RNA–Protein interactions for RNA: ENST00000513870.1

HMGN1P15-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 15, humanhuman

BASIC

Gene HMGN1P15, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P15-201ENST00000513870 TMC2Q8TDI7 906 aa13.56□□□□□ -0.24
HMGN1P15-201ENST00000513870 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.56□□□□□ -0.24
HMGN1P15-201ENST00000513870 PDE4AP27815 886 aa13.55□□□□□ -0.24
HMGN1P15-201ENST00000513870 LARP6Q9BRS8 491 aaKnown RBP13.54□□□□□ -0.24
HMGN1P15-201ENST00000513870 CRISPLD2Q9H0B8 497 aa13.54□□□□□ -0.24
HMGN1P15-201ENST00000513870 SCUBE2Q9NQ36 999 aa13.54□□□□□ -0.24
HMGN1P15-201ENST00000513870 MAMSTRQ6ZN01 415 aa13.52□□□□□ -0.25
HMGN1P15-201ENST00000513870 WDR70Q9NW82 654 aa13.52□□□□□ -0.25
HMGN1P15-201ENST00000513870 C2orf72A6NCS6 295 aa13.51□□□□□ -0.25
HMGN1P15-201ENST00000513870 TMEM92Q6UXU6 159 aa13.51□□□□□ -0.25
HMGN1P15-201ENST00000513870 GPHNQ9NQX3 736 aaPredicted RBP13.51□□□□□ -0.25
HMGN1P15-201ENST00000513870 LHX8Q68G74 356 aa13.5□□□□□ -0.25
HMGN1P15-201ENST00000513870 DDX27Q96GQ7 796 aaKnown RBP13.48□□□□□ -0.25
HMGN1P15-201ENST00000513870 KIF3CO14782 793 aa13.46□□□□□ -0.25
HMGN1P15-201ENST00000513870 MFSD10Q14728 455 aa13.46□□□□□ -0.25
HMGN1P15-201ENST00000513870 SLAIN1Q8ND83 568 aa13.45□□□□□ -0.26
HMGN1P15-201ENST00000513870 DSG2Q14126 1118 aa13.44□□□□□ -0.26
HMGN1P15-201ENST00000513870 PPP1R15BQ5SWA1 713 aa13.44□□□□□ -0.26
HMGN1P15-201ENST00000513870 FOXK1P85037 733 aa13.42□□□□□ -0.26
HMGN1P15-201ENST00000513870 PLPP6Q8IY26 295 aa13.4□□□□□ -0.26
HMGN1P15-201ENST00000513870 OTUD5Q96G74 571 aa13.4□□□□□ -0.26
HMGN1P15-201ENST00000513870 E2F4Q16254 413 aa13.37□□□□□ -0.27
HMGN1P15-201ENST00000513870 P3H3Q8IVL6 736 aa13.32□□□□□ -0.28
HMGN1P15-201ENST00000513870 KCNV2Q8TDN2 545 aa13.32□□□□□ -0.28
HMGN1P15-201ENST00000513870 CAMK2BQ13554 666 aa13.29□□□□□ -0.28
HMGN1P15-201ENST00000513870 UPF1Q92900 1129 aaKnown RBP eCLIP13.26□□□□□ -0.29
HMGN1P15-201ENST00000513870 EMILIN3Q9NT22 766 aa13.25□□□□□ -0.29
HMGN1P15-201ENST00000513870 DOK7Q18PE1 504 aa13.23□□□□□ -0.29
HMGN1P15-201ENST00000513870 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
HMGN1P15-201ENST00000513870 SNPHO15079 494 aa13.21□□□□□ -0.29
HMGN1P15-201ENST00000513870 HOXB3P14651 431 aaPredicted RBP13.21□□□□□ -0.29
HMGN1P15-201ENST00000513870 DPYSL4O14531 572 aa13.2□□□□□ -0.3
HMGN1P15-201ENST00000513870 SLC34A2O95436 690 aa13.2□□□□□ -0.3
HMGN1P15-201ENST00000513870 RIMBP2O15034 1052 aa13.19□□□□□ -0.3
HMGN1P15-201ENST00000513870 OXER1Q8TDS5 423 aa13.19□□□□□ -0.3
HMGN1P15-201ENST00000513870 MAP3K9P80192 1104 aa13.18□□□□□ -0.3
HMGN1P15-201ENST00000513870 ZNF710Q8N1W2 664 aa13.18□□□□□ -0.3
HMGN1P15-201ENST00000513870 PTCD2Q8WV60 388 aaKnown RBP13.18□□□□□ -0.3
HMGN1P15-201ENST00000513870 TBC1D12O60347 775 aa13.17□□□□□ -0.3
HMGN1P15-201ENST00000513870 NBR1Q14596 966 aa13.16□□□□□ -0.3
HMGN1P15-201ENST00000513870 ARIH1Q9Y4X5 557 aaPredicted RBP13.16□□□□□ -0.3
HMGN1P15-201ENST00000513870 PCDHGA4Q9Y5G9 962 aa13.15□□□□□ -0.3
HMGN1P15-201ENST00000513870 ARSIQ5FYB1 569 aa13.11□□□□□ -0.31
HMGN1P15-201ENST00000513870 ZSWIM6Q9HCJ5 1215 aa13.11□□□□□ -0.31
HMGN1P15-201ENST00000513870 ZNF316A6NFI3 1004 aaPredicted RBP13.1□□□□□ -0.31
HMGN1P15-201ENST00000513870 BCANQ96GW7 911 aa13.1□□□□□ -0.31
HMGN1P15-201ENST00000513870 EVI5O60447 810 aa13.09□□□□□ -0.31
HMGN1P15-201ENST00000513870 KHSRPQ92945 711 aaKnown RBP eCLIP13.09□□□□□ -0.31
HMGN1P15-201ENST00000513870 SPDYE16A6NNV3 312 aaPredicted RBP13.08□□□□□ -0.32
HMGN1P15-201ENST00000513870 PDIA6Q15084 440 aa13.08□□□□□ -0.32
HMGN1P15-201ENST00000513870 GPR153Q6NV75 609 aa13.07□□□□□ -0.32
HMGN1P15-201ENST00000513870 NUDT7P0C024 238 aa13.06□□□□□ -0.32
HMGN1P15-201ENST00000513870 SEMA3EO15041 775 aa13.05□□□□□ -0.32
HMGN1P15-201ENST00000513870 FAM163AQ96GL9 167 aaPredicted RBP13.04□□□□□ -0.32
HMGN1P15-201ENST00000513870 ST18O60284 1047 aa13.02□□□□□ -0.33
HMGN1P15-201ENST00000513870 HOXB1P14653 301 aaPredicted RBP13.02□□□□□ -0.33
HMGN1P15-201ENST00000513870 KDM4FA0A1W2PPD8 638 aa12.98□□□□□ -0.33
HMGN1P15-201ENST00000513870 DDX12PQ92771 950 aa12.98□□□□□ -0.33
HMGN1P15-201ENST00000513870 ANO8Q9HCE9 1232 aaPredicted RBP12.98□□□□□ -0.33
HMGN1P15-201ENST00000513870 TESPA1A2RU30 521 aaPredicted RBP12.97□□□□□ -0.33
HMGN1P15-201ENST00000513870 MLLT3P42568 568 aaPredicted RBP12.97□□□□□ -0.33
HMGN1P15-201ENST00000513870 GRXCR2A6NFK2 248 aa12.96□□□□□ -0.33
HMGN1P15-201ENST00000513870 MARVELD3Q96A59 401 aa12.94□□□□□ -0.34
HMGN1P15-201ENST00000513870 LHX6Q9UPM6 363 aa12.94□□□□□ -0.34
HMGN1P15-201ENST00000513870 TULP1O00294 542 aaPredicted RBP12.93□□□□□ -0.34
HMGN1P15-201ENST00000513870 PTGER2P43116 358 aa12.93□□□□□ -0.34
HMGN1P15-201ENST00000513870 SMYD5Q6GMV2 418 aa12.93□□□□□ -0.34
HMGN1P15-201ENST00000513870 EMP3P54852 163 aa12.92□□□□□ -0.34
HMGN1P15-201ENST00000513870 ZNF454Q8N9F8 522 aa12.9□□□□□ -0.34
HMGN1P15-201ENST00000513870 ERBB3P21860 1342 aa12.89□□□□□ -0.35
HMGN1P15-201ENST00000513870 LCE2DQ5TA82 110 aaPredicted RBP12.89□□□□□ -0.35
HMGN1P15-201ENST00000513870 JPH4Q96JJ6 628 aa12.89□□□□□ -0.35
HMGN1P15-201ENST00000513870 PHF14O94880 888 aa12.88□□□□□ -0.35
HMGN1P15-201ENST00000513870 FOSBP53539 338 aa12.87□□□□□ -0.35
HMGN1P15-201ENST00000513870 PCDHGA10Q9Y5H3 936 aa12.87□□□□□ -0.35
HMGN1P15-201ENST00000513870 PSDA5PKW4 1024 aaPredicted RBP12.86□□□□□ -0.35
HMGN1P15-201ENST00000513870 EPAS1Q99814 870 aa12.86□□□□□ -0.35
HMGN1P15-201ENST00000513870 OSBPP22059 807 aa12.85□□□□□ -0.35
HMGN1P15-201ENST00000513870 TYW1BQ6NUM6 668 aa12.85□□□□□ -0.35
HMGN1P15-201ENST00000513870 FAM205CA6NFA0 338 aa12.84□□□□□ -0.35
HMGN1P15-201ENST00000513870 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
HMGN1P15-201ENST00000513870 VARS2Q5ST30 1063 aaKnown RBP12.84□□□□□ -0.35
HMGN1P15-201ENST00000513870 RBM33Q96EV2 1170 aaKnown RBP12.83□□□□□ -0.36
HMGN1P15-201ENST00000513870 RBM26Q5T8P6 1007 aaKnown RBP12.82□□□□□ -0.36
HMGN1P15-201ENST00000513870 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.82□□□□□ -0.36
HMGN1P15-201ENST00000513870 FBXW7Q969H0 707 aa12.82□□□□□ -0.36
HMGN1P15-201ENST00000513870 ZDHHC16Q969W1 377 aa12.82□□□□□ -0.36
HMGN1P15-201ENST00000513870 PRIM1P49642 420 aaKnown RBP12.81□□□□□ -0.36
HMGN1P15-201ENST00000513870 LMOD2Q6P5Q4 547 aa12.81□□□□□ -0.36
HMGN1P15-201ENST00000513870 MAP3K7O43318 606 aa12.8□□□□□ -0.36
HMGN1P15-201ENST00000513870 EN1Q05925 392 aaPredicted RBP12.79□□□□□ -0.36
HMGN1P15-201ENST00000513870 HS3ST6Q96QI5 342 aa12.78□□□□□ -0.36
HMGN1P15-201ENST00000513870 ADAM33Q9BZ11 813 aa12.78□□□□□ -0.36
HMGN1P15-201ENST00000513870 NUTM2FA1L443 756 aa12.76□□□□□ -0.37
HMGN1P15-201ENST00000513870 POTEB3A0JP26 581 aa12.74□□□□□ -0.37
HMGN1P15-201ENST00000513870 TSR1Q2NL82 804 aaKnown RBP12.74□□□□□ -0.37
HMGN1P15-201ENST00000513870 POTEBQ6S5H4 581 aa12.74□□□□□ -0.37
HMGN1P15-201ENST00000513870 GPIHBP1Q8IV16 184 aa12.74□□□□□ -0.37
HMGN1P15-201ENST00000513870 BCL2L12Q9HB09 334 aa12.73□□□□□ -0.37
HMGN1P15-201ENST00000513870 C6orf132Q5T0Z8 1188 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms