RNA–Protein interactions for RNA: ENST00000517386.1

HMBOX1-204, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-204ENST00000517386 ATP1B4Q9UN42 357 aaPredicted RBP13.12□□□□□ -0.31
HMBOX1-204ENST00000517386 PLEKHD1A6NEE1 506 aa13.11□□□□□ -0.31
HMBOX1-204ENST00000517386 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
HMBOX1-204ENST00000517386 PTPRMP28827 1452 aa13.09□□□□□ -0.31
HMBOX1-204ENST00000517386 NEO1Q92859 1461 aa13.09□□□□□ -0.31
HMBOX1-204ENST00000517386 FRMPD1Q5SYB0 1578 aa13.08□□□□□ -0.32
HMBOX1-204ENST00000517386 PHLDB1Q86UU1 1377 aa13.07□□□□□ -0.32
HMBOX1-204ENST00000517386 EEA1Q15075 1411 aa13.07□□□□□ -0.32
HMBOX1-204ENST00000517386 UBTFP17480 764 aaKnown RBP13.07□□□□□ -0.32
HMBOX1-204ENST00000517386 CDK13Q14004 1512 aaKnown RBP13.07□□□□□ -0.32
HMBOX1-204ENST00000517386 MLECQ14165 292 aa13.06□□□□□ -0.32
HMBOX1-204ENST00000517386 AKNAQ7Z591 1439 aa13.05□□□□□ -0.32
HMBOX1-204ENST00000517386 ADAMTSL3P82987 1691 aa13.05□□□□□ -0.32
HMBOX1-204ENST00000517386 FANCAO15360 1455 aa13.04□□□□□ -0.32
HMBOX1-204ENST00000517386 DENND4BO75064 1496 aaPredicted RBP13.04□□□□□ -0.32
HMBOX1-204ENST00000517386 TTC37Q6PGP7 1564 aa13.04□□□□□ -0.32
HMBOX1-204ENST00000517386 MADDQ8WXG6 1647 aa13.04□□□□□ -0.32
HMBOX1-204ENST00000517386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.03□□□□□ -0.32
HMBOX1-204ENST00000517386 BCORL1Q5H9F3 1711 aa13.02□□□□□ -0.32
HMBOX1-204ENST00000517386 HSPA2P54652 639 aa13.02□□□□□ -0.33
HMBOX1-204ENST00000517386 YEATS2Q9ULM3 1422 aa13.02□□□□□ -0.33
HMBOX1-204ENST00000517386 RIMS1Q86UR5 1692 aaKnown RBP13□□□□□ -0.33
HMBOX1-204ENST00000517386 EFCAB5A4FU69 1503 aa13□□□□□ -0.33
HMBOX1-204ENST00000517386 ARHGEF40Q8TER5 1519 aa13□□□□□ -0.33
HMBOX1-204ENST00000517386 RICTORQ6R327 1708 aa12.99□□□□□ -0.33
HMBOX1-204ENST00000517386 SCAPERQ9BY12 1400 aa12.97□□□□□ -0.33
HMBOX1-204ENST00000517386 SIGLEC1Q9BZZ2 1709 aa12.97□□□□□ -0.33
HMBOX1-204ENST00000517386 ZFYVE16Q7Z3T8 1539 aa12.97□□□□□ -0.33
HMBOX1-204ENST00000517386 PCF11O94913 1555 aaKnown RBP12.96□□□□□ -0.33
HMBOX1-204ENST00000517386 LMTK3Q96Q04 1460 aa12.96□□□□□ -0.34
HMBOX1-204ENST00000517386 FBXO41Q8TF61 875 aa12.95□□□□□ -0.34
HMBOX1-204ENST00000517386 MYT1LQ9UL68 1186 aa12.95□□□□□ -0.34
HMBOX1-204ENST00000517386 ARHGAP35Q9NRY4 1499 aa12.95□□□□□ -0.34
HMBOX1-204ENST00000517386 PLCH2O75038 1416 aa12.95□□□□□ -0.34
HMBOX1-204ENST00000517386 HECW1Q76N89 1606 aa12.95□□□□□ -0.34
HMBOX1-204ENST00000517386 CFAP74Q9C0B2 1584 aa12.94□□□□□ -0.34
HMBOX1-204ENST00000517386 HAX1O00165 279 aa12.93□□□□□ -0.34
HMBOX1-204ENST00000517386 CEBPAP49715 358 aaPredicted RBP12.93□□□□□ -0.34
HMBOX1-204ENST00000517386 EFCAB2Q5VUJ9 269 aa12.93□□□□□ -0.34
HMBOX1-204ENST00000517386 POGZQ7Z3K3 1410 aa12.93□□□□□ -0.34
HMBOX1-204ENST00000517386 KIF14Q15058 1648 aa12.92□□□□□ -0.34
HMBOX1-204ENST00000517386 APLP2Q06481 763 aa12.92□□□□□ -0.34
HMBOX1-204ENST00000517386 FMN1Q68DA7 1419 aa12.92□□□□□ -0.34
HMBOX1-204ENST00000517386 AFAP1Q8N556 730 aa12.92□□□□□ -0.34
HMBOX1-204ENST00000517386 ZMYM4Q5VZL5 1548 aa12.92□□□□□ -0.34
HMBOX1-204ENST00000517386 CDK11AQ9UQ88 783 aaPredicted RBP12.91□□□□□ -0.34
HMBOX1-204ENST00000517386 ARHGAP5Q13017 1502 aa12.88□□□□□ -0.35
HMBOX1-204ENST00000517386 ATP10AO60312 1499 aa12.88□□□□□ -0.35
HMBOX1-204ENST00000517386 MAGI2Q86UL8 1455 aa12.88□□□□□ -0.35
HMBOX1-204ENST00000517386 MYO5CQ9NQX4 1742 aa12.88□□□□□ -0.35
HMBOX1-204ENST00000517386 TROQ12816 1431 aaPredicted RBP12.88□□□□□ -0.35
HMBOX1-204ENST00000517386 FER1L4A9Z1Z3 1794 aa12.86□□□□□ -0.35
HMBOX1-204ENST00000517386 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
HMBOX1-204ENST00000517386 C9orf84Q5VXU9 1444 aa12.86□□□□□ -0.35
HMBOX1-204ENST00000517386 LRRIQ1Q96JM4 1722 aa12.85□□□□□ -0.35
HMBOX1-204ENST00000517386 CLIP1P30622 1438 aa12.85□□□□□ -0.35
HMBOX1-204ENST00000517386 SLC4A2P04920 1241 aa12.84□□□□□ -0.35
HMBOX1-204ENST00000517386 ZNF777Q9ULD5 760 aaPredicted RBP12.84□□□□□ -0.35
HMBOX1-204ENST00000517386 ZNF518AQ6AHZ1 1483 aa12.83□□□□□ -0.36
HMBOX1-204ENST00000517386 ARHGEF12Q9NZN5 1544 aa12.83□□□□□ -0.36
HMBOX1-204ENST00000517386 TRAPPC8Q9Y2L5 1435 aa12.82□□□□□ -0.36
HMBOX1-204ENST00000517386 CERKQ8TCT0 537 aa12.81□□□□□ -0.36
HMBOX1-204ENST00000517386 CDC42BPBQ9Y5S2 1711 aa12.79□□□□□ -0.36
HMBOX1-204ENST00000517386 DIP2CQ9Y2E4 1556 aa12.79□□□□□ -0.36
HMBOX1-204ENST00000517386 CASKIN1Q8WXD9 1431 aa12.79□□□□□ -0.36
HMBOX1-204ENST00000517386 KDM5CP41229 1560 aa12.78□□□□□ -0.36
HMBOX1-204ENST00000517386 ABCA6Q8N139 1617 aa12.78□□□□□ -0.36
HMBOX1-204ENST00000517386 ESF1Q9H501 851 aaKnown RBP12.78□□□□□ -0.36
HMBOX1-204ENST00000517386 HNRNPMP52272 730 aaKnown RBP eCLIP12.77□□□□□ -0.37
HMBOX1-204ENST00000517386 EVX2Q03828 476 aa12.77□□□□□ -0.37
HMBOX1-204ENST00000517386 ABCC1P33527 1531 aa12.76□□□□□ -0.37
HMBOX1-204ENST00000517386 CCDC18Q5T9S5 1454 aa12.75□□□□□ -0.37
HMBOX1-204ENST00000517386 UHRF1BP1Q6BDS2 1440 aa12.75□□□□□ -0.37
HMBOX1-204ENST00000517386 PREX2Q70Z35 1606 aa12.75□□□□□ -0.37
HMBOX1-204ENST00000517386 PREX1Q8TCU6 1659 aa12.75□□□□□ -0.37
HMBOX1-204ENST00000517386 PLSCR2Q9NRY7 297 aa12.75□□□□□ -0.37
HMBOX1-204ENST00000517386 MLH3Q9UHC1 1453 aa12.74□□□□□ -0.37
HMBOX1-204ENST00000517386 ITSN2Q9NZM3 1697 aa12.73□□□□□ -0.37
HMBOX1-204ENST00000517386 SPAG9O60271 1321 aaKnown RBP12.72□□□□□ -0.37
HMBOX1-204ENST00000517386 CDC42BPAQ5VT25 1732 aa12.72□□□□□ -0.37
HMBOX1-204ENST00000517386 SYCP2Q9BX26 1530 aa12.72□□□□□ -0.37
HMBOX1-204ENST00000517386 FYCO1Q9BQS8 1478 aa12.72□□□□□ -0.37
HMBOX1-204ENST00000517386 STRCQ7RTU9 1775 aa12.71□□□□□ -0.37
HMBOX1-204ENST00000517386 C3P01024 1663 aa12.71□□□□□ -0.37
HMBOX1-204ENST00000517386 KIDINS220Q9ULH0 1771 aa12.71□□□□□ -0.38
HMBOX1-204ENST00000517386 SAMD9LQ8IVG5 1584 aa12.7□□□□□ -0.38
HMBOX1-204ENST00000517386 KCNA4P22459 653 aa12.7□□□□□ -0.38
HMBOX1-204ENST00000517386 CFDP1Q9UEE9 299 aaPredicted RBP12.7□□□□□ -0.38
HMBOX1-204ENST00000517386 GPATCH8Q9UKJ3 1502 aaKnown RBP12.7□□□□□ -0.38
HMBOX1-204ENST00000517386 ZNF644Q9H582 1327 aaPredicted RBP12.69□□□□□ -0.38
HMBOX1-204ENST00000517386 POLA2Q14181 598 aa12.69□□□□□ -0.38
HMBOX1-204ENST00000517386 REREQ9P2R6 1566 aa12.69□□□□□ -0.38
HMBOX1-204ENST00000517386 CCNB3Q8WWL7 1395 aa12.69□□□□□ -0.38
HMBOX1-204ENST00000517386 GGT6Q6P531 493 aa12.68□□□□□ -0.38
HMBOX1-204ENST00000517386 AKT1S1Q96B36 256 aa12.68□□□□□ -0.38
HMBOX1-204ENST00000517386 AGLP35573 1532 aa12.67□□□□□ -0.38
HMBOX1-204ENST00000517386 SUPT6HQ7KZ85 1726 aaKnown RBP12.67□□□□□ -0.38
HMBOX1-204ENST00000517386 MTUS2Q5JR59 1369 aa12.67□□□□□ -0.38
HMBOX1-204ENST00000517386 NCKAP5LQ9HCH0 1330 aa12.66□□□□□ -0.38
HMBOX1-204ENST00000517386 SETD1BQ9UPS6 1966 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms