RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 DOK7Q18PE1 504 aa9.23□□□□□ -0.93
CAST-242ENST00000515063 TMEM92Q6UXU6 159 aa9.22□□□□□ -0.93
CAST-242ENST00000515063 C2orf72A6NCS6 295 aa9.2□□□□□ -0.94
CAST-242ENST00000515063 ZNF710Q8N1W2 664 aa9.2□□□□□ -0.94
CAST-242ENST00000515063 KIF3CO14782 793 aa9.19□□□□□ -0.94
CAST-242ENST00000515063 GPHNQ9NQX3 736 aaPredicted RBP9.18□□□□□ -0.94
CAST-242ENST00000515063 ST18O60284 1047 aa9.17□□□□□ -0.94
CAST-242ENST00000515063 PAXIP1Q6ZW49 1069 aaPredicted RBP9.17□□□□□ -0.94
CAST-242ENST00000515063 ZSWIM6Q9HCJ5 1215 aa9.17□□□□□ -0.94
CAST-242ENST00000515063 PDE4AP27815 886 aa9.16□□□□□ -0.94
CAST-242ENST00000515063 CFAP44Q96MT7 982 aa9.16□□□□□ -0.94
CAST-242ENST00000515063 HOXB3P14651 431 aaPredicted RBP9.15□□□□□ -0.94
CAST-242ENST00000515063 FOXK1P85037 733 aa9.14□□□□□ -0.95
CAST-242ENST00000515063 CRISPLD2Q9H0B8 497 aa9.13□□□□□ -0.95
CAST-242ENST00000515063 POTEMA6NI47 508 aa9.11□□□□□ -0.95
CAST-242ENST00000515063 LCE2DQ5TA82 110 aaPredicted RBP9.11□□□□□ -0.95
CAST-242ENST00000515063 SLC34A2O95436 690 aa9.1□□□□□ -0.95
CAST-242ENST00000515063 POTEGQ6S5H5 508 aa9.1□□□□□ -0.95
CAST-242ENST00000515063 PLPP6Q8IY26 295 aa9.1□□□□□ -0.95
CAST-242ENST00000515063 HOXB1P14653 301 aaPredicted RBP9.09□□□□□ -0.95
CAST-242ENST00000515063 EMP3P54852 163 aa9.09□□□□□ -0.95
CAST-242ENST00000515063 DSG2Q14126 1118 aa9.09□□□□□ -0.95
CAST-242ENST00000515063 PPP1R15BQ5SWA1 713 aa9.08□□□□□ -0.96
CAST-242ENST00000515063 DDX27Q96GQ7 796 aaKnown RBP9.08□□□□□ -0.96
CAST-242ENST00000515063 NCKAP5LQ9HCH0 1330 aa9.07□□□□□ -0.96
CAST-242ENST00000515063 LARP6Q9BRS8 491 aaKnown RBP9.07□□□□□ -0.96
CAST-242ENST00000515063 TBC1D12O60347 775 aa9.06□□□□□ -0.96
CAST-242ENST00000515063 MFSD10Q14728 455 aa9.05□□□□□ -0.96
CAST-242ENST00000515063 MARVELD3Q96A59 401 aa9.05□□□□□ -0.96
CAST-242ENST00000515063 PCDH10Q9P2E7 1040 aa9.05□□□□□ -0.96
CAST-242ENST00000515063 GPR153Q6NV75 609 aa9.04□□□□□ -0.96
CAST-242ENST00000515063 CADPS2Q86UW7 1296 aa9.03□□□□□ -0.96
CAST-242ENST00000515063 PTCD2Q8WV60 388 aaKnown RBP9.03□□□□□ -0.96
CAST-242ENST00000515063 ARSIQ5FYB1 569 aa9.02□□□□□ -0.97
CAST-242ENST00000515063 PCDHGA4Q9Y5G9 962 aa9.02□□□□□ -0.97
CAST-242ENST00000515063 ERBB3P21860 1342 aa9.01□□□□□ -0.97
CAST-242ENST00000515063 ZNF316A6NFI3 1004 aaPredicted RBP9□□□□□ -0.97
CAST-242ENST00000515063 PLCB2Q00722 1185 aa9□□□□□ -0.97
CAST-242ENST00000515063 WDR70Q9NW82 654 aa9□□□□□ -0.97
CAST-242ENST00000515063 FAM205CA6NFA0 338 aa8.99□□□□□ -0.97
CAST-242ENST00000515063 PSDA5PKW4 1024 aaPredicted RBP8.97□□□□□ -0.97
CAST-242ENST00000515063 OXER1Q8TDS5 423 aa8.97□□□□□ -0.97
CAST-242ENST00000515063 HS3ST6Q96QI5 342 aa8.97□□□□□ -0.97
CAST-242ENST00000515063 NUDT7P0C024 238 aa8.96□□□□□ -0.98
CAST-242ENST00000515063 UPF1Q92900 1129 aaKnown RBP eCLIP8.96□□□□□ -0.98
CAST-242ENST00000515063 CDAN1Q8IWY9 1227 aa8.95□□□□□ -0.98
CAST-242ENST00000515063 VARS2Q5ST30 1063 aaKnown RBP8.94□□□□□ -0.98
CAST-242ENST00000515063 KHSRPQ92945 711 aaKnown RBP eCLIP8.94□□□□□ -0.98
CAST-242ENST00000515063 MAP3K9P80192 1104 aa8.93□□□□□ -0.98
CAST-242ENST00000515063 CAMK2BQ13554 666 aa8.93□□□□□ -0.98
CAST-242ENST00000515063 TSHZ2Q9NRE2 1034 aa8.93□□□□□ -0.98
CAST-242ENST00000515063 E2F4Q16254 413 aa8.91□□□□□ -0.98
CAST-242ENST00000515063 LHX6Q9UPM6 363 aa8.9□□□□□ -0.98
CAST-242ENST00000515063 KDM4FA0A1W2PPD8 638 aa8.88□□□□□ -0.99
CAST-242ENST00000515063 EVI5O60447 810 aa8.88□□□□□ -0.99
CAST-242ENST00000515063 ZNF687Q8N1G0 1237 aa8.88□□□□□ -0.99
CAST-242ENST00000515063 EMILIN3Q9NT22 766 aa8.88□□□□□ -0.99
CAST-242ENST00000515063 HAP1P54257 671 aaPredicted RBP8.87□□□□□ -0.99
CAST-242ENST00000515063 PPP4R3BQ5MIZ7 849 aa8.87□□□□□ -0.99
CAST-242ENST00000515063 POTEB3A0JP26 581 aa8.86□□□□□ -0.99
CAST-242ENST00000515063 PBX2P40425 430 aa8.86□□□□□ -0.99
CAST-242ENST00000515063 POTEBQ6S5H4 581 aa8.86□□□□□ -0.99
CAST-242ENST00000515063 KCNH8Q96L42 1107 aa8.85□□□□□ -0.99
CAST-242ENST00000515063 DPYSL4O14531 572 aa8.84□□□□□ -0.99
CAST-242ENST00000515063 P3H3Q8IVL6 736 aa8.84□□□□□ -0.99
CAST-242ENST00000515063 ANO8Q9HCE9 1232 aaPredicted RBP8.84□□□□□ -0.99
CAST-242ENST00000515063 SPDYE16A6NNV3 312 aaPredicted RBP8.83□□□□□ -1
CAST-242ENST00000515063 ARIH1Q9Y4X5 557 aaPredicted RBP8.83□□□□□ -1
CAST-242ENST00000515063 JPH4Q96JJ6 628 aa8.82□□□□□ -1
CAST-242ENST00000515063 ZNF454Q8N9F8 522 aa8.81□□□□□ -1
CAST-242ENST00000515063 FOSBP53539 338 aa8.8□□□□□ -1
CAST-242ENST00000515063 PDIA6Q15084 440 aa8.8□□□□□ -1
CAST-242ENST00000515063 KRTAP3-3Q9BYR6 98 aa8.79□□□□□ -1
CAST-242ENST00000515063 KRTAP3-2Q9BYR7 98 aa8.79□□□□□ -1
CAST-242ENST00000515063 ARHGEF1Q92888 912 aaKnown RBP8.78□□□□□ -1
CAST-242ENST00000515063 FBXW7Q969H0 707 aa8.78□□□□□ -1
CAST-242ENST00000515063 ARHGAP33O14559 1287 aa8.77□□□□□ -1.01
CAST-242ENST00000515063 PHF14O94880 888 aa8.77□□□□□ -1.01
CAST-242ENST00000515063 ZDHHC16Q969W1 377 aa8.77□□□□□ -1.01
CAST-242ENST00000515063 PTGER2P43116 358 aa8.76□□□□□ -1.01
CAST-242ENST00000515063 TYW1BQ6NUM6 668 aa8.76□□□□□ -1.01
CAST-242ENST00000515063 EPAS1Q99814 870 aa8.76□□□□□ -1.01
CAST-242ENST00000515063 BCL2L12Q9HB09 334 aa8.76□□□□□ -1.01
CAST-242ENST00000515063 PTPREP23469 700 aa8.75□□□□□ -1.01
CAST-242ENST00000515063 LSM11P83369 360 aaKnown RBP eCLIP8.75□□□□□ -1.01
CAST-242ENST00000515063 VSIG10Q8N0Z9 540 aa8.75□□□□□ -1.01
CAST-242ENST00000515063 KCNV2Q8TDN2 545 aa8.74□□□□□ -1.01
CAST-242ENST00000515063 PLSCR2Q9NRY7 297 aa8.74□□□□□ -1.01
CAST-242ENST00000515063 KCNK17Q96T54 332 aa8.73□□□□□ -1.01
CAST-242ENST00000515063 PCDHGA10Q9Y5H3 936 aa8.73□□□□□ -1.01
CAST-242ENST00000515063 ANKRD13DQ6ZTN6 518 aa8.72□□□□□ -1.01
CAST-242ENST00000515063 AXIN2Q9Y2T1 843 aa8.71□□□□□ -1.02
CAST-242ENST00000515063 TK2O00142 265 aa8.7□□□□□ -1.02
CAST-242ENST00000515063 SPNS2Q8IVW8 549 aa8.7□□□□□ -1.02
CAST-242ENST00000515063 DDX12PQ92771 950 aa8.7□□□□□ -1.02
CAST-242ENST00000515063 NBR1Q14596 966 aa8.69□□□□□ -1.02
CAST-242ENST00000515063 POTEEQ6S8J3 1075 aa8.69□□□□□ -1.02
CAST-242ENST00000515063 ADAM33Q9BZ11 813 aa8.69□□□□□ -1.02
CAST-242ENST00000515063 PSEN2P49810 448 aa8.68□□□□□ -1.02
CAST-242ENST00000515063 GRXCR2A6NFK2 248 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms