RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 PTPRMP28827 1452 aa21.77■■□□□ 1.08
PFDN1-206ENST00000514611 MADDQ8WXG6 1647 aa21.77■■□□□ 1.08
PFDN1-206ENST00000514611 ZFYVE16Q7Z3T8 1539 aa21.77■■□□□ 1.08
PFDN1-206ENST00000514611 CLIP1P30622 1438 aa21.77■■□□□ 1.08
PFDN1-206ENST00000514611 CASKIN1Q8WXD9 1431 aa21.77■■□□□ 1.08
PFDN1-206ENST00000514611 CCDC18Q5T9S5 1454 aa21.74■■□□□ 1.07
PFDN1-206ENST00000514611 SIGLEC1Q9BZZ2 1709 aa21.74■■□□□ 1.07
PFDN1-206ENST00000514611 ARHGAP5Q13017 1502 aa21.73■■□□□ 1.07
PFDN1-206ENST00000514611 MAGI2Q86UL8 1455 aa21.72■■□□□ 1.07
PFDN1-206ENST00000514611 EFCAB2Q5VUJ9 269 aa21.71■■□□□ 1.07
PFDN1-206ENST00000514611 FYCO1Q9BQS8 1478 aa21.71■■□□□ 1.07
PFDN1-206ENST00000514611 RIMS1Q86UR5 1692 aaKnown RBP21.67■■□□□ 1.06
PFDN1-206ENST00000514611 ZNF518AQ6AHZ1 1483 aa21.65■■□□□ 1.06
PFDN1-206ENST00000514611 PREX2Q70Z35 1606 aa21.65■■□□□ 1.06
PFDN1-206ENST00000514611 CDC42BPBQ9Y5S2 1711 aa21.64■■□□□ 1.06
PFDN1-206ENST00000514611 KDM5CP41229 1560 aa21.64■■□□□ 1.05
PFDN1-206ENST00000514611 C9orf84Q5VXU9 1444 aa21.63■■□□□ 1.05
PFDN1-206ENST00000514611 ABCC1P33527 1531 aa21.61■■□□□ 1.05
PFDN1-206ENST00000514611 ATP10AO60312 1499 aa21.61■■□□□ 1.05
PFDN1-206ENST00000514611 MLECQ14165 292 aa21.61■■□□□ 1.05
PFDN1-206ENST00000514611 AFAP1Q8N556 730 aa21.61■■□□□ 1.05
PFDN1-206ENST00000514611 ARHGEF12Q9NZN5 1544 aa21.59■■□□□ 1.05
PFDN1-206ENST00000514611 LMTK3Q96Q04 1460 aa21.58■■□□□ 1.04
PFDN1-206ENST00000514611 TRAPPC8Q9Y2L5 1435 aa21.57■■□□□ 1.04
PFDN1-206ENST00000514611 PLPPR3Q6T4P5 718 aa21.57■■□□□ 1.04
PFDN1-206ENST00000514611 CDC42BPAQ5VT25 1732 aa21.57■■□□□ 1.04
PFDN1-206ENST00000514611 DIP2CQ9Y2E4 1556 aa21.57■■□□□ 1.04
PFDN1-206ENST00000514611 ITSN2Q9NZM3 1697 aa21.56■■□□□ 1.04
PFDN1-206ENST00000514611 FER1L4A9Z1Z3 1794 aa21.56■■□□□ 1.04
PFDN1-206ENST00000514611 ABCA6Q8N139 1617 aa21.55■■□□□ 1.04
PFDN1-206ENST00000514611 ILDR1Q86SU0 546 aaPredicted RBP21.53■■□□□ 1.04
PFDN1-206ENST00000514611 MYT1LQ9UL68 1186 aa21.53■■□□□ 1.04
PFDN1-206ENST00000514611 CEP162Q5TB80 1403 aa21.53■■□□□ 1.04
PFDN1-206ENST00000514611 MLH3Q9UHC1 1453 aa21.52■■□□□ 1.04
PFDN1-206ENST00000514611 SAMD9LQ8IVG5 1584 aa21.52■■□□□ 1.04
PFDN1-206ENST00000514611 GPATCH8Q9UKJ3 1502 aaKnown RBP21.51■■□□□ 1.03
PFDN1-206ENST00000514611 REREQ9P2R6 1566 aa21.49■■□□□ 1.03
PFDN1-206ENST00000514611 SYCP2Q9BX26 1530 aa21.49■■□□□ 1.03
PFDN1-206ENST00000514611 ZNF777Q9ULD5 760 aaPredicted RBP21.48■■□□□ 1.03
PFDN1-206ENST00000514611 MTUS2Q5JR59 1369 aa21.47■■□□□ 1.03
PFDN1-206ENST00000514611 KIDINS220Q9ULH0 1771 aa21.45■■□□□ 1.02
PFDN1-206ENST00000514611 HSPA2P54652 639 aa21.44■■□□□ 1.02
PFDN1-206ENST00000514611 EHBP1L1Q8N3D4 1523 aa21.44■■□□□ 1.02
PFDN1-206ENST00000514611 CCNB3Q8WWL7 1395 aa21.43■■□□□ 1.02
PFDN1-206ENST00000514611 TIAM1Q13009 1591 aa21.41■■□□□ 1.02
PFDN1-206ENST00000514611 AGLP35573 1532 aa21.41■■□□□ 1.02
PFDN1-206ENST00000514611 CEBPAP49715 358 aaPredicted RBP21.41■■□□□ 1.02
PFDN1-206ENST00000514611 HNRNPMP52272 730 aaKnown RBP eCLIP21.4■■□□□ 1.02
PFDN1-206ENST00000514611 CFDP1Q9UEE9 299 aaPredicted RBP21.4■■□□□ 1.02
PFDN1-206ENST00000514611 KIAA1107Q9UPP5 1409 aa21.38■■□□□ 1.01
PFDN1-206ENST00000514611 PLEKHH2Q8IVE3 1493 aa21.37■■□□□ 1.01
PFDN1-206ENST00000514611 SPAG9O60271 1321 aaKnown RBP21.36■■□□□ 1.01
PFDN1-206ENST00000514611 ATP7AQ04656 1500 aa21.36■■□□□ 1.01
PFDN1-206ENST00000514611 INO80Q9ULG1 1556 aaPredicted RBP21.36■■□□□ 1.01
PFDN1-206ENST00000514611 PREX1Q8TCU6 1659 aa21.35■■□□□ 1.01
PFDN1-206ENST00000514611 LOC105371045A0A1W2PR82 267 aa21.34■■□□□ 1.01
PFDN1-206ENST00000514611 ZNF644Q9H582 1327 aaPredicted RBP21.33■■□□□ 1.01
PFDN1-206ENST00000514611 C3P01024 1663 aa21.32■■□□□ 1
PFDN1-206ENST00000514611 PLXNC1O60486 1568 aa21.31■■□□□ 1
PFDN1-206ENST00000514611 NCOA2Q15596 1464 aa21.3■■□□□ 1
PFDN1-206ENST00000514611 MBD5Q9P267 1494 aa21.29■■□□□ 1
PFDN1-206ENST00000514611 UHRF1BP1Q6BDS2 1440 aa21.29■■□□□ 1
PFDN1-206ENST00000514611 VPS8Q8N3P4 1428 aa21.29■■□□□ 1
PFDN1-206ENST00000514611 A2MP01023 1474 aa21.28■■□□□ 1
PFDN1-206ENST00000514611 ESF1Q9H501 851 aaKnown RBP21.28■■□□□ 1
PFDN1-206ENST00000514611 SUPT6HQ7KZ85 1726 aaKnown RBP21.28■■□□□ 1
PFDN1-206ENST00000514611 CNTLNQ9NXG0 1405 aa21.27■■□□□ 1
PFDN1-206ENST00000514611 CAMSAP2Q08AD1 1489 aa21.24■□□□□ 0.99
PFDN1-206ENST00000514611 FBXO41Q8TF61 875 aa21.22■□□□□ 0.99
PFDN1-206ENST00000514611 LRRC9Q6ZRR7 1453 aa21.21■□□□□ 0.99
PFDN1-206ENST00000514611 MROH2AA6NES4 1674 aa21.21■□□□□ 0.99
PFDN1-206ENST00000514611 CCDC141Q6ZP82 1450 aa21.2■□□□□ 0.98
PFDN1-206ENST00000514611 ADGBQ8N7X0 1667 aa21.2■□□□□ 0.98
PFDN1-206ENST00000514611 RTEL1-TNFRSF6BF6WH68 1400 aa21.19■□□□□ 0.98
PFDN1-206ENST00000514611 CLTCQ00610 1675 aaKnown RBP21.18■□□□□ 0.98
PFDN1-206ENST00000514611 STRCQ7RTU9 1775 aa21.18■□□□□ 0.98
PFDN1-206ENST00000514611 ZMYM3Q14202 1370 aa21.18■□□□□ 0.98
PFDN1-206ENST00000514611 GGT6Q6P531 493 aa21.17■□□□□ 0.98
PFDN1-206ENST00000514611 NPATQ14207 1427 aa21.15■□□□□ 0.98
PFDN1-206ENST00000514611 SETD1BQ9UPS6 1966 aaKnown RBP21.14■□□□□ 0.98
PFDN1-206ENST00000514611 KANK4Q5T7N3 995 aaPredicted RBP21.14■□□□□ 0.97
PFDN1-206ENST00000514611 DHX29Q7Z478 1369 aaKnown RBP21.12■□□□□ 0.97
PFDN1-206ENST00000514611 ARHGEF5Q12774 1597 aa21.12■□□□□ 0.97
PFDN1-206ENST00000514611 MAP3K1Q13233 1512 aa21.12■□□□□ 0.97
PFDN1-206ENST00000514611 PTPRKQ15262 1439 aa21.11■□□□□ 0.97
PFDN1-206ENST00000514611 MYO3AQ8NEV4 1616 aa21.1■□□□□ 0.97
PFDN1-206ENST00000514611 CERKQ8TCT0 537 aa21.09■□□□□ 0.97
PFDN1-206ENST00000514611 NCOA1Q15788 1441 aa21.09■□□□□ 0.97
PFDN1-206ENST00000514611 RSPH4AQ5TD94 716 aa21.07■□□□□ 0.96
PFDN1-206ENST00000514611 DMRT2Q9Y5R5 561 aa21.07■□□□□ 0.96
PFDN1-206ENST00000514611 CAMSAP1Q5T5Y3 1602 aa21.07■□□□□ 0.96
PFDN1-206ENST00000514611 PTPRTO14522 1441 aa21.06■□□□□ 0.96
PFDN1-206ENST00000514611 KIF3BO15066 747 aa21.06■□□□□ 0.96
PFDN1-206ENST00000514611 MYOM3Q5VTT5 1437 aa21.05■□□□□ 0.96
PFDN1-206ENST00000514611 PPP6R1Q9UPN7 881 aa21.05■□□□□ 0.96
PFDN1-206ENST00000514611 CEP170BQ9Y4F5 1589 aaPredicted RBP21.05■□□□□ 0.96
PFDN1-206ENST00000514611 ZNF142P52746 1687 aaPredicted RBP21.05■□□□□ 0.96
PFDN1-206ENST00000514611 KDM5DQ9BY66 1539 aa21.04■□□□□ 0.96
PFDN1-206ENST00000514611 MIA2Q96PC5 1412 aa21.03■□□□□ 0.96
PFDN1-206ENST00000514611 MAST1Q9Y2H9 1570 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms