RNA–Protein interactions for RNA: ENST00000513861.5

PACRGL-229, Transcript of parkin coregulated like, human

TSL 4

Gene PACRGL, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACRGL-229	ENST00000513861	EFCAB2	Q5VUJ9	269 aa		33.52	■■■□□ 2.96
PACRGL-229	ENST00000513861	ZFYVE16	Q7Z3T8	1539 aa		33.52	■■■□□ 2.96
PACRGL-229	ENST00000513861	POGZ	Q7Z3K3	1410 aa		33.52	■■■□□ 2.96
PACRGL-229	ENST00000513861	PTPRM	P28827	1452 aa		33.51	■■■□□ 2.96
PACRGL-229	ENST00000513861	CCDC18	Q5T9S5	1454 aa		33.5	■■■□□ 2.95
PACRGL-229	ENST00000513861	MAGI2	Q86UL8	1455 aa		33.5	■■■□□ 2.95
PACRGL-229	ENST00000513861	MADD	Q8WXG6	1647 aa		33.5	■■■□□ 2.95
PACRGL-229	ENST00000513861	YEATS2	Q9ULM3	1422 aa		33.49	■■■□□ 2.95
PACRGL-229	ENST00000513861	ARHGAP5	Q13017	1502 aa		33.46	■■■□□ 2.95
PACRGL-229	ENST00000513861	FYCO1	Q9BQS8	1478 aa		33.44	■■■□□ 2.94
PACRGL-229	ENST00000513861	SIGLEC1	Q9BZZ2	1709 aa		33.42	■■■□□ 2.94
PACRGL-229	ENST00000513861	CDC42BPB	Q9Y5S2	1711 aa		33.39	■■■□□ 2.94
PACRGL-229	ENST00000513861	RIMS1	Q86UR5	1692 aa	Known RBP	33.38	■■■□□ 2.93
PACRGL-229	ENST00000513861	ZNF518A	Q6AHZ1	1483 aa		33.36	■■■□□ 2.93
PACRGL-229	ENST00000513861	PREX2	Q70Z35	1606 aa		33.35	■■■□□ 2.93
PACRGL-229	ENST00000513861	ATP10A	O60312	1499 aa		33.31	■■■□□ 2.92
PACRGL-229	ENST00000513861	KDM5C	P41229	1560 aa		33.31	■■■□□ 2.92
PACRGL-229	ENST00000513861	C9orf84	Q5VXU9	1444 aa		33.28	■■■□□ 2.92
PACRGL-229	ENST00000513861	AFAP1	Q8N556	730 aa		33.28	■■■□□ 2.92
PACRGL-229	ENST00000513861	CDC42BPA	Q5VT25	1732 aa		33.27	■■■□□ 2.92
PACRGL-229	ENST00000513861	MLEC	Q14165	292 aa		33.25	■■■□□ 2.91
PACRGL-229	ENST00000513861	ABCC1	P33527	1531 aa		33.24	■■■□□ 2.91
PACRGL-229	ENST00000513861	FER1L4	A9Z1Z3	1794 aa		33.24	■■■□□ 2.91
PACRGL-229	ENST00000513861	ITSN2	Q9NZM3	1697 aa		33.22	■■■□□ 2.91
PACRGL-229	ENST00000513861	ARHGEF12	Q9NZN5	1544 aa		33.2	■■■□□ 2.91
PACRGL-229	ENST00000513861	MYT1L	Q9UL68	1186 aa		33.2	■■■□□ 2.91
PACRGL-229	ENST00000513861	DIP2C	Q9Y2E4	1556 aa		33.18	■■■□□ 2.9
PACRGL-229	ENST00000513861	TRAPPC8	Q9Y2L5	1435 aa		33.18	■■■□□ 2.9
PACRGL-229	ENST00000513861	LMTK3	Q96Q04	1460 aa		33.18	■■■□□ 2.9
PACRGL-229	ENST00000513861	MLH3	Q9UHC1	1453 aa		33.17	■■■□□ 2.9
PACRGL-229	ENST00000513861	PLPPR3	Q6T4P5	718 aa		33.16	■■■□□ 2.9
PACRGL-229	ENST00000513861	ABCA6	Q8N139	1617 aa		33.14	■■■□□ 2.9
PACRGL-229	ENST00000513861	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.13	■■■□□ 2.89
PACRGL-229	ENST00000513861	RERE	Q9P2R6	1566 aa		33.13	■■■□□ 2.89
PACRGL-229	ENST00000513861	CEP162	Q5TB80	1403 aa		33.12	■■■□□ 2.89
PACRGL-229	ENST00000513861	ILDR1	Q86SU0	546 aa	Predicted RBP	33.11	■■■□□ 2.89
PACRGL-229	ENST00000513861	SAMD9L	Q8IVG5	1584 aa		33.11	■■■□□ 2.89
PACRGL-229	ENST00000513861	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.1	■■■□□ 2.89
PACRGL-229	ENST00000513861	MTUS2	Q5JR59	1369 aa		33.09	■■■□□ 2.89
PACRGL-229	ENST00000513861	KIDINS220	Q9ULH0	1771 aa		33.06	■■■□□ 2.88
PACRGL-229	ENST00000513861	SYCP2	Q9BX26	1530 aa		33.05	■■■□□ 2.88
PACRGL-229	ENST00000513861	CCNB3	Q8WWL7	1395 aa		33.04	■■■□□ 2.88
PACRGL-229	ENST00000513861	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.01	■■■□□ 2.87
PACRGL-229	ENST00000513861	AGL	P35573	1532 aa		33.01	■■■□□ 2.87
PACRGL-229	ENST00000513861	EHBP1L1	Q8N3D4	1523 aa		33	■■■□□ 2.87
PACRGL-229	ENST00000513861	HSPA2	P54652	639 aa		32.98	■■■□□ 2.87
PACRGL-229	ENST00000513861	PLEKHH2	Q8IVE3	1493 aa		32.98	■■■□□ 2.87
PACRGL-229	ENST00000513861	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.97	■■■□□ 2.87
PACRGL-229	ENST00000513861	KIAA1107	Q9UPP5	1409 aa		32.96	■■■□□ 2.87
PACRGL-229	ENST00000513861	CEBPA	P49715	358 aa	Predicted RBP	32.95	■■■□□ 2.87
PACRGL-229	ENST00000513861	TIAM1	Q13009	1591 aa		32.95	■■■□□ 2.86
PACRGL-229	ENST00000513861	SPAG9	O60271	1321 aa	Known RBP	32.94	■■■□□ 2.86
PACRGL-229	ENST00000513861	PREX1	Q8TCU6	1659 aa		32.93	■■■□□ 2.86
PACRGL-229	ENST00000513861	ATP7A	Q04656	1500 aa		32.9	■■■□□ 2.86
PACRGL-229	ENST00000513861	INO80	Q9ULG1	1556 aa	Predicted RBP	32.88	■■■□□ 2.85
PACRGL-229	ENST00000513861	C3	P01024	1663 aa		32.86	■■■□□ 2.85
PACRGL-229	ENST00000513861	LOC105371045	A0A1W2PR82	267 aa		32.86	■■■□□ 2.85
PACRGL-229	ENST00000513861	ESF1	Q9H501	851 aa	Known RBP	32.86	■■■□□ 2.85
PACRGL-229	ENST00000513861	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.82	■■■□□ 2.85
PACRGL-229	ENST00000513861	ZNF644	Q9H582	1327 aa	Predicted RBP	32.82	■■■□□ 2.84
PACRGL-229	ENST00000513861	SETD1B	Q9UPS6	1966 aa	Known RBP	32.79	■■■□□ 2.84
PACRGL-229	ENST00000513861	CNTLN	Q9NXG0	1405 aa		32.79	■■■□□ 2.84
PACRGL-229	ENST00000513861	PLXNC1	O60486	1568 aa		32.79	■■■□□ 2.84
PACRGL-229	ENST00000513861	UHRF1BP1	Q6BDS2	1440 aa		32.78	■■■□□ 2.84
PACRGL-229	ENST00000513861	NCOA2	Q15596	1464 aa		32.78	■■■□□ 2.84
PACRGL-229	ENST00000513861	MBD5	Q9P267	1494 aa		32.78	■■■□□ 2.84
PACRGL-229	ENST00000513861	VPS8	Q8N3P4	1428 aa		32.77	■■■□□ 2.84
PACRGL-229	ENST00000513861	A2M	P01023	1474 aa		32.77	■■■□□ 2.84
PACRGL-229	ENST00000513861	ADGB	Q8N7X0	1667 aa		32.74	■■■□□ 2.83
PACRGL-229	ENST00000513861	MROH2A	A6NES4	1674 aa		32.73	■■■□□ 2.83
PACRGL-229	ENST00000513861	FBXO41	Q8TF61	875 aa		32.72	■■■□□ 2.83
PACRGL-229	ENST00000513861	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.68	■■■□□ 2.82
PACRGL-229	ENST00000513861	CAMSAP2	Q08AD1	1489 aa		32.68	■■■□□ 2.82
PACRGL-229	ENST00000513861	LRRC9	Q6ZRR7	1453 aa		32.67	■■■□□ 2.82
PACRGL-229	ENST00000513861	CLTC	Q00610	1675 aa	Known RBP	32.66	■■■□□ 2.82
PACRGL-229	ENST00000513861	STRC	Q7RTU9	1775 aa		32.65	■■■□□ 2.82
PACRGL-229	ENST00000513861	ZMYM3	Q14202	1370 aa		32.64	■■■□□ 2.82
PACRGL-229	ENST00000513861	CCDC141	Q6ZP82	1450 aa		32.64	■■■□□ 2.82
PACRGL-229	ENST00000513861	GGT6	Q6P531	493 aa		32.62	■■■□□ 2.81
PACRGL-229	ENST00000513861	NPAT	Q14207	1427 aa		32.61	■■■□□ 2.81
PACRGL-229	ENST00000513861	MAP3K1	Q13233	1512 aa		32.6	■■■□□ 2.81
PACRGL-229	ENST00000513861	RSPH4A	Q5TD94	716 aa		32.59	■■■□□ 2.81
PACRGL-229	ENST00000513861	DMRT2	Q9Y5R5	561 aa		32.58	■■■□□ 2.81
PACRGL-229	ENST00000513861	DHX29	Q7Z478	1369 aa	Known RBP	32.57	■■■□□ 2.8
PACRGL-229	ENST00000513861	ARHGEF5	Q12774	1597 aa		32.56	■■■□□ 2.8
PACRGL-229	ENST00000513861	PPP6R1	Q9UPN7	881 aa		32.55	■■■□□ 2.8
PACRGL-229	ENST00000513861	KANK4	Q5T7N3	995 aa	Predicted RBP	32.53	■■■□□ 2.8
PACRGL-229	ENST00000513861	CERK	Q8TCT0	537 aa		32.5	■■■□□ 2.79
PACRGL-229	ENST00000513861	PTPRK	Q15262	1439 aa		32.49	■■■□□ 2.79
PACRGL-229	ENST00000513861	TSPY4	P0CV99	314 aa		32.47	■■■□□ 2.79
PACRGL-229	ENST00000513861	TSPY10	P0CW01	314 aa		32.47	■■■□□ 2.79
PACRGL-229	ENST00000513861	MYO3A	Q8NEV4	1616 aa		32.47	■■■□□ 2.79
PACRGL-229	ENST00000513861	PTPRT	O14522	1441 aa		32.46	■■■□□ 2.79
PACRGL-229	ENST00000513861	NCOA1	Q15788	1441 aa		32.46	■■■□□ 2.79
PACRGL-229	ENST00000513861	KIF3B	O15066	747 aa		32.46	■■■□□ 2.79
PACRGL-229	ENST00000513861	MYOM3	Q5VTT5	1437 aa		32.44	■■■□□ 2.78
PACRGL-229	ENST00000513861	ZNF142	P52746	1687 aa	Predicted RBP	32.44	■■■□□ 2.78
PACRGL-229	ENST00000513861	CAMSAP1	Q5T5Y3	1602 aa		32.44	■■■□□ 2.78
PACRGL-229	ENST00000513861	MIA2	Q96PC5	1412 aa		32.43	■■■□□ 2.78
PACRGL-229	ENST00000513861	FAM135A	Q9P2D6	1515 aa		32.4	■■■□□ 2.78

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