RNA–Protein interactions for RNA: ENST00000513861.5

PACRGL-229, Transcript of parkin coregulated like, humanhuman

TSL 4

Gene PACRGL, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-229ENST00000513861 NISCHQ9Y2I1 1504 aa51.26■■■■■ 5.8
PACRGL-229ENST00000513861 CCDC180Q9P1Z9 1646 aa45.94■■■■■ 4.94
PACRGL-229ENST00000513861 ABCC9O60706 1549 aa45.67■■■■■ 4.9
PACRGL-229ENST00000513861 RB1CC1Q8TDY2 1594 aa43.6■■■■■ 4.57
PACRGL-229ENST00000513861 NACADO15069 1562 aa43.34■■■■■ 4.53
PACRGL-229ENST00000513861 DCAF8L2P0C7V8 631 aa43.14■■■■■ 4.5
PACRGL-229ENST00000513861 MYO15BQ96JP2 1530 aa42.82■■■■■ 4.45
PACRGL-229ENST00000513861 UNC13AQ9UPW8 1703 aa42.64■■■■■ 4.42
PACRGL-229ENST00000513861 DNAJC5BQ9UF47 199 aa42.6■■■■■ 4.41
PACRGL-229ENST00000513861 ZCCHC6Q5VYS8 1495 aaKnown RBP42.54■■■■■ 4.4
PACRGL-229ENST00000513861 PABPN1Q86U42 306 aaKnown RBP eCLIP42.53■■■■■ 4.4
PACRGL-229ENST00000513861 DCAF1Q9Y4B6 1507 aa42.36■■■■■ 4.37
PACRGL-229ENST00000513861 BICRAQ9NZM4 1560 aa42.31■■■■■ 4.36
PACRGL-229ENST00000513861 SCRIBQ14160 1630 aa41.86■■■■■ 4.29
PACRGL-229ENST00000513861 SHROOM4Q9ULL8 1493 aa41.77■■■■■ 4.28
PACRGL-229ENST00000513861 CC2D2AQ9P2K1 1620 aa41.28■■■■■ 4.2
PACRGL-229ENST00000513861 EIF4G1Q04637 1599 aaKnown RBP41.25■■■■■ 4.19
PACRGL-229ENST00000513861 CECR2Q9BXF3 1484 aa41.11■■■■■ 4.17
PACRGL-229ENST00000513861 NCAPD3P42695 1498 aa40■■■■□ 3.99
PACRGL-229ENST00000513861 SMARCA4P51532 1647 aa39.95■■■■□ 3.99
PACRGL-229ENST00000513861 ATAD2BQ9ULI0 1458 aa39.91■■■■□ 3.98
PACRGL-229ENST00000513861 SMARCA2P51531 1590 aa39.84■■■■□ 3.97
PACRGL-229ENST00000513861 BAZ1AQ9NRL2 1556 aaPredicted RBP39.79■■■■□ 3.96
PACRGL-229ENST00000513861 HMGXB3Q12766 1538 aa39.75■■■■□ 3.95
PACRGL-229ENST00000513861 PEG3Q9GZU2 1588 aa39.56■■■■□ 3.92
PACRGL-229ENST00000513861 BAZ1BQ9UIG0 1483 aaKnown RBP39.56■■■■□ 3.92
PACRGL-229ENST00000513861 MROH2BQ7Z745 1585 aa39.5■■■■□ 3.91
PACRGL-229ENST00000513861 ERCC6Q03468 1493 aa39.43■■■■□ 3.9
PACRGL-229ENST00000513861 NESP48681 1621 aa39.3■■■■□ 3.88
PACRGL-229ENST00000513861 CUX2O14529 1486 aa39.27■■■■□ 3.88
PACRGL-229ENST00000513861 LAMC3Q9Y6N6 1575 aa39.09■■■■□ 3.85
PACRGL-229ENST00000513861 WIZO95785 1651 aa39.06■■■■□ 3.84
PACRGL-229ENST00000513861 DNAJC5Q9H3Z4 198 aa38.95■■■■□ 3.83
PACRGL-229ENST00000513861 THOC2Q8NI27 1593 aaKnown RBP38.88■■■■□ 3.81
PACRGL-229ENST00000513861 KIF21AQ7Z4S6 1674 aa38.84■■■■□ 3.81
PACRGL-229ENST00000513861 PDS5BQ9NTI5 1447 aa38.83■■■■□ 3.81
PACRGL-229ENST00000513861 CADPSQ9ULU8 1353 aa38.79■■■■□ 3.8
PACRGL-229ENST00000513861 RSF1Q96T23 1441 aaPredicted RBP38.76■■■■□ 3.8
PACRGL-229ENST00000513861 TOP2AP11388 1531 aaKnown RBP38.58■■■■□ 3.77
PACRGL-229ENST00000513861 MRC2Q9UBG0 1479 aa38.49■■■■□ 3.75
PACRGL-229ENST00000513861 CFTRP13569 1480 aa38.41■■■■□ 3.74
PACRGL-229ENST00000513861 WDR62O43379 1518 aa38.39■■■■□ 3.74
PACRGL-229ENST00000513861 CEP164Q9UPV0 1460 aa38.39■■■■□ 3.74
PACRGL-229ENST00000513861 FANCD2Q9BXW9 1451 aa38.36■■■■□ 3.73
PACRGL-229ENST00000513861 CCDC88BA6NC98 1476 aa38.12■■■■□ 3.69
PACRGL-229ENST00000513861 PRDM2Q13029 1718 aa38.1■■■■□ 3.69
PACRGL-229ENST00000513861 URB2Q14146 1524 aaKnown RBP38.03■■■■□ 3.68
PACRGL-229ENST00000513861 TOPBP1Q92547 1522 aa37.66■■■■□ 3.62
PACRGL-229ENST00000513861 IFT140Q96RY7 1462 aa37.61■■■■□ 3.61
PACRGL-229ENST00000513861 ABCC8Q09428 1581 aa37.6■■■■□ 3.61
PACRGL-229ENST00000513861 DNMBPQ6XZF7 1577 aa37.56■■■■□ 3.6
PACRGL-229ENST00000513861 ZNF608Q9ULD9 1512 aaPredicted RBP37.51■■■■□ 3.6
PACRGL-229ENST00000513861 OSCARQ8IYS5 282 aa37.5■■■■□ 3.59
PACRGL-229ENST00000513861 EIF4G3O43432 1585 aaKnown RBP37.35■■■■□ 3.57
PACRGL-229ENST00000513861 TRIM41Q8WV44 630 aa37.35■■■■□ 3.57
PACRGL-229ENST00000513861 TARBP1Q13395 1621 aaKnown RBP37.32■■■■□ 3.57
PACRGL-229ENST00000513861 POLA1P09884 1462 aaPredicted RBP37.29■■■■□ 3.56
PACRGL-229ENST00000513861 SUPT5HO00267 1087 aaKnown RBP37.21■■■■□ 3.55
PACRGL-229ENST00000513861 AQRO60306 1485 aaKnown RBP eCLIP37.2■■■■□ 3.55
PACRGL-229ENST00000513861 RAD54L2Q9Y4B4 1467 aa37.14■■■■□ 3.54
PACRGL-229ENST00000513861 SOGA1O94964 1423 aa37.12■■■■□ 3.53
PACRGL-229ENST00000513861 FGD5Q6ZNL6 1462 aa37.1■■■■□ 3.53
PACRGL-229ENST00000513861 CUX1P39880 1505 aa37.1■■■■□ 3.53
PACRGL-229ENST00000513861 CHD1O14646 1710 aa37.05■■■■□ 3.52
PACRGL-229ENST00000513861 RIMBP3CA6NJZ7 1639 aa37.02■■■■□ 3.52
PACRGL-229ENST00000513861 RIMBP3BA6NNM3 1639 aa37.02■■■■□ 3.52
PACRGL-229ENST00000513861 RIMBP3Q9UFD9 1639 aa37.02■■■■□ 3.52
PACRGL-229ENST00000513861 TDRD9Q8NDG6 1382 aaKnown RBP37.01■■■■□ 3.51
PACRGL-229ENST00000513861 WDR97A6NE52 1622 aa36.97■■■■□ 3.51
PACRGL-229ENST00000513861 ARHGEF11O15085 1522 aa36.91■■■■□ 3.5
PACRGL-229ENST00000513861 FBLN2P98095 1184 aa36.91■■■■□ 3.5
PACRGL-229ENST00000513861 SNAPC4Q5SXM2 1469 aa36.85■■■■□ 3.49
PACRGL-229ENST00000513861 GRIN2BQ13224 1484 aa36.78■■■■□ 3.48
PACRGL-229ENST00000513861 MAGI1Q96QZ7 1491 aaPredicted RBP36.76■■■■□ 3.48
PACRGL-229ENST00000513861 ABCA10Q8WWZ4 1543 aa36.69■■■■□ 3.46
PACRGL-229ENST00000513861 PBRM1Q86U86 1689 aa36.69■■■■□ 3.46
PACRGL-229ENST00000513861 GAPVD1Q14C86 1478 aa36.69■■■■□ 3.46
PACRGL-229ENST00000513861 CHMP7Q8WUX9 453 aaPredicted RBP36.68■■■■□ 3.46
PACRGL-229ENST00000513861 ABCA5Q8WWZ7 1642 aa36.63■■■■□ 3.45
PACRGL-229ENST00000513861 SYNJ2O15056 1496 aa36.63■■■■□ 3.45
PACRGL-229ENST00000513861 SYNJ1O43426 1573 aa36.61■■■■□ 3.45
PACRGL-229ENST00000513861 CLASP1Q7Z460 1538 aa36.6■■■■□ 3.45
PACRGL-229ENST00000513861 CYB5RLQ6IPT4 315 aa36.6■■■■□ 3.45
PACRGL-229ENST00000513861 BIVM-ERCC5R4GMW8 1640 aa36.59■■■■□ 3.45
PACRGL-229ENST00000513861 TOP2BQ02880 1626 aa36.59■■■■□ 3.45
PACRGL-229ENST00000513861 WRNQ14191 1432 aaPredicted RBP eCLIP36.59■■■■□ 3.45
PACRGL-229ENST00000513861 ARAP1Q96P48 1450 aa36.56■■■■□ 3.44
PACRGL-229ENST00000513861 ADAMTS12P58397 1594 aa36.33■■■■□ 3.41
PACRGL-229ENST00000513861 GRIN2AQ12879 1464 aa36.31■■■■□ 3.4
PACRGL-229ENST00000513861 ERICH3Q5RHP9 1530 aa36.24■■■■□ 3.39
PACRGL-229ENST00000513861 FHAD1B1AJZ9 1412 aa36.23■■■■□ 3.39
PACRGL-229ENST00000513861 CEP170Q5SW79 1584 aa36.18■■■■□ 3.38
PACRGL-229ENST00000513861 NUP160Q12769 1436 aa36.17■■■■□ 3.38
PACRGL-229ENST00000513861 TRHP20396 242 aaPredicted RBP36.14■■■■□ 3.38
PACRGL-229ENST00000513861 ERCC6L2Q5T890 1561 aa36.05■■■■□ 3.36
PACRGL-229ENST00000513861 SHROOM2Q13796 1616 aa36.01■■■■□ 3.36
PACRGL-229ENST00000513861 KIF27Q86VH2 1401 aa35.86■■■■□ 3.33
PACRGL-229ENST00000513861 RUSC2Q8N2Y8 1516 aa35.83■■■■□ 3.33
PACRGL-229ENST00000513861 PRG4Q92954 1404 aaPredicted RBP35.81■■■■□ 3.32
PACRGL-229ENST00000513861 IGF1RP08069 1367 aa35.8■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms