RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 C2orf72A6NCS6 295 aa8.93□□□□□ -0.98
SNORA40.12-201ENST00000516329 TMC2Q8TDI7 906 aa8.93□□□□□ -0.98
SNORA40.12-201ENST00000516329 KIF3CO14782 793 aa8.9□□□□□ -0.98
SNORA40.12-201ENST00000516329 SNPHO15079 494 aa8.9□□□□□ -0.98
SNORA40.12-201ENST00000516329 LCE2DQ5TA82 110 aaPredicted RBP8.88□□□□□ -0.99
SNORA40.12-201ENST00000516329 ST18O60284 1047 aa8.87□□□□□ -0.99
SNORA40.12-201ENST00000516329 HOXB3P14651 431 aaPredicted RBP8.87□□□□□ -0.99
SNORA40.12-201ENST00000516329 CADPS2Q86UW7 1296 aa8.87□□□□□ -0.99
SNORA40.12-201ENST00000516329 NCKAP5LQ9HCH0 1330 aa8.85□□□□□ -0.99
SNORA40.12-201ENST00000516329 DOK7Q18PE1 504 aa8.85□□□□□ -0.99
SNORA40.12-201ENST00000516329 ZNF710Q8N1W2 664 aa8.85□□□□□ -0.99
SNORA40.12-201ENST00000516329 CRISPLD2Q9H0B8 497 aa8.84□□□□□ -0.99
SNORA40.12-201ENST00000516329 GPHNQ9NQX3 736 aaPredicted RBP8.84□□□□□ -0.99
SNORA40.12-201ENST00000516329 DSG2Q14126 1118 aa8.83□□□□□ -1
SNORA40.12-201ENST00000516329 RIMBP2O15034 1052 aa8.82□□□□□ -1
SNORA40.12-201ENST00000516329 PDE4AP27815 886 aa8.81□□□□□ -1
SNORA40.12-201ENST00000516329 FOXK1P85037 733 aa8.81□□□□□ -1
SNORA40.12-201ENST00000516329 PLPP6Q8IY26 295 aa8.81□□□□□ -1
SNORA40.12-201ENST00000516329 MARVELD3Q96A59 401 aa8.81□□□□□ -1
SNORA40.12-201ENST00000516329 LARP6Q9BRS8 491 aaKnown RBP8.81□□□□□ -1
SNORA40.12-201ENST00000516329 POTEMA6NI47 508 aa8.8□□□□□ -1
SNORA40.12-201ENST00000516329 PPP1R15BQ5SWA1 713 aa8.8□□□□□ -1
SNORA40.12-201ENST00000516329 POTEGQ6S5H5 508 aa8.8□□□□□ -1
SNORA40.12-201ENST00000516329 DDX27Q96GQ7 796 aaKnown RBP8.78□□□□□ -1
SNORA40.12-201ENST00000516329 EMP3P54852 163 aa8.77□□□□□ -1.01
SNORA40.12-201ENST00000516329 PLCB2Q00722 1185 aa8.77□□□□□ -1.01
SNORA40.12-201ENST00000516329 KHSRPQ92945 711 aaKnown RBP eCLIP8.77□□□□□ -1.01
SNORA40.12-201ENST00000516329 TSHZ2Q9NRE2 1034 aa8.77□□□□□ -1.01
SNORA40.12-201ENST00000516329 ARSIQ5FYB1 569 aa8.76□□□□□ -1.01
SNORA40.12-201ENST00000516329 HOXB1P14653 301 aaPredicted RBP8.75□□□□□ -1.01
SNORA40.12-201ENST00000516329 ZSWIM6Q9HCJ5 1215 aa8.75□□□□□ -1.01
SNORA40.12-201ENST00000516329 MFSD10Q14728 455 aa8.74□□□□□ -1.01
SNORA40.12-201ENST00000516329 UPF1Q92900 1129 aaKnown RBP eCLIP8.74□□□□□ -1.01
SNORA40.12-201ENST00000516329 PCDHGA4Q9Y5G9 962 aa8.74□□□□□ -1.01
SNORA40.12-201ENST00000516329 SLC34A2O95436 690 aa8.73□□□□□ -1.01
SNORA40.12-201ENST00000516329 GPR153Q6NV75 609 aa8.73□□□□□ -1.01
SNORA40.12-201ENST00000516329 FAM205CA6NFA0 338 aa8.71□□□□□ -1.02
SNORA40.12-201ENST00000516329 NUDT7P0C024 238 aa8.71□□□□□ -1.02
SNORA40.12-201ENST00000516329 PTCD2Q8WV60 388 aaKnown RBP8.69□□□□□ -1.02
SNORA40.12-201ENST00000516329 HAP1P54257 671 aaPredicted RBP8.68□□□□□ -1.02
SNORA40.12-201ENST00000516329 OXER1Q8TDS5 423 aa8.68□□□□□ -1.02
SNORA40.12-201ENST00000516329 HS3ST6Q96QI5 342 aa8.68□□□□□ -1.02
SNORA40.12-201ENST00000516329 ERBB3P21860 1342 aa8.68□□□□□ -1.02
SNORA40.12-201ENST00000516329 POTEB3A0JP26 581 aa8.67□□□□□ -1.02
SNORA40.12-201ENST00000516329 POTEBQ6S5H4 581 aa8.67□□□□□ -1.02
SNORA40.12-201ENST00000516329 EMILIN3Q9NT22 766 aa8.67□□□□□ -1.02
SNORA40.12-201ENST00000516329 TBC1D12O60347 775 aa8.66□□□□□ -1.02
SNORA40.12-201ENST00000516329 VARS2Q5ST30 1063 aaKnown RBP8.66□□□□□ -1.02
SNORA40.12-201ENST00000516329 WDR70Q9NW82 654 aa8.66□□□□□ -1.02
SNORA40.12-201ENST00000516329 ZNF316A6NFI3 1004 aaPredicted RBP8.64□□□□□ -1.03
SNORA40.12-201ENST00000516329 LHX6Q9UPM6 363 aa8.64□□□□□ -1.03
SNORA40.12-201ENST00000516329 CDAN1Q8IWY9 1227 aa8.63□□□□□ -1.03
SNORA40.12-201ENST00000516329 DPYSL4O14531 572 aa8.62□□□□□ -1.03
SNORA40.12-201ENST00000516329 MAP3K9P80192 1104 aa8.62□□□□□ -1.03
SNORA40.12-201ENST00000516329 CAMK2BQ13554 666 aa8.62□□□□□ -1.03
SNORA40.12-201ENST00000516329 E2F4Q16254 413 aa8.61□□□□□ -1.03
SNORA40.12-201ENST00000516329 KDM4FA0A1W2PPD8 638 aa8.6□□□□□ -1.03
SNORA40.12-201ENST00000516329 EVI5O60447 810 aa8.6□□□□□ -1.03
SNORA40.12-201ENST00000516329 PCDH10Q9P2E7 1040 aa8.55□□□□□ -1.04
SNORA40.12-201ENST00000516329 ZNF687Q8N1G0 1237 aa8.54□□□□□ -1.04
SNORA40.12-201ENST00000516329 ZNF454Q8N9F8 522 aa8.54□□□□□ -1.04
SNORA40.12-201ENST00000516329 PSDA5PKW4 1024 aaPredicted RBP8.53□□□□□ -1.04
SNORA40.12-201ENST00000516329 PPP4R3BQ5MIZ7 849 aa8.53□□□□□ -1.04
SNORA40.12-201ENST00000516329 KCNV2Q8TDN2 545 aa8.53□□□□□ -1.04
SNORA40.12-201ENST00000516329 KRTAP3-3Q9BYR6 98 aa8.53□□□□□ -1.04
SNORA40.12-201ENST00000516329 KRTAP3-2Q9BYR7 98 aa8.53□□□□□ -1.04
SNORA40.12-201ENST00000516329 ANO8Q9HCE9 1232 aaPredicted RBP8.52□□□□□ -1.05
SNORA40.12-201ENST00000516329 KDM2AQ9Y2K7 1162 aa8.52□□□□□ -1.05
SNORA40.12-201ENST00000516329 JPH4Q96JJ6 628 aa8.51□□□□□ -1.05
SNORA40.12-201ENST00000516329 AXIN2Q9Y2T1 843 aa8.51□□□□□ -1.05
SNORA40.12-201ENST00000516329 FOSBP53539 338 aa8.5□□□□□ -1.05
SNORA40.12-201ENST00000516329 PDIA6Q15084 440 aa8.5□□□□□ -1.05
SNORA40.12-201ENST00000516329 DDX12PQ92771 950 aa8.5□□□□□ -1.05
SNORA40.12-201ENST00000516329 POTEEQ6S8J3 1075 aa8.48□□□□□ -1.05
SNORA40.12-201ENST00000516329 ARIH1Q9Y4X5 557 aaPredicted RBP8.48□□□□□ -1.05
SNORA40.12-201ENST00000516329 SPDYE16A6NNV3 312 aaPredicted RBP8.47□□□□□ -1.05
SNORA40.12-201ENST00000516329 P3H3Q8IVL6 736 aa8.47□□□□□ -1.05
SNORA40.12-201ENST00000516329 PCDHGA10Q9Y5H3 936 aa8.47□□□□□ -1.05
SNORA40.12-201ENST00000516329 PBX2P40425 430 aa8.46□□□□□ -1.06
SNORA40.12-201ENST00000516329 PSEN2P49810 448 aa8.46□□□□□ -1.06
SNORA40.12-201ENST00000516329 VSIG10Q8N0Z9 540 aa8.46□□□□□ -1.06
SNORA40.12-201ENST00000516329 ZDHHC16Q969W1 377 aa8.46□□□□□ -1.06
SNORA40.12-201ENST00000516329 KCNK17Q96T54 332 aa8.46□□□□□ -1.06
SNORA40.12-201ENST00000516329 ADAM33Q9BZ11 813 aa8.46□□□□□ -1.06
SNORA40.12-201ENST00000516329 PLSCR2Q9NRY7 297 aa8.46□□□□□ -1.06
SNORA40.12-201ENST00000516329 ARHGAP33O14559 1287 aa8.45□□□□□ -1.06
SNORA40.12-201ENST00000516329 ANKRD13DQ6ZTN6 518 aa8.45□□□□□ -1.06
SNORA40.12-201ENST00000516329 ARHGEF1Q92888 912 aaKnown RBP8.45□□□□□ -1.06
SNORA40.12-201ENST00000516329 PHF14O94880 888 aa8.44□□□□□ -1.06
SNORA40.12-201ENST00000516329 LSM11P83369 360 aaKnown RBP eCLIP8.44□□□□□ -1.06
SNORA40.12-201ENST00000516329 NBR1Q14596 966 aa8.44□□□□□ -1.06
SNORA40.12-201ENST00000516329 TYW1BQ6NUM6 668 aa8.44□□□□□ -1.06
SNORA40.12-201ENST00000516329 GRXCR2A6NFK2 248 aa8.43□□□□□ -1.06
SNORA40.12-201ENST00000516329 PTGER2P43116 358 aa8.43□□□□□ -1.06
SNORA40.12-201ENST00000516329 DMRTA1Q5VZB9 504 aa8.43□□□□□ -1.06
SNORA40.12-201ENST00000516329 RBM33Q96EV2 1170 aaKnown RBP8.43□□□□□ -1.06
SNORA40.12-201ENST00000516329 KCNH8Q96L42 1107 aa8.42□□□□□ -1.06
SNORA40.12-201ENST00000516329 BCL2L12Q9HB09 334 aa8.42□□□□□ -1.06
SNORA40.12-201ENST00000516329 PTPREP23469 700 aa8.41□□□□□ -1.06
SNORA40.12-201ENST00000516329 SPNS2Q8IVW8 549 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms