RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 AKNAQ7Z591 1439 aa12.13□□□□□ -0.47
CLK4-203ENST00000519583 ARHGAP5Q13017 1502 aa12.13□□□□□ -0.47
CLK4-203ENST00000519583 CCNB3Q8WWL7 1395 aa12.12□□□□□ -0.47
CLK4-203ENST00000519583 CFAP74Q9C0B2 1584 aa12.11□□□□□ -0.47
CLK4-203ENST00000519583 ARAP3Q8WWN8 1544 aa12.1□□□□□ -0.47
CLK4-203ENST00000519583 RAPGEF3O95398 923 aa12.1□□□□□ -0.47
CLK4-203ENST00000519583 ZNF777Q9ULD5 760 aaPredicted RBP12.1□□□□□ -0.47
CLK4-203ENST00000519583 GPATCH8Q9UKJ3 1502 aaKnown RBP12.1□□□□□ -0.47
CLK4-203ENST00000519583 NCOA2Q15596 1464 aa12.1□□□□□ -0.47
CLK4-203ENST00000519583 SUPT6HQ7KZ85 1726 aaKnown RBP12.1□□□□□ -0.47
CLK4-203ENST00000519583 PREX2Q70Z35 1606 aa12.09□□□□□ -0.47
CLK4-203ENST00000519583 CFDP1Q9UEE9 299 aaPredicted RBP12.09□□□□□ -0.47
CLK4-203ENST00000519583 ADGRL1O94910 1474 aa12.09□□□□□ -0.47
CLK4-203ENST00000519583 CDC42BPAQ5VT25 1732 aa12.09□□□□□ -0.47
CLK4-203ENST00000519583 CDC42BPBQ9Y5S2 1711 aa12.09□□□□□ -0.47
CLK4-203ENST00000519583 SCAPERQ9BY12 1400 aa12.08□□□□□ -0.48
CLK4-203ENST00000519583 DENND4BO75064 1496 aaPredicted RBP12.08□□□□□ -0.48
CLK4-203ENST00000519583 ITSN2Q9NZM3 1697 aa12.04□□□□□ -0.48
CLK4-203ENST00000519583 FRMPD1Q5SYB0 1578 aa12.03□□□□□ -0.48
CLK4-203ENST00000519583 POGZQ7Z3K3 1410 aa12.03□□□□□ -0.48
CLK4-203ENST00000519583 ZEB1P37275 1124 aaPredicted RBP12.03□□□□□ -0.48
CLK4-203ENST00000519583 ZNF644Q9H582 1327 aaPredicted RBP12.03□□□□□ -0.48
CLK4-203ENST00000519583 AFAP1Q8N556 730 aa12.03□□□□□ -0.48
CLK4-203ENST00000519583 SAMD9LQ8IVG5 1584 aa12.03□□□□□ -0.48
CLK4-203ENST00000519583 ABCC1P33527 1531 aa12.02□□□□□ -0.48
CLK4-203ENST00000519583 RICTORQ6R327 1708 aa12.02□□□□□ -0.48
CLK4-203ENST00000519583 HNRNPMP52272 730 aaKnown RBP eCLIP12.02□□□□□ -0.49
CLK4-203ENST00000519583 MYT1LQ9UL68 1186 aa12.02□□□□□ -0.49
CLK4-203ENST00000519583 ARHGEF12Q9NZN5 1544 aa12.02□□□□□ -0.49
CLK4-203ENST00000519583 MYOM3Q5VTT5 1437 aa12.01□□□□□ -0.49
CLK4-203ENST00000519583 TRAPPC8Q9Y2L5 1435 aa12.01□□□□□ -0.49
CLK4-203ENST00000519583 PLEKHH2Q8IVE3 1493 aa12□□□□□ -0.49
CLK4-203ENST00000519583 SYCP2Q9BX26 1530 aa12□□□□□ -0.49
CLK4-203ENST00000519583 ZNF518AQ6AHZ1 1483 aa12□□□□□ -0.49
CLK4-203ENST00000519583 CCER1Q8TC90 406 aaPredicted RBP11.99□□□□□ -0.49
CLK4-203ENST00000519583 KIAA1107Q9UPP5 1409 aa11.99□□□□□ -0.49
CLK4-203ENST00000519583 CAMSAP2Q08AD1 1489 aa11.98□□□□□ -0.49
CLK4-203ENST00000519583 ZMYM4Q5VZL5 1548 aa11.98□□□□□ -0.49
CLK4-203ENST00000519583 MIA2Q96PC5 1412 aa11.97□□□□□ -0.49
CLK4-203ENST00000519583 YEATS2Q9ULM3 1422 aa11.97□□□□□ -0.49
CLK4-203ENST00000519583 ZFYVE16Q7Z3T8 1539 aa11.96□□□□□ -0.49
CLK4-203ENST00000519583 MAGI2Q86UL8 1455 aa11.96□□□□□ -0.49
CLK4-203ENST00000519583 KDM5CP41229 1560 aa11.96□□□□□ -0.49
CLK4-203ENST00000519583 RRBP1Q9P2E9 1410 aaKnown RBP11.96□□□□□ -0.5
CLK4-203ENST00000519583 SPAG9O60271 1321 aaKnown RBP11.95□□□□□ -0.5
CLK4-203ENST00000519583 ARHGEF40Q8TER5 1519 aa11.95□□□□□ -0.5
CLK4-203ENST00000519583 MBD5Q9P267 1494 aa11.95□□□□□ -0.5
CLK4-203ENST00000519583 FGD6Q6ZV73 1430 aa11.95□□□□□ -0.5
CLK4-203ENST00000519583 HECW2Q9P2P5 1572 aa11.94□□□□□ -0.5
CLK4-203ENST00000519583 ARID4BQ4LE39 1312 aaPredicted RBP11.94□□□□□ -0.5
CLK4-203ENST00000519583 MLH3Q9UHC1 1453 aa11.93□□□□□ -0.5
CLK4-203ENST00000519583 RSPH4AQ5TD94 716 aa11.93□□□□□ -0.5
CLK4-203ENST00000519583 PTPN23Q9H3S7 1636 aa11.92□□□□□ -0.5
CLK4-203ENST00000519583 CCDC141Q6ZP82 1450 aa11.92□□□□□ -0.5
CLK4-203ENST00000519583 FAM50AQ14320 339 aaKnown RBP11.92□□□□□ -0.5
CLK4-203ENST00000519583 ATP10AO60312 1499 aa11.92□□□□□ -0.5
CLK4-203ENST00000519583 TSPY4P0CV99 314 aa11.91□□□□□ -0.5
CLK4-203ENST00000519583 TSPY10P0CW01 314 aa11.91□□□□□ -0.5
CLK4-203ENST00000519583 KIDINS220Q9ULH0 1771 aa11.9□□□□□ -0.5
CLK4-203ENST00000519583 ARHGEF5Q12774 1597 aa11.9□□□□□ -0.5
CLK4-203ENST00000519583 ATP7AQ04656 1500 aa11.9□□□□□ -0.5
CLK4-203ENST00000519583 C9orf84Q5VXU9 1444 aa11.9□□□□□ -0.5
CLK4-203ENST00000519583 DIP2CQ9Y2E4 1556 aa11.9□□□□□ -0.51
CLK4-203ENST00000519583 ABCA6Q8N139 1617 aa11.9□□□□□ -0.51
CLK4-203ENST00000519583 TCOF1Q13428 1488 aaKnown RBP11.89□□□□□ -0.51
CLK4-203ENST00000519583 KDM4FA0A1W2PPD8 638 aa11.88□□□□□ -0.51
CLK4-203ENST00000519583 MLECQ14165 292 aa11.88□□□□□ -0.51
CLK4-203ENST00000519583 INO80Q9ULG1 1556 aaPredicted RBP11.88□□□□□ -0.51
CLK4-203ENST00000519583 RTEL1-TNFRSF6BF6WH68 1400 aa11.87□□□□□ -0.51
CLK4-203ENST00000519583 ABCC5O15440 1437 aa11.86□□□□□ -0.51
CLK4-203ENST00000519583 ITGAEP38570 1179 aa11.86□□□□□ -0.51
CLK4-203ENST00000519583 SIGLEC1Q9BZZ2 1709 aa11.86□□□□□ -0.51
CLK4-203ENST00000519583 DAPK1P53355 1430 aa11.85□□□□□ -0.51
CLK4-203ENST00000519583 CHIC2Q9UKJ5 165 aa11.85□□□□□ -0.51
CLK4-203ENST00000519583 A2MP01023 1474 aa11.85□□□□□ -0.51
CLK4-203ENST00000519583 DNMT1P26358 1616 aaKnown RBP11.84□□□□□ -0.51
CLK4-203ENST00000519583 AEBP2Q6ZN18 517 aaPredicted RBP11.84□□□□□ -0.51
CLK4-203ENST00000519583 REREQ9P2R6 1566 aa11.84□□□□□ -0.51
CLK4-203ENST00000519583 MAST1Q9Y2H9 1570 aa11.83□□□□□ -0.52
CLK4-203ENST00000519583 BCORL1Q5H9F3 1711 aa11.83□□□□□ -0.52
CLK4-203ENST00000519583 SHANK2Q9UPX8 1470 aa11.82□□□□□ -0.52
CLK4-203ENST00000519583 ADGBQ8N7X0 1667 aa11.82□□□□□ -0.52
CLK4-203ENST00000519583 CROCC2H7BZ55 1655 aa11.81□□□□□ -0.52
CLK4-203ENST00000519583 AGLP35573 1532 aa11.81□□□□□ -0.52
CLK4-203ENST00000519583 DHX29Q7Z478 1369 aaKnown RBP11.81□□□□□ -0.52
CLK4-203ENST00000519583 RRP7BPQ9NSQ0 103 aa11.81□□□□□ -0.52
CLK4-203ENST00000519583 PLXNC1O60486 1568 aa11.8□□□□□ -0.52
CLK4-203ENST00000519583 ADAMTSL3P82987 1691 aa11.8□□□□□ -0.52
CLK4-203ENST00000519583 GGT6Q6P531 493 aa11.8□□□□□ -0.52
CLK4-203ENST00000519583 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLK4-203ENST00000519583 KIF15Q9NS87 1388 aa11.8□□□□□ -0.52
CLK4-203ENST00000519583 KIF3BO15066 747 aa11.79□□□□□ -0.52
CLK4-203ENST00000519583 ANKRD30AQ9BXX3 1397 aa11.79□□□□□ -0.52
CLK4-203ENST00000519583 MADDQ8WXG6 1647 aa11.79□□□□□ -0.52
CLK4-203ENST00000519583 PLPPR3Q6T4P5 718 aa11.79□□□□□ -0.52
CLK4-203ENST00000519583 PTPRKQ15262 1439 aa11.78□□□□□ -0.52
CLK4-203ENST00000519583 ESF1Q9H501 851 aaKnown RBP11.78□□□□□ -0.52
CLK4-203ENST00000519583 NCOA1Q15788 1441 aa11.77□□□□□ -0.53
CLK4-203ENST00000519583 DUOX2Q9NRD8 1548 aa11.76□□□□□ -0.53
CLK4-203ENST00000519583 RIMS1Q86UR5 1692 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms