RNA–Protein interactions for RNA: ENST00000520022.2

ARFGAP1-213, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 4

Gene ARFGAP1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-213ENST00000520022 NISCHQ9Y2I1 1504 aa43.35■■■■■ 4.53
ARFGAP1-213ENST00000520022 CCDC180Q9P1Z9 1646 aa38.67■■■■□ 3.78
ARFGAP1-213ENST00000520022 ABCC9O60706 1549 aa38.58■■■■□ 3.77
ARFGAP1-213ENST00000520022 RB1CC1Q8TDY2 1594 aa36.74■■■■□ 3.47
ARFGAP1-213ENST00000520022 DCAF8L2P0C7V8 631 aa36.69■■■■□ 3.46
ARFGAP1-213ENST00000520022 NACADO15069 1562 aa36.54■■■■□ 3.44
ARFGAP1-213ENST00000520022 MYO15BQ96JP2 1530 aa36.08■■■■□ 3.37
ARFGAP1-213ENST00000520022 PABPN1Q86U42 306 aaKnown RBP eCLIP36.05■■■■□ 3.36
ARFGAP1-213ENST00000520022 DNAJC5BQ9UF47 199 aa36■■■■□ 3.35
ARFGAP1-213ENST00000520022 ZCCHC6Q5VYS8 1495 aaKnown RBP35.96■■■■□ 3.35
ARFGAP1-213ENST00000520022 UNC13AQ9UPW8 1703 aa35.9■■■■□ 3.34
ARFGAP1-213ENST00000520022 DCAF1Q9Y4B6 1507 aa35.74■■■■□ 3.31
ARFGAP1-213ENST00000520022 BICRAQ9NZM4 1560 aa35.68■■■■□ 3.3
ARFGAP1-213ENST00000520022 SCRIBQ14160 1630 aa35.39■■■■□ 3.26
ARFGAP1-213ENST00000520022 SHROOM4Q9ULL8 1493 aa35.1■■■■□ 3.21
ARFGAP1-213ENST00000520022 CC2D2AQ9P2K1 1620 aa34.8■■■■□ 3.16
ARFGAP1-213ENST00000520022 EIF4G1Q04637 1599 aaKnown RBP34.78■■■■□ 3.16
ARFGAP1-213ENST00000520022 CECR2Q9BXF3 1484 aa34.68■■■■□ 3.14
ARFGAP1-213ENST00000520022 NCAPD3P42695 1498 aa33.76■■■■□ 3
ARFGAP1-213ENST00000520022 SMARCA4P51532 1647 aa33.74■■■□□ 2.99
ARFGAP1-213ENST00000520022 ATAD2BQ9ULI0 1458 aa33.73■■■□□ 2.99
ARFGAP1-213ENST00000520022 SMARCA2P51531 1590 aa33.6■■■□□ 2.97
ARFGAP1-213ENST00000520022 BAZ1AQ9NRL2 1556 aaPredicted RBP33.6■■■□□ 2.97
ARFGAP1-213ENST00000520022 HMGXB3Q12766 1538 aa33.49■■■□□ 2.95
ARFGAP1-213ENST00000520022 MROH2BQ7Z745 1585 aa33.45■■■□□ 2.95
ARFGAP1-213ENST00000520022 BAZ1BQ9UIG0 1483 aaKnown RBP33.42■■■□□ 2.94
ARFGAP1-213ENST00000520022 PEG3Q9GZU2 1588 aa33.35■■■□□ 2.93
ARFGAP1-213ENST00000520022 ERCC6Q03468 1493 aa33.25■■■□□ 2.91
ARFGAP1-213ENST00000520022 NESP48681 1621 aa33.22■■■□□ 2.91
ARFGAP1-213ENST00000520022 WIZO95785 1651 aa33.06■■■□□ 2.88
ARFGAP1-213ENST00000520022 CUX2O14529 1486 aa33.02■■■□□ 2.88
ARFGAP1-213ENST00000520022 LAMC3Q9Y6N6 1575 aa32.92■■■□□ 2.86
ARFGAP1-213ENST00000520022 RSF1Q96T23 1441 aaPredicted RBP32.86■■■□□ 2.85
ARFGAP1-213ENST00000520022 CADPSQ9ULU8 1353 aa32.8■■■□□ 2.84
ARFGAP1-213ENST00000520022 DNAJC5Q9H3Z4 198 aa32.78■■■□□ 2.84
ARFGAP1-213ENST00000520022 PDS5BQ9NTI5 1447 aa32.77■■■□□ 2.84
ARFGAP1-213ENST00000520022 KIF21AQ7Z4S6 1674 aa32.72■■■□□ 2.83
ARFGAP1-213ENST00000520022 THOC2Q8NI27 1593 aaKnown RBP32.71■■■□□ 2.83
ARFGAP1-213ENST00000520022 TOP2AP11388 1531 aaKnown RBP32.61■■■□□ 2.81
ARFGAP1-213ENST00000520022 MRC2Q9UBG0 1479 aa32.47■■■□□ 2.79
ARFGAP1-213ENST00000520022 CFTRP13569 1480 aa32.45■■■□□ 2.79
ARFGAP1-213ENST00000520022 FANCD2Q9BXW9 1451 aa32.42■■■□□ 2.78
ARFGAP1-213ENST00000520022 CEP164Q9UPV0 1460 aa32.4■■■□□ 2.78
ARFGAP1-213ENST00000520022 WDR62O43379 1518 aa32.34■■■□□ 2.77
ARFGAP1-213ENST00000520022 CCDC88BA6NC98 1476 aa32.31■■■□□ 2.76
ARFGAP1-213ENST00000520022 URB2Q14146 1524 aaKnown RBP32.13■■■□□ 2.73
ARFGAP1-213ENST00000520022 PRDM2Q13029 1718 aa32.06■■■□□ 2.72
ARFGAP1-213ENST00000520022 TOPBP1Q92547 1522 aa31.83■■■□□ 2.69
ARFGAP1-213ENST00000520022 SUPT5HO00267 1087 aaKnown RBP31.79■■■□□ 2.68
ARFGAP1-213ENST00000520022 IFT140Q96RY7 1462 aa31.74■■■□□ 2.67
ARFGAP1-213ENST00000520022 ABCC8Q09428 1581 aa31.73■■■□□ 2.67
ARFGAP1-213ENST00000520022 ZNF608Q9ULD9 1512 aaPredicted RBP31.72■■■□□ 2.67
ARFGAP1-213ENST00000520022 DNMBPQ6XZF7 1577 aa31.7■■■□□ 2.67
ARFGAP1-213ENST00000520022 OSCARQ8IYS5 282 aa31.68■■■□□ 2.66
ARFGAP1-213ENST00000520022 TRIM41Q8WV44 630 aa31.56■■■□□ 2.64
ARFGAP1-213ENST00000520022 POLA1P09884 1462 aaPredicted RBP31.52■■■□□ 2.64
ARFGAP1-213ENST00000520022 AQRO60306 1485 aaKnown RBP eCLIP31.5■■■□□ 2.632e-9■■□□□ 13.9
ARFGAP1-213ENST00000520022 TARBP1Q13395 1621 aaKnown RBP31.49■■■□□ 2.63
ARFGAP1-213ENST00000520022 EIF4G3O43432 1585 aaKnown RBP31.48■■■□□ 2.63
ARFGAP1-213ENST00000520022 RAD54L2Q9Y4B4 1467 aa31.46■■■□□ 2.63
ARFGAP1-213ENST00000520022 SOGA1O94964 1423 aa31.43■■■□□ 2.62
ARFGAP1-213ENST00000520022 CUX1P39880 1505 aa31.39■■■□□ 2.62
ARFGAP1-213ENST00000520022 FGD5Q6ZNL6 1462 aa31.38■■■□□ 2.61
ARFGAP1-213ENST00000520022 TDRD9Q8NDG6 1382 aaKnown RBP31.37■■■□□ 2.61
ARFGAP1-213ENST00000520022 FBLN2P98095 1184 aa31.31■■■□□ 2.6
ARFGAP1-213ENST00000520022 CHD1O14646 1710 aa31.2■■■□□ 2.58
ARFGAP1-213ENST00000520022 RIMBP3CA6NJZ7 1639 aa31.16■■■□□ 2.58
ARFGAP1-213ENST00000520022 RIMBP3BA6NNM3 1639 aa31.16■■■□□ 2.58
ARFGAP1-213ENST00000520022 RIMBP3Q9UFD9 1639 aa31.16■■■□□ 2.58
ARFGAP1-213ENST00000520022 SNAPC4Q5SXM2 1469 aa31.13■■■□□ 2.57
ARFGAP1-213ENST00000520022 WDR97A6NE52 1622 aa31.1■■■□□ 2.57
ARFGAP1-213ENST00000520022 ARHGEF11O15085 1522 aa31.09■■■□□ 2.57
ARFGAP1-213ENST00000520022 GRIN2BQ13224 1484 aa31.08■■■□□ 2.57
ARFGAP1-213ENST00000520022 CHMP7Q8WUX9 453 aaPredicted RBP31.07■■■□□ 2.56
ARFGAP1-213ENST00000520022 GAPVD1Q14C86 1478 aa31.02■■■□□ 2.56
ARFGAP1-213ENST00000520022 MAGI1Q96QZ7 1491 aaPredicted RBP31.01■■■□□ 2.55
ARFGAP1-213ENST00000520022 ABCA10Q8WWZ4 1543 aa31■■■□□ 2.55
ARFGAP1-213ENST00000520022 WRNQ14191 1432 aaPredicted RBP eCLIP30.99■■■□□ 2.55
ARFGAP1-213ENST00000520022 CYB5RLQ6IPT4 315 aa30.98■■■□□ 2.55
ARFGAP1-213ENST00000520022 SYNJ1O43426 1573 aa30.94■■■□□ 2.54
ARFGAP1-213ENST00000520022 TOP2BQ02880 1626 aa30.93■■■□□ 2.54
ARFGAP1-213ENST00000520022 SYNJ2O15056 1496 aa30.93■■■□□ 2.54
ARFGAP1-213ENST00000520022 PBRM1Q86U86 1689 aa30.93■■■□□ 2.54
ARFGAP1-213ENST00000520022 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
ARFGAP1-213ENST00000520022 BIVM-ERCC5R4GMW8 1640 aa30.91■■■□□ 2.54
ARFGAP1-213ENST00000520022 CLASP1Q7Z460 1538 aa30.83■■■□□ 2.53
ARFGAP1-213ENST00000520022 ARAP1Q96P48 1450 aa30.82■■■□□ 2.52
ARFGAP1-213ENST00000520022 GRIN2AQ12879 1464 aa30.67■■■□□ 2.5
ARFGAP1-213ENST00000520022 ADAMTS12P58397 1594 aa30.66■■■□□ 2.5
ARFGAP1-213ENST00000520022 FHAD1B1AJZ9 1412 aa30.63■■■□□ 2.49
ARFGAP1-213ENST00000520022 ERICH3Q5RHP9 1530 aa30.6■■■□□ 2.49
ARFGAP1-213ENST00000520022 CEP170Q5SW79 1584 aa30.55■■■□□ 2.48
ARFGAP1-213ENST00000520022 TRHP20396 242 aaPredicted RBP30.55■■■□□ 2.48
ARFGAP1-213ENST00000520022 NUP160Q12769 1436 aa30.54■■■□□ 2.48
ARFGAP1-213ENST00000520022 ERCC6L2Q5T890 1561 aa30.45■■■□□ 2.47
ARFGAP1-213ENST00000520022 IGF1RP08069 1367 aa30.38■■■□□ 2.45
ARFGAP1-213ENST00000520022 KIF27Q86VH2 1401 aa30.38■■■□□ 2.45
ARFGAP1-213ENST00000520022 JPH4Q96JJ6 628 aa30.34■■■□□ 2.45
ARFGAP1-213ENST00000520022 SHROOM2Q13796 1616 aa30.33■■■□□ 2.45
ARFGAP1-213ENST00000520022 PRG4Q92954 1404 aaPredicted RBP30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms