RNA–Protein interactions for RNA: ENST00000520022.2

ARFGAP1-213, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 4

Gene ARFGAP1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-213ENST00000520022 FYCO1Q9BQS8 1478 aa28.31■■■□□ 2.12
ARFGAP1-213ENST00000520022 ARHGAP5Q13017 1502 aa28.31■■■□□ 2.12
ARFGAP1-213ENST00000520022 ADAMTSL3P82987 1691 aa28.31■■■□□ 2.12
ARFGAP1-213ENST00000520022 ZMYM4Q5VZL5 1548 aa28.3■■■□□ 2.12
ARFGAP1-213ENST00000520022 ZFYVE16Q7Z3T8 1539 aa28.29■■■□□ 2.12
ARFGAP1-213ENST00000520022 HECW2Q9P2P5 1572 aa28.28■■■□□ 2.12
ARFGAP1-213ENST00000520022 BCORL1Q5H9F3 1711 aa28.28■■■□□ 2.12
ARFGAP1-213ENST00000520022 PTPRMP28827 1452 aa28.27■■■□□ 2.12
ARFGAP1-213ENST00000520022 AFAP1Q8N556 730 aa28.26■■■□□ 2.11
ARFGAP1-213ENST00000520022 MAGI2Q86UL8 1455 aa28.26■■■□□ 2.11
ARFGAP1-213ENST00000520022 MLECQ14165 292 aa28.23■■■□□ 2.11
ARFGAP1-213ENST00000520022 MYT1LQ9UL68 1186 aa28.22■■■□□ 2.11
ARFGAP1-213ENST00000520022 CDC42BPBQ9Y5S2 1711 aa28.22■■■□□ 2.11
ARFGAP1-213ENST00000520022 MADDQ8WXG6 1647 aa28.21■■■□□ 2.11
ARFGAP1-213ENST00000520022 SIGLEC1Q9BZZ2 1709 aa28.2■■■□□ 2.1
ARFGAP1-213ENST00000520022 PLPPR3Q6T4P5 718 aa28.18■■■□□ 2.1
ARFGAP1-213ENST00000520022 CEP162Q5TB80 1403 aa28.18■■■□□ 2.1
ARFGAP1-213ENST00000520022 ATP10AO60312 1499 aa28.17■■■□□ 2.1
ARFGAP1-213ENST00000520022 ZNF518AQ6AHZ1 1483 aa28.17■■■□□ 2.1
ARFGAP1-213ENST00000520022 LOC105371045A0A1W2PR82 267 aa28.17■■■□□ 2.1
ARFGAP1-213ENST00000520022 ZNF777Q9ULD5 760 aaPredicted RBP28.16■■■□□ 2.1
ARFGAP1-213ENST00000520022 PREX2Q70Z35 1606 aa28.16■■■□□ 2.1
ARFGAP1-213ENST00000520022 RIMS1Q86UR5 1692 aaKnown RBP28.13■■■□□ 2.09
ARFGAP1-213ENST00000520022 ARHGEF12Q9NZN5 1544 aa28.13■■■□□ 2.09
ARFGAP1-213ENST00000520022 TRAPPC8Q9Y2L5 1435 aa28.12■■■□□ 2.09
ARFGAP1-213ENST00000520022 CDC42BPAQ5VT25 1732 aa28.12■■■□□ 2.09
ARFGAP1-213ENST00000520022 C9orf84Q5VXU9 1444 aa28.1■■■□□ 2.09
ARFGAP1-213ENST00000520022 KDM5CP41229 1560 aa28.1■■■□□ 2.09
ARFGAP1-213ENST00000520022 MTUS2Q5JR59 1369 aa28.1■■■□□ 2.09
ARFGAP1-213ENST00000520022 ABCC1P33527 1531 aa28.08■■■□□ 2.09
ARFGAP1-213ENST00000520022 GPATCH8Q9UKJ3 1502 aaKnown RBP28.08■■■□□ 2.09
ARFGAP1-213ENST00000520022 CCNB3Q8WWL7 1395 aa28.04■■■□□ 2.08
ARFGAP1-213ENST00000520022 HNRNPMP52272 730 aaKnown RBP eCLIP28.04■■■□□ 2.08
ARFGAP1-213ENST00000520022 CFDP1Q9UEE9 299 aaPredicted RBP28.04■■■□□ 2.08
ARFGAP1-213ENST00000520022 ITSN2Q9NZM3 1697 aa28.03■■■□□ 2.08
ARFGAP1-213ENST00000520022 MLH3Q9UHC1 1453 aa28.03■■■□□ 2.08
ARFGAP1-213ENST00000520022 DIP2CQ9Y2E4 1556 aa28.01■■■□□ 2.07
ARFGAP1-213ENST00000520022 SAMD9LQ8IVG5 1584 aa28■■■□□ 2.07
ARFGAP1-213ENST00000520022 FER1L4A9Z1Z3 1794 aa27.99■■■□□ 2.07
ARFGAP1-213ENST00000520022 ABCA6Q8N139 1617 aa27.98■■■□□ 2.07
ARFGAP1-213ENST00000520022 CEBPAP49715 358 aaPredicted RBP27.96■■■□□ 2.07
ARFGAP1-213ENST00000520022 SYCP2Q9BX26 1530 aa27.96■■■□□ 2.07
ARFGAP1-213ENST00000520022 LMTK3Q96Q04 1460 aa27.95■■■□□ 2.06
ARFGAP1-213ENST00000520022 KIDINS220Q9ULH0 1771 aa27.94■■■□□ 2.06
ARFGAP1-213ENST00000520022 SPAG9O60271 1321 aaKnown RBP27.93■■■□□ 2.06
ARFGAP1-213ENST00000520022 ZNF644Q9H582 1327 aaPredicted RBP27.93■■■□□ 2.06
ARFGAP1-213ENST00000520022 HSPA2P54652 639 aa27.93■■■□□ 2.06
ARFGAP1-213ENST00000520022 EHBP1L1Q8N3D4 1523 aa27.92■■■□□ 2.06
ARFGAP1-213ENST00000520022 KIAA1107Q9UPP5 1409 aa27.9■■■□□ 2.06
ARFGAP1-213ENST00000520022 REREQ9P2R6 1566 aa27.9■■■□□ 2.06
ARFGAP1-213ENST00000520022 ILDR1Q86SU0 546 aaPredicted RBP27.89■■■□□ 2.06
ARFGAP1-213ENST00000520022 TIAM1Q13009 1591 aa27.89■■■□□ 2.05
ARFGAP1-213ENST00000520022 PLEKHH2Q8IVE3 1493 aa27.89■■■□□ 2.05
ARFGAP1-213ENST00000520022 ESF1Q9H501 851 aaKnown RBP27.85■■■□□ 2.05
ARFGAP1-213ENST00000520022 AGLP35573 1532 aa27.85■■■□□ 2.05
ARFGAP1-213ENST00000520022 VPS8Q8N3P4 1428 aa27.84■■■□□ 2.05
ARFGAP1-213ENST00000520022 NCOA2Q15596 1464 aa27.82■■■□□ 2.04
ARFGAP1-213ENST00000520022 ATP7AQ04656 1500 aa27.8■■■□□ 2.04
ARFGAP1-213ENST00000520022 SUPT6HQ7KZ85 1726 aaKnown RBP27.78■■■□□ 2.04
ARFGAP1-213ENST00000520022 MBD5Q9P267 1494 aa27.76■■■□□ 2.04
ARFGAP1-213ENST00000520022 INO80Q9ULG1 1556 aaPredicted RBP27.75■■■□□ 2.03
ARFGAP1-213ENST00000520022 KANK4Q5T7N3 995 aaPredicted RBP27.75■■■□□ 2.03
ARFGAP1-213ENST00000520022 A2MP01023 1474 aa27.74■■■□□ 2.03
ARFGAP1-213ENST00000520022 LRRC9Q6ZRR7 1453 aa27.73■■■□□ 2.03
ARFGAP1-213ENST00000520022 GGT6Q6P531 493 aa27.71■■■□□ 2.03
ARFGAP1-213ENST00000520022 C3P01024 1663 aa27.71■■■□□ 2.03
ARFGAP1-213ENST00000520022 PREX1Q8TCU6 1659 aa27.7■■■□□ 2.02
ARFGAP1-213ENST00000520022 CAMSAP2Q08AD1 1489 aa27.69■■■□□ 2.02
ARFGAP1-213ENST00000520022 CNTLNQ9NXG0 1405 aa27.67■■■□□ 2.02
ARFGAP1-213ENST00000520022 UHRF1BP1Q6BDS2 1440 aa27.67■■■□□ 2.02
ARFGAP1-213ENST00000520022 SETD1BQ9UPS6 1966 aaKnown RBP27.66■■■□□ 2.02
ARFGAP1-213ENST00000520022 RTEL1-TNFRSF6BF6WH68 1400 aa27.66■■■□□ 2.02
ARFGAP1-213ENST00000520022 PLXNC1O60486 1568 aa27.65■■■□□ 2.02
ARFGAP1-213ENST00000520022 ZMYM3Q14202 1370 aa27.64■■■□□ 2.02
ARFGAP1-213ENST00000520022 CCDC141Q6ZP82 1450 aa27.64■■■□□ 2.01
ARFGAP1-213ENST00000520022 RSPH4AQ5TD94 716 aa27.63■■■□□ 2.01
ARFGAP1-213ENST00000520022 ADGBQ8N7X0 1667 aa27.62■■■□□ 2.01
ARFGAP1-213ENST00000520022 MAP3K1Q13233 1512 aa27.62■■■□□ 2.01
ARFGAP1-213ENST00000520022 DHX29Q7Z478 1369 aaKnown RBP27.6■■■□□ 2.01
ARFGAP1-213ENST00000520022 TSPY4P0CV99 314 aa27.59■■■□□ 2.01
ARFGAP1-213ENST00000520022 TSPY10P0CW01 314 aa27.59■■■□□ 2.01
ARFGAP1-213ENST00000520022 APLP2Q06481 763 aa27.59■■■□□ 2.01
ARFGAP1-213ENST00000520022 CLTCQ00610 1675 aaKnown RBP27.57■■■□□ 2
ARFGAP1-213ENST00000520022 KIF3BO15066 747 aa27.56■■■□□ 2
ARFGAP1-213ENST00000520022 FBXO41Q8TF61 875 aa27.55■■■□□ 2
ARFGAP1-213ENST00000520022 MROH2AA6NES4 1674 aa27.55■■■□□ 2
ARFGAP1-213ENST00000520022 PPP6R1Q9UPN7 881 aa27.53■■■□□ 2
ARFGAP1-213ENST00000520022 ARHGEF5Q12774 1597 aa27.52■■■□□ 2
ARFGAP1-213ENST00000520022 MYOM3Q5VTT5 1437 aa27.52■■■□□ 2
ARFGAP1-213ENST00000520022 NPATQ14207 1427 aa27.51■■□□□ 1.99
ARFGAP1-213ENST00000520022 STRCQ7RTU9 1775 aa27.5■■□□□ 1.99
ARFGAP1-213ENST00000520022 DMRT2Q9Y5R5 561 aa27.5■■□□□ 1.99
ARFGAP1-213ENST00000520022 MIA2Q96PC5 1412 aa27.48■■□□□ 1.99
ARFGAP1-213ENST00000520022 PTPRKQ15262 1439 aa27.47■■□□□ 1.99
ARFGAP1-213ENST00000520022 CERKQ8TCT0 537 aa27.44■■□□□ 1.98
ARFGAP1-213ENST00000520022 WASHC2CQ9Y4E1 1318 aa27.42■■□□□ 1.98
ARFGAP1-213ENST00000520022 FBXO31Q5XUX0 539 aaPredicted RBP27.41■■□□□ 1.98
ARFGAP1-213ENST00000520022 NCOA1Q15788 1441 aa27.38■■□□□ 1.97
ARFGAP1-213ENST00000520022 MAST1Q9Y2H9 1570 aa27.38■■□□□ 1.97
ARFGAP1-213ENST00000520022 NCKAP5LQ9HCH0 1330 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms