q9HD23 443 aa22.65■■□□□ 1.22
CCNC-209ENST00000520371 C9orf84Q5VXU9 1444 aa22.64■■□□□ 1.21
CCNC-209ENST00000520371 TSPY4P0CV99 314 aa22.63■■□□□ 1.21
CCNC-209ENST00000520371 TSPY10P0CW01 314 aa22.63■■□□□ 1.21
CCNC-209ENST00000520371 UHRF1BP1Q6BDS2 1440 aa22.61■■□□□ 1.21
CCNC-209ENST00000520371 KDM5DQ9BY66 1539 aa22.61■■□□□ 1.21
CCNC-209ENST00000520371 ZBED9Q6R2W3 1325 aa22.61■■□□□ 1.21
CCNC-209ENST00000520371 CDC42BPAQ5VT25 1732 aa22.6■■□□□ 1.21
CCNC-209ENST00000520371 USP47Q96K76 1375 aa22.6■■□□□ 1.21
CCNC-209ENST00000520371 NUP155O75694 1391 aa22.6■■□□□ 1.21
CCNC-209ENST00000520371 ARHGEF12Q9NZN5 1544 aa22.58■■□□□ 1.21
CCNC-209ENST00000520371 CCDC184Q52MB2 194 aa22.58■■□□□ 1.21
CCNC-209ENST00000520371 ARHGEF5Q12774 1597 aa22.58■■□□□ 1.21
CCNC-209ENST00000520371 ROCK2O75116 1388 aaKnown RBP22.57■■□□□ 1.2
CCNC-209ENST00000520371 RSPH4AQ5TD94 716 aa22.57■■□□□ 1.2
CCNC-209ENST00000520371 FAM9BQ8IZU0 186 aa22.57■■□□□ 1.2
CCNC-209ENST00000520371 RALGAPBQ86X10 1494 aa22.55■■□□□ 1.2
CCNC-209ENST00000520371 PTPRGP23470 1445 aa22.53■■□□□ 1.2
CCNC-209ENST00000520371 KIF15Q9NS87 1388 aa22.53■■□□□ 1.2
CCNC-209ENST00000520371 KDM5CP41229 1560 aa22.52■■□□□ 1.2
CCNC-209ENST00000520371 RBM19Q9Y4C8 960 aaKnown RBP22.52■■□□□ 1.2
CCNC-209ENST00000520371 DHX29Q7Z478 1369 aaKnown RBP22.51■■□□□ 1.19
CCNC-209ENST00000520371 ZNF326Q5BKZ1 582 aaKnown RBP22.51■■□□□ 1.19
CCNC-209ENST00000520371 PPP4R2Q9NY27 417 aa22.49■■□□□ 1.19
CCNC-209ENST00000520371 CCDC141Q6ZP82 1450 aa22.48■■□□□ 1.19
CCNC-209ENST00000520371 ANP32EQ9BTT0 268 aa22.48■■□□□ 1.19
CCNC-209ENST00000520371 HNRNPMP52272 730 aaKnown RBP eCLIP22.46■■□□□ 1.198e-10■■■■□ 20.8
CCNC-209ENST00000520371 CARD11Q9BXL7 1154 aa22.46■■□□□ 1.19
CCNC-209ENST00000520371 BCORL1Q5H9F3 1711 aa22.45■■□□□ 1.18
CCNC-209ENST00000520371 KTN1Q86UP2 1357 aaKnown RBP22.43■■□□□ 1.18
CCNC-209ENST00000520371 PREX2Q70Z35 1606 aa22.43■■□□□ 1.18
CCNC-209ENST00000520371 IRX6P78412 446 aaPredicted RBP22.42■■□□□ 1.18
CCNC-209ENST00000520371 POLR3GLQ9BT43 218 aa22.4■■□□□ 1.18
CCNC-209ENST00000520371 SAMD9LQ8IVG5 1584 aa22.4■■□□□ 1.18
CCNC-209ENST00000520371 SMG6Q86US8 1419 aaKnown RBP22.39■■□□□ 1.17
CCNC-209ENST00000520371 FAM135AQ9P2D6 1515 aa22.39■■□□□ 1.17
CCNC-209ENST00000520371 DCAF11Q8TEB1 546 aa22.38■■□□□ 1.17
CCNC-209ENST00000520371 MAST1Q9Y2H9 1570 aa22.38■■□□□ 1.17
CCNC-209ENST00000520371 PLEKHH2Q8IVE3 1493 aa22.36■■□□□ 1.17
CCNC-209ENST00000520371 CDC42BPBQ9Y5S2 1711 aa22.35■■□□□ 1.17
CCNC-209ENST00000520371 KDM2AQ9Y2K7 1162 aa22.35■■□□□ 1.17
CCNC-209ENST00000520371 CCDC144AA2RUR9 1427 aa22.34■■□□□ 1.17
CCNC-209ENST00000520371 RALBP1Q15311 655 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms