RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 SIGLEC1Q9BZZ2 1709 aa20.05■□□□□ 0.8
SNHG4-208ENST00000514110 TROQ12816 1431 aaPredicted RBP20.04■□□□□ 0.8
SNHG4-208ENST00000514110 POGZQ7Z3K3 1410 aa20.04■□□□□ 0.8
SNHG4-208ENST00000514110 ILDR1Q86SU0 546 aaPredicted RBP20.03■□□□□ 0.8
SNHG4-208ENST00000514110 MAGI2Q86UL8 1455 aa20.03■□□□□ 0.8
SNHG4-208ENST00000514110 EFCAB2Q5VUJ9 269 aa20.02■□□□□ 0.8
SNHG4-208ENST00000514110 RIMS1Q86UR5 1692 aaKnown RBP20■□□□□ 0.79
SNHG4-208ENST00000514110 PCF11O94913 1555 aaKnown RBP20■□□□□ 0.79
SNHG4-208ENST00000514110 CLIP1P30622 1438 aa19.99■□□□□ 0.79
SNHG4-208ENST00000514110 CASKIN1Q8WXD9 1431 aa19.99■□□□□ 0.79
SNHG4-208ENST00000514110 ARHGAP5Q13017 1502 aa19.97■□□□□ 0.79
SNHG4-208ENST00000514110 CCDC18Q5T9S5 1454 aa19.95■□□□□ 0.78
SNHG4-208ENST00000514110 CDC42BPBQ9Y5S2 1711 aa19.93■□□□□ 0.78
SNHG4-208ENST00000514110 ATP10AO60312 1499 aa19.93■□□□□ 0.78
SNHG4-208ENST00000514110 MLECQ14165 292 aa19.93■□□□□ 0.78
SNHG4-208ENST00000514110 ZNF518AQ6AHZ1 1483 aa19.92■□□□□ 0.78
SNHG4-208ENST00000514110 LMTK3Q96Q04 1460 aa19.92■□□□□ 0.78
SNHG4-208ENST00000514110 PLPPR3Q6T4P5 718 aa19.91■□□□□ 0.78
SNHG4-208ENST00000514110 AFAP1Q8N556 730 aa19.91■□□□□ 0.78
SNHG4-208ENST00000514110 C9orf84Q5VXU9 1444 aa19.91■□□□□ 0.78
SNHG4-208ENST00000514110 KDM5CP41229 1560 aa19.91■□□□□ 0.78
SNHG4-208ENST00000514110 FYCO1Q9BQS8 1478 aa19.9■□□□□ 0.78
SNHG4-208ENST00000514110 PREX2Q70Z35 1606 aa19.9■□□□□ 0.78
SNHG4-208ENST00000514110 FER1L4A9Z1Z3 1794 aa19.89■□□□□ 0.77
SNHG4-208ENST00000514110 ARHGEF12Q9NZN5 1544 aa19.87■□□□□ 0.77
SNHG4-208ENST00000514110 ABCC1P33527 1531 aa19.86■□□□□ 0.77
SNHG4-208ENST00000514110 CDC42BPAQ5VT25 1732 aa19.85■□□□□ 0.77
SNHG4-208ENST00000514110 TRAPPC8Q9Y2L5 1435 aa19.85■□□□□ 0.77
SNHG4-208ENST00000514110 DIP2CQ9Y2E4 1556 aa19.84■□□□□ 0.77
SNHG4-208ENST00000514110 HSPA2P54652 639 aa19.83■□□□□ 0.77
SNHG4-208ENST00000514110 MYT1LQ9UL68 1186 aa19.83■□□□□ 0.77
SNHG4-208ENST00000514110 ITSN2Q9NZM3 1697 aa19.83■□□□□ 0.76
SNHG4-208ENST00000514110 MLH3Q9UHC1 1453 aa19.82■□□□□ 0.76
SNHG4-208ENST00000514110 ABCA6Q8N139 1617 aa19.82■□□□□ 0.76
SNHG4-208ENST00000514110 REREQ9P2R6 1566 aa19.79■□□□□ 0.76
SNHG4-208ENST00000514110 GPATCH8Q9UKJ3 1502 aaKnown RBP19.77■□□□□ 0.76
SNHG4-208ENST00000514110 CEBPAP49715 358 aaPredicted RBP19.77■□□□□ 0.76
SNHG4-208ENST00000514110 SAMD9LQ8IVG5 1584 aa19.77■□□□□ 0.76
SNHG4-208ENST00000514110 KIDINS220Q9ULH0 1771 aa19.76■□□□□ 0.75
SNHG4-208ENST00000514110 ZNF777Q9ULD5 760 aaPredicted RBP19.76■□□□□ 0.75
SNHG4-208ENST00000514110 AGLP35573 1532 aa19.73■□□□□ 0.75
SNHG4-208ENST00000514110 SYCP2Q9BX26 1530 aa19.73■□□□□ 0.75
SNHG4-208ENST00000514110 PREX1Q8TCU6 1659 aa19.72■□□□□ 0.75
SNHG4-208ENST00000514110 FBXO41Q8TF61 875 aa19.72■□□□□ 0.75
SNHG4-208ENST00000514110 HNRNPMP52272 730 aaKnown RBP eCLIP19.71■□□□□ 0.75
SNHG4-208ENST00000514110 MTUS2Q5JR59 1369 aa19.7■□□□□ 0.74
SNHG4-208ENST00000514110 CCNB3Q8WWL7 1395 aa19.7■□□□□ 0.74
SNHG4-208ENST00000514110 CEP162Q5TB80 1403 aa19.68■□□□□ 0.74
SNHG4-208ENST00000514110 CFDP1Q9UEE9 299 aaPredicted RBP19.68■□□□□ 0.74
SNHG4-208ENST00000514110 C3P01024 1663 aa19.68■□□□□ 0.74
SNHG4-208ENST00000514110 SPAG9O60271 1321 aaKnown RBP19.67■□□□□ 0.74
SNHG4-208ENST00000514110 KIAA1107Q9UPP5 1409 aa19.67■□□□□ 0.74
SNHG4-208ENST00000514110 PLEKHH2Q8IVE3 1493 aa19.65■□□□□ 0.74
SNHG4-208ENST00000514110 ESF1Q9H501 851 aaKnown RBP19.64■□□□□ 0.73
SNHG4-208ENST00000514110 UHRF1BP1Q6BDS2 1440 aa19.64■□□□□ 0.73
SNHG4-208ENST00000514110 ATP7AQ04656 1500 aa19.64■□□□□ 0.73
SNHG4-208ENST00000514110 EHBP1L1Q8N3D4 1523 aa19.64■□□□□ 0.73
SNHG4-208ENST00000514110 TIAM1Q13009 1591 aa19.64■□□□□ 0.73
SNHG4-208ENST00000514110 INO80Q9ULG1 1556 aaPredicted RBP19.63■□□□□ 0.73
SNHG4-208ENST00000514110 ZNF644Q9H582 1327 aaPredicted RBP19.61■□□□□ 0.73
SNHG4-208ENST00000514110 SUPT6HQ7KZ85 1726 aaKnown RBP19.61■□□□□ 0.73
SNHG4-208ENST00000514110 SETD1BQ9UPS6 1966 aaKnown RBP19.61■□□□□ 0.73
SNHG4-208ENST00000514110 CNTLNQ9NXG0 1405 aa19.6■□□□□ 0.73
SNHG4-208ENST00000514110 STRCQ7RTU9 1775 aa19.6■□□□□ 0.73
SNHG4-208ENST00000514110 PLXNC1O60486 1568 aa19.59■□□□□ 0.73
SNHG4-208ENST00000514110 A2MP01023 1474 aa19.57■□□□□ 0.72
SNHG4-208ENST00000514110 MBD5Q9P267 1494 aa19.57■□□□□ 0.72
SNHG4-208ENST00000514110 MROH2AA6NES4 1674 aa19.56■□□□□ 0.72
SNHG4-208ENST00000514110 CERKQ8TCT0 537 aa19.55■□□□□ 0.72
SNHG4-208ENST00000514110 ZMYM3Q14202 1370 aa19.54■□□□□ 0.72
SNHG4-208ENST00000514110 NCOA2Q15596 1464 aa19.54■□□□□ 0.72
SNHG4-208ENST00000514110 LOC105371045A0A1W2PR82 267 aa19.53■□□□□ 0.72
SNHG4-208ENST00000514110 CLTCQ00610 1675 aaKnown RBP19.52■□□□□ 0.72
SNHG4-208ENST00000514110 ADGBQ8N7X0 1667 aa19.52■□□□□ 0.72
SNHG4-208ENST00000514110 DMRT2Q9Y5R5 561 aa19.52■□□□□ 0.72
SNHG4-208ENST00000514110 NPATQ14207 1427 aa19.51■□□□□ 0.71
SNHG4-208ENST00000514110 GGT6Q6P531 493 aa19.5■□□□□ 0.71
SNHG4-208ENST00000514110 RTEL1-TNFRSF6BF6WH68 1400 aa19.5■□□□□ 0.71
SNHG4-208ENST00000514110 CAMSAP2Q08AD1 1489 aa19.48■□□□□ 0.71
SNHG4-208ENST00000514110 PTPRTO14522 1441 aa19.47■□□□□ 0.71
SNHG4-208ENST00000514110 VPS8Q8N3P4 1428 aa19.47■□□□□ 0.71
SNHG4-208ENST00000514110 CCDC141Q6ZP82 1450 aa19.47■□□□□ 0.71
SNHG4-208ENST00000514110 NCOA1Q15788 1441 aa19.46■□□□□ 0.71
SNHG4-208ENST00000514110 DHX29Q7Z478 1369 aaKnown RBP19.45■□□□□ 0.7
SNHG4-208ENST00000514110 PTPRKQ15262 1439 aa19.44■□□□□ 0.7
SNHG4-208ENST00000514110 LRRC9Q6ZRR7 1453 aa19.44■□□□□ 0.7
SNHG4-208ENST00000514110 PPP6R1Q9UPN7 881 aa19.44■□□□□ 0.7
SNHG4-208ENST00000514110 CAMSAP1Q5T5Y3 1602 aa19.43■□□□□ 0.7
SNHG4-208ENST00000514110 MYO3AQ8NEV4 1616 aa19.43■□□□□ 0.7
SNHG4-208ENST00000514110 ZNF142P52746 1687 aaPredicted RBP19.4■□□□□ 0.7
SNHG4-208ENST00000514110 RSPH4AQ5TD94 716 aa19.4■□□□□ 0.7
SNHG4-208ENST00000514110 ARHGEF5Q12774 1597 aa19.4■□□□□ 0.7
SNHG4-208ENST00000514110 KIF3BO15066 747 aa19.39■□□□□ 0.69
SNHG4-208ENST00000514110 KANK4Q5T7N3 995 aaPredicted RBP19.39■□□□□ 0.69
SNHG4-208ENST00000514110 CEP170BQ9Y4F5 1589 aaPredicted RBP19.39■□□□□ 0.69
SNHG4-208ENST00000514110 LTBP4Q8N2S1 1624 aa19.37■□□□□ 0.69
SNHG4-208ENST00000514110 NCKAP5LQ9HCH0 1330 aa19.37■□□□□ 0.69
SNHG4-208ENST00000514110 MAP3K1Q13233 1512 aa19.36■□□□□ 0.69
SNHG4-208ENST00000514110 TSPY4P0CV99 314 aa19.34■□□□□ 0.69
SNHG4-208ENST00000514110 TSPY10P0CW01 314 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms