RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 CDC42BPAQ5VT25 1732 aa30.36■■■□□ 2.45
LPCAT1-206ENST00000514484 ARHGEF40Q8TER5 1519 aa30.35■■■□□ 2.45
LPCAT1-206ENST00000514484 SCAPERQ9BY12 1400 aa30.33■■■□□ 2.45
LPCAT1-206ENST00000514484 ZMYM4Q5VZL5 1548 aa30.32■■■□□ 2.44
LPCAT1-206ENST00000514484 EFCAB2Q5VUJ9 269 aa30.31■■■□□ 2.44
LPCAT1-206ENST00000514484 POGZQ7Z3K3 1410 aa30.3■■■□□ 2.44
LPCAT1-206ENST00000514484 ZFYVE16Q7Z3T8 1539 aa30.25■■■□□ 2.43
LPCAT1-206ENST00000514484 MTUS2Q5JR59 1369 aa30.25■■■□□ 2.43
LPCAT1-206ENST00000514484 YEATS2Q9ULM3 1422 aa30.24■■■□□ 2.43
LPCAT1-206ENST00000514484 EHBP1L1Q8N3D4 1523 aa30.22■■■□□ 2.43
LPCAT1-206ENST00000514484 ITSN2Q9NZM3 1697 aa30.21■■■□□ 2.43
LPCAT1-206ENST00000514484 SIGLEC1Q9BZZ2 1709 aa30.21■■■□□ 2.43
LPCAT1-206ENST00000514484 ABCC1P33527 1531 aa30.21■■■□□ 2.43
LPCAT1-206ENST00000514484 VPS8Q8N3P4 1428 aa30.2■■■□□ 2.42
LPCAT1-206ENST00000514484 BCORL1Q5H9F3 1711 aa30.19■■■□□ 2.42
LPCAT1-206ENST00000514484 ZNF518AQ6AHZ1 1483 aa30.18■■■□□ 2.42
LPCAT1-206ENST00000514484 GPATCH8Q9UKJ3 1502 aaKnown RBP30.17■■■□□ 2.42
LPCAT1-206ENST00000514484 KDM5CP41229 1560 aa30.16■■■□□ 2.42
LPCAT1-206ENST00000514484 MAGI2Q86UL8 1455 aa30.16■■■□□ 2.42
LPCAT1-206ENST00000514484 ADAMTSL3P82987 1691 aa30.16■■■□□ 2.42
LPCAT1-206ENST00000514484 ARHGEF12Q9NZN5 1544 aa30.16■■■□□ 2.42
LPCAT1-206ENST00000514484 SAMD9LQ8IVG5 1584 aa30.15■■■□□ 2.42
LPCAT1-206ENST00000514484 ARID4BQ4LE39 1312 aaPredicted RBP30.15■■■□□ 2.42
LPCAT1-206ENST00000514484 TIAM1Q13009 1591 aa30.15■■■□□ 2.42
LPCAT1-206ENST00000514484 HECW2Q9P2P5 1572 aa30.13■■■□□ 2.41
LPCAT1-206ENST00000514484 AFAP1Q8N556 730 aa30.12■■■□□ 2.41
LPCAT1-206ENST00000514484 CCNB3Q8WWL7 1395 aa30.12■■■□□ 2.41
LPCAT1-206ENST00000514484 TRAPPC8Q9Y2L5 1435 aa30.11■■■□□ 2.41
LPCAT1-206ENST00000514484 MADDQ8WXG6 1647 aa30.11■■■□□ 2.41
LPCAT1-206ENST00000514484 ZNF777Q9ULD5 760 aaPredicted RBP30.1■■■□□ 2.41
LPCAT1-206ENST00000514484 SYCP2Q9BX26 1530 aa30.09■■■□□ 2.41
LPCAT1-206ENST00000514484 SUPT6HQ7KZ85 1726 aaKnown RBP30.08■■■□□ 2.41
LPCAT1-206ENST00000514484 ABCA6Q8N139 1617 aa30.05■■■□□ 2.4
LPCAT1-206ENST00000514484 DIP2CQ9Y2E4 1556 aa30.04■■■□□ 2.4
LPCAT1-206ENST00000514484 RIMS1Q86UR5 1692 aaKnown RBP30.04■■■□□ 2.4
LPCAT1-206ENST00000514484 CFDP1Q9UEE9 299 aaPredicted RBP30.03■■■□□ 2.4
LPCAT1-206ENST00000514484 MYT1LQ9UL68 1186 aa30.03■■■□□ 2.4
LPCAT1-206ENST00000514484 ATP10AO60312 1499 aa30.03■■■□□ 2.4
LPCAT1-206ENST00000514484 C9orf84Q5VXU9 1444 aa30.03■■■□□ 2.4
LPCAT1-206ENST00000514484 NCOA2Q15596 1464 aa30.01■■■□□ 2.4
LPCAT1-206ENST00000514484 KIDINS220Q9ULH0 1771 aa30■■■□□ 2.39
LPCAT1-206ENST00000514484 PTPRMP28827 1452 aa29.99■■■□□ 2.39
LPCAT1-206ENST00000514484 MLH3Q9UHC1 1453 aa29.99■■■□□ 2.39
LPCAT1-206ENST00000514484 LRRC9Q6ZRR7 1453 aa29.98■■■□□ 2.39
LPCAT1-206ENST00000514484 FER1L4A9Z1Z3 1794 aa29.97■■■□□ 2.39
LPCAT1-206ENST00000514484 HNRNPMP52272 730 aaKnown RBP eCLIP29.96■■■□□ 2.393e-6■□□□□ 9
LPCAT1-206ENST00000514484 MLECQ14165 292 aa29.95■■■□□ 2.39
LPCAT1-206ENST00000514484 PLEKHH2Q8IVE3 1493 aa29.94■■■□□ 2.38
LPCAT1-206ENST00000514484 ZNF644Q9H582 1327 aaPredicted RBP29.93■■■□□ 2.38
LPCAT1-206ENST00000514484 MAP3K1Q13233 1512 aa29.92■■■□□ 2.38
LPCAT1-206ENST00000514484 KIAA1107Q9UPP5 1409 aa29.92■■■□□ 2.38
LPCAT1-206ENST00000514484 REREQ9P2R6 1566 aa29.9■■■□□ 2.38
LPCAT1-206ENST00000514484 KANK4Q5T7N3 995 aaPredicted RBP29.9■■■□□ 2.38
LPCAT1-206ENST00000514484 INO80Q9ULG1 1556 aaPredicted RBP29.9■■■□□ 2.38
LPCAT1-206ENST00000514484 ATP7AQ04656 1500 aa29.87■■■□□ 2.37
LPCAT1-206ENST00000514484 CAMSAP2Q08AD1 1489 aa29.86■■■□□ 2.37
LPCAT1-206ENST00000514484 SPAG9O60271 1321 aaKnown RBP29.85■■■□□ 2.37
LPCAT1-206ENST00000514484 MBD5Q9P267 1494 aa29.83■■■□□ 2.37
LPCAT1-206ENST00000514484 PLPPR3Q6T4P5 718 aa29.82■■■□□ 2.36
LPCAT1-206ENST00000514484 AGLP35573 1532 aa29.79■■■□□ 2.36
LPCAT1-206ENST00000514484 APLP2Q06481 763 aa29.75■■■□□ 2.35
LPCAT1-206ENST00000514484 ADGBQ8N7X0 1667 aa29.74■■■□□ 2.35
LPCAT1-206ENST00000514484 CCDC141Q6ZP82 1450 aa29.74■■■□□ 2.35
LPCAT1-206ENST00000514484 PLXNC1O60486 1568 aa29.73■■■□□ 2.35
LPCAT1-206ENST00000514484 MYOM3Q5VTT5 1437 aa29.72■■■□□ 2.35
LPCAT1-206ENST00000514484 ARHGEF5Q12774 1597 aa29.7■■■□□ 2.35
LPCAT1-206ENST00000514484 A2MP01023 1474 aa29.7■■■□□ 2.35
LPCAT1-206ENST00000514484 LMTK3Q96Q04 1460 aa29.66■■■□□ 2.34
LPCAT1-206ENST00000514484 C3P01024 1663 aa29.66■■■□□ 2.34
LPCAT1-206ENST00000514484 RTEL1-TNFRSF6BF6WH68 1400 aa29.64■■■□□ 2.34
LPCAT1-206ENST00000514484 MIA2Q96PC5 1412 aa29.63■■■□□ 2.33
LPCAT1-206ENST00000514484 CEBPAP49715 358 aaPredicted RBP29.63■■■□□ 2.33
LPCAT1-206ENST00000514484 PTPN23Q9H3S7 1636 aa29.6■■■□□ 2.33
LPCAT1-206ENST00000514484 CLTCQ00610 1675 aaKnown RBP29.58■■■□□ 2.33
LPCAT1-206ENST00000514484 PREX1Q8TCU6 1659 aa29.57■■■□□ 2.32
LPCAT1-206ENST00000514484 RSPH4AQ5TD94 716 aa29.56■■■□□ 2.32
LPCAT1-206ENST00000514484 ESF1Q9H501 851 aaKnown RBP29.56■■■□□ 2.32
LPCAT1-206ENST00000514484 MROH2AA6NES4 1674 aa29.55■■■□□ 2.32
LPCAT1-206ENST00000514484 MAST1Q9Y2H9 1570 aa29.55■■■□□ 2.32
LPCAT1-206ENST00000514484 CROCC2H7BZ55 1655 aa29.54■■■□□ 2.32
LPCAT1-206ENST00000514484 FGD6Q6ZV73 1430 aa29.53■■■□□ 2.32
LPCAT1-206ENST00000514484 CNTLNQ9NXG0 1405 aa29.53■■■□□ 2.32
LPCAT1-206ENST00000514484 DHX29Q7Z478 1369 aaKnown RBP29.52■■■□□ 2.32
LPCAT1-206ENST00000514484 GGT6Q6P531 493 aa29.51■■■□□ 2.31
LPCAT1-206ENST00000514484 SETD1BQ9UPS6 1966 aaKnown RBP29.5■■■□□ 2.31
LPCAT1-206ENST00000514484 TSPY4P0CV99 314 aa29.5■■■□□ 2.31
LPCAT1-206ENST00000514484 TSPY10P0CW01 314 aa29.5■■■□□ 2.31
LPCAT1-206ENST00000514484 HSPA2P54652 639 aa29.5■■■□□ 2.31
LPCAT1-206ENST00000514484 TCOF1Q13428 1488 aaKnown RBP29.46■■■□□ 2.31
LPCAT1-206ENST00000514484 DNMT1P26358 1616 aaKnown RBP29.45■■■□□ 2.31
LPCAT1-206ENST00000514484 KIF3BO15066 747 aa29.43■■■□□ 2.3
LPCAT1-206ENST00000514484 ABCC5O15440 1437 aa29.43■■■□□ 2.3
LPCAT1-206ENST00000514484 ZMYM3Q14202 1370 aa29.41■■■□□ 2.3
LPCAT1-206ENST00000514484 UHRF1BP1Q6BDS2 1440 aa29.41■■■□□ 2.3
LPCAT1-206ENST00000514484 SHANK2Q9UPX8 1470 aa29.41■■■□□ 2.3
LPCAT1-206ENST00000514484 DAPK1P53355 1430 aa29.4■■■□□ 2.3
LPCAT1-206ENST00000514484 RNF17Q9BXT8 1623 aaKnown RBP29.37■■■□□ 2.29
LPCAT1-206ENST00000514484 KDM5DQ9BY66 1539 aa29.36■■■□□ 2.29
LPCAT1-206ENST00000514484 EIF2AK4Q9P2K8 1649 aaKnown RBP29.36■■■□□ 2.29
LPCAT1-206ENST00000514484 DUOX2Q9NRD8 1548 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms