RNA–Protein interactions for RNA: ENST00000516546.1

RN7SKP287-201, Transcript of RNA, 7SK small nuclear pseudogene 287, humanhuman

BASIC

Gene RN7SKP287, Length 266 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP287-201ENST00000516546 C2orf72A6NCS6 295 aa13.34□□□□□ -0.27
RN7SKP287-201ENST00000516546 TMC2Q8TDI7 906 aa13.33□□□□□ -0.28
RN7SKP287-201ENST00000516546 ST18O60284 1047 aa13.32□□□□□ -0.28
RN7SKP287-201ENST00000516546 HOXB3P14651 431 aaPredicted RBP13.31□□□□□ -0.28
RN7SKP287-201ENST00000516546 SPRYD3Q8NCJ5 442 aa13.3□□□□□ -0.28
RN7SKP287-201ENST00000516546 DOK7Q18PE1 504 aa13.27□□□□□ -0.29
RN7SKP287-201ENST00000516546 PAXIP1Q6ZW49 1069 aaPredicted RBP13.26□□□□□ -0.29
RN7SKP287-201ENST00000516546 GPHNQ9NQX3 736 aaPredicted RBP13.26□□□□□ -0.29
RN7SKP287-201ENST00000516546 CFAP44Q96MT7 982 aa13.24□□□□□ -0.29
RN7SKP287-201ENST00000516546 ZNF710Q8N1W2 664 aa13.23□□□□□ -0.29
RN7SKP287-201ENST00000516546 POTEMA6NI47 508 aa13.22□□□□□ -0.29
RN7SKP287-201ENST00000516546 POTEGQ6S5H5 508 aa13.22□□□□□ -0.29
RN7SKP287-201ENST00000516546 CRISPLD2Q9H0B8 497 aa13.22□□□□□ -0.29
RN7SKP287-201ENST00000516546 NCKAP5LQ9HCH0 1330 aa13.21□□□□□ -0.29
RN7SKP287-201ENST00000516546 RIMBP2O15034 1052 aa13.2□□□□□ -0.3
RN7SKP287-201ENST00000516546 FOXK1P85037 733 aa13.2□□□□□ -0.3
RN7SKP287-201ENST00000516546 DSG2Q14126 1118 aa13.19□□□□□ -0.3
RN7SKP287-201ENST00000516546 CADPS2Q86UW7 1296 aa13.19□□□□□ -0.3
RN7SKP287-201ENST00000516546 PDE4AP27815 886 aa13.17□□□□□ -0.3
RN7SKP287-201ENST00000516546 MARVELD3Q96A59 401 aa13.17□□□□□ -0.3
RN7SKP287-201ENST00000516546 ZSWIM6Q9HCJ5 1215 aa13.17□□□□□ -0.3
RN7SKP287-201ENST00000516546 PLPP6Q8IY26 295 aa13.16□□□□□ -0.3
RN7SKP287-201ENST00000516546 HOXB1P14653 301 aaPredicted RBP13.15□□□□□ -0.3
RN7SKP287-201ENST00000516546 SLC34A2O95436 690 aa13.13□□□□□ -0.31
RN7SKP287-201ENST00000516546 GPR153Q6NV75 609 aa13.13□□□□□ -0.31
RN7SKP287-201ENST00000516546 LARP6Q9BRS8 491 aaKnown RBP13.13□□□□□ -0.31
RN7SKP287-201ENST00000516546 EMP3P54852 163 aa13.12□□□□□ -0.31
RN7SKP287-201ENST00000516546 PPP1R15BQ5SWA1 713 aa13.12□□□□□ -0.31
RN7SKP287-201ENST00000516546 ARSIQ5FYB1 569 aa13.1□□□□□ -0.31
RN7SKP287-201ENST00000516546 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
RN7SKP287-201ENST00000516546 MFSD10Q14728 455 aa13.08□□□□□ -0.32
RN7SKP287-201ENST00000516546 PCDHGA4Q9Y5G9 962 aa13.07□□□□□ -0.32
RN7SKP287-201ENST00000516546 PTCD2Q8WV60 388 aaKnown RBP13.06□□□□□ -0.32
RN7SKP287-201ENST00000516546 KHSRPQ92945 711 aaKnown RBP eCLIP13.06□□□□□ -0.32
RN7SKP287-201ENST00000516546 FAM205CA6NFA0 338 aa13.03□□□□□ -0.32
RN7SKP287-201ENST00000516546 ERBB3P21860 1342 aa13□□□□□ -0.33
RN7SKP287-201ENST00000516546 NUDT7P0C024 238 aa13□□□□□ -0.33
RN7SKP287-201ENST00000516546 HS3ST6Q96QI5 342 aa13□□□□□ -0.33
RN7SKP287-201ENST00000516546 POTEB3A0JP26 581 aa12.99□□□□□ -0.33
RN7SKP287-201ENST00000516546 POTEBQ6S5H4 581 aa12.99□□□□□ -0.33
RN7SKP287-201ENST00000516546 OXER1Q8TDS5 423 aa12.99□□□□□ -0.33
RN7SKP287-201ENST00000516546 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
RN7SKP287-201ENST00000516546 TBC1D12O60347 775 aa12.98□□□□□ -0.33
RN7SKP287-201ENST00000516546 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
RN7SKP287-201ENST00000516546 CDAN1Q8IWY9 1227 aa12.98□□□□□ -0.33
RN7SKP287-201ENST00000516546 UPF1Q92900 1129 aaKnown RBP eCLIP12.98□□□□□ -0.33
RN7SKP287-201ENST00000516546 TSHZ2Q9NRE2 1034 aa12.98□□□□□ -0.33
RN7SKP287-201ENST00000516546 KDM4FA0A1W2PPD8 638 aa12.95□□□□□ -0.34
RN7SKP287-201ENST00000516546 ZNF316A6NFI3 1004 aaPredicted RBP12.95□□□□□ -0.34
RN7SKP287-201ENST00000516546 VARS2Q5ST30 1063 aaKnown RBP12.95□□□□□ -0.34
RN7SKP287-201ENST00000516546 EMILIN3Q9NT22 766 aa12.93□□□□□ -0.34
RN7SKP287-201ENST00000516546 CAMK2BQ13554 666 aa12.92□□□□□ -0.34
RN7SKP287-201ENST00000516546 LHX6Q9UPM6 363 aa12.92□□□□□ -0.34
RN7SKP287-201ENST00000516546 WDR70Q9NW82 654 aa12.88□□□□□ -0.35
RN7SKP287-201ENST00000516546 MAP3K9P80192 1104 aa12.87□□□□□ -0.35
RN7SKP287-201ENST00000516546 ZNF687Q8N1G0 1237 aa12.85□□□□□ -0.35
RN7SKP287-201ENST00000516546 EVI5O60447 810 aa12.83□□□□□ -0.36
RN7SKP287-201ENST00000516546 E2F4Q16254 413 aa12.83□□□□□ -0.36
RN7SKP287-201ENST00000516546 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
RN7SKP287-201ENST00000516546 KRTAP3-3Q9BYR6 98 aa12.82□□□□□ -0.36
RN7SKP287-201ENST00000516546 KRTAP3-2Q9BYR7 98 aa12.82□□□□□ -0.36
RN7SKP287-201ENST00000516546 DPYSL4O14531 572 aa12.81□□□□□ -0.36
RN7SKP287-201ENST00000516546 ANO8Q9HCE9 1232 aaPredicted RBP12.81□□□□□ -0.36
RN7SKP287-201ENST00000516546 HAP1P54257 671 aaPredicted RBP12.78□□□□□ -0.36
RN7SKP287-201ENST00000516546 PPP4R3BQ5MIZ7 849 aa12.75□□□□□ -0.37
RN7SKP287-201ENST00000516546 ZNF454Q8N9F8 522 aa12.74□□□□□ -0.37
RN7SKP287-201ENST00000516546 ARIH1Q9Y4X5 557 aaPredicted RBP12.73□□□□□ -0.37
RN7SKP287-201ENST00000516546 PBX2P40425 430 aa12.72□□□□□ -0.37
RN7SKP287-201ENST00000516546 FOSBP53539 338 aa12.72□□□□□ -0.37
RN7SKP287-201ENST00000516546 POTEEQ6S8J3 1075 aa12.72□□□□□ -0.37
RN7SKP287-201ENST00000516546 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
RN7SKP287-201ENST00000516546 PDIA6Q15084 440 aa12.71□□□□□ -0.37
RN7SKP287-201ENST00000516546 AXIN2Q9Y2T1 843 aa12.69□□□□□ -0.38
RN7SKP287-201ENST00000516546 SPDYE16A6NNV3 312 aaPredicted RBP12.68□□□□□ -0.38
RN7SKP287-201ENST00000516546 PLSCR2Q9NRY7 297 aa12.68□□□□□ -0.38
RN7SKP287-201ENST00000516546 ARHGAP33O14559 1287 aa12.67□□□□□ -0.38
RN7SKP287-201ENST00000516546 KCNV2Q8TDN2 545 aa12.67□□□□□ -0.38
RN7SKP287-201ENST00000516546 LSM11P83369 360 aaKnown RBP eCLIP12.66□□□□□ -0.38
RN7SKP287-201ENST00000516546 PCDHGA10Q9Y5H3 936 aa12.66□□□□□ -0.38
RN7SKP287-201ENST00000516546 SPNS2Q8IVW8 549 aa12.65□□□□□ -0.38
RN7SKP287-201ENST00000516546 ZDHHC16Q969W1 377 aa12.65□□□□□ -0.38
RN7SKP287-201ENST00000516546 PTGER2P43116 358 aa12.64□□□□□ -0.39
RN7SKP287-201ENST00000516546 BCL2L12Q9HB09 334 aa12.64□□□□□ -0.39
RN7SKP287-201ENST00000516546 PHF14O94880 888 aa12.63□□□□□ -0.39
RN7SKP287-201ENST00000516546 ANKRD13DQ6ZTN6 518 aa12.63□□□□□ -0.39
RN7SKP287-201ENST00000516546 ARHGEF1Q92888 912 aaKnown RBP12.63□□□□□ -0.39
RN7SKP287-201ENST00000516546 KCNK17Q96T54 332 aa12.63□□□□□ -0.39
RN7SKP287-201ENST00000516546 PSEN2P49810 448 aa12.62□□□□□ -0.39
RN7SKP287-201ENST00000516546 DDX12PQ92771 950 aa12.62□□□□□ -0.39
RN7SKP287-201ENST00000516546 ADAM33Q9BZ11 813 aa12.62□□□□□ -0.39
RN7SKP287-201ENST00000516546 KDM2AQ9Y2K7 1162 aa12.62□□□□□ -0.39
RN7SKP287-201ENST00000516546 TYW1BQ6NUM6 668 aa12.61□□□□□ -0.39
RN7SKP287-201ENST00000516546 P3H3Q8IVL6 736 aa12.61□□□□□ -0.39
RN7SKP287-201ENST00000516546 FBXW7Q969H0 707 aa12.6□□□□□ -0.39
RN7SKP287-201ENST00000516546 KCNH8Q96L42 1107 aa12.6□□□□□ -0.39
RN7SKP287-201ENST00000516546 DMRTA1Q5VZB9 504 aa12.59□□□□□ -0.39
RN7SKP287-201ENST00000516546 EPAS1Q99814 870 aa12.59□□□□□ -0.39
RN7SKP287-201ENST00000516546 PTPREP23469 700 aa12.58□□□□□ -0.4
RN7SKP287-201ENST00000516546 VSIG10Q8N0Z9 540 aa12.57□□□□□ -0.4
RN7SKP287-201ENST00000516546 NBR1Q14596 966 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms