RNA–Protein interactions for RNA: ENST00000512700.1

NSD2-222, Transcript of nuclear receptor binding SET domain protein 2, human

TSL 5

Gene NSD2, Length 1,095 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSD2-222	ENST00000512700	MAGI2	Q86UL8	1455 aa		19.17	■□□□□ 0.66
NSD2-222	ENST00000512700	MLEC	Q14165	292 aa		19.17	■□□□□ 0.66
NSD2-222	ENST00000512700	MYO5C	Q9NQX4	1742 aa		19.17	■□□□□ 0.66
NSD2-222	ENST00000512700	PLPPR3	Q6T4P5	718 aa		19.16	■□□□□ 0.66
NSD2-222	ENST00000512700	FYCO1	Q9BQS8	1478 aa		19.16	■□□□□ 0.66
NSD2-222	ENST00000512700	ZFYVE16	Q7Z3T8	1539 aa		19.15	■□□□□ 0.66
NSD2-222	ENST00000512700	PCF11	O94913	1555 aa	Known RBP	19.15	■□□□□ 0.66
NSD2-222	ENST00000512700	ARHGEF40	Q8TER5	1519 aa		19.15	■□□□□ 0.66
NSD2-222	ENST00000512700	AFAP1	Q8N556	730 aa		19.14	■□□□□ 0.65
NSD2-222	ENST00000512700	YEATS2	Q9ULM3	1422 aa		19.14	■□□□□ 0.65
NSD2-222	ENST00000512700	PTPRM	P28827	1452 aa		19.14	■□□□□ 0.65
NSD2-222	ENST00000512700	ZNF777	Q9ULD5	760 aa	Predicted RBP	19.13	■□□□□ 0.65
NSD2-222	ENST00000512700	HECW2	Q9P2P5	1572 aa		19.13	■□□□□ 0.65
NSD2-222	ENST00000512700	ZMYM4	Q5VZL5	1548 aa		19.12	■□□□□ 0.65
NSD2-222	ENST00000512700	BCORL1	Q5H9F3	1711 aa		19.11	■□□□□ 0.65
NSD2-222	ENST00000512700	LRRIQ1	Q96JM4	1722 aa		19.11	■□□□□ 0.65
NSD2-222	ENST00000512700	ADAMTSL3	P82987	1691 aa		19.11	■□□□□ 0.65
NSD2-222	ENST00000512700	ZNF518A	Q6AHZ1	1483 aa		19.1	■□□□□ 0.65
NSD2-222	ENST00000512700	ATP10A	O60312	1499 aa		19.09	■□□□□ 0.65
NSD2-222	ENST00000512700	MTUS2	Q5JR59	1369 aa		19.07	■□□□□ 0.64
NSD2-222	ENST00000512700	C9orf84	Q5VXU9	1444 aa		19.06	■□□□□ 0.64
NSD2-222	ENST00000512700	MADD	Q8WXG6	1647 aa		19.05	■□□□□ 0.64
NSD2-222	ENST00000512700	CFDP1	Q9UEE9	299 aa	Predicted RBP	19.05	■□□□□ 0.64
NSD2-222	ENST00000512700	CEP162	Q5TB80	1403 aa		19.04	■□□□□ 0.64
NSD2-222	ENST00000512700	ESF1	Q9H501	851 aa	Known RBP	19.03	■□□□□ 0.64
NSD2-222	ENST00000512700	CCNB3	Q8WWL7	1395 aa		19.03	■□□□□ 0.64
NSD2-222	ENST00000512700	LOC105371045	A0A1W2PR82	267 aa		19.02	■□□□□ 0.64
NSD2-222	ENST00000512700	CDC42BPB	Q9Y5S2	1711 aa		19.02	■□□□□ 0.63
NSD2-222	ENST00000512700	HNRNPM	P52272	730 aa	Known RBP eCLIP	19.01	■□□□□ 0.63	1e-7	■■■■■ 27.5
NSD2-222	ENST00000512700	RIMS1	Q86UR5	1692 aa	Known RBP	19.01	■□□□□ 0.63
NSD2-222	ENST00000512700	TRAPPC8	Q9Y2L5	1435 aa		19	■□□□□ 0.63
NSD2-222	ENST00000512700	PREX2	Q70Z35	1606 aa		19	■□□□□ 0.63
NSD2-222	ENST00000512700	GPATCH8	Q9UKJ3	1502 aa	Known RBP	18.98	■□□□□ 0.63
NSD2-222	ENST00000512700	SPAG9	O60271	1321 aa	Known RBP	18.98	■□□□□ 0.63
NSD2-222	ENST00000512700	MLH3	Q9UHC1	1453 aa		18.97	■□□□□ 0.63
NSD2-222	ENST00000512700	KDM5C	P41229	1560 aa		18.97	■□□□□ 0.63
NSD2-222	ENST00000512700	ABCC1	P33527	1531 aa		18.96	■□□□□ 0.63
NSD2-222	ENST00000512700	ARHGEF12	Q9NZN5	1544 aa		18.96	■□□□□ 0.63
NSD2-222	ENST00000512700	CDC42BPA	Q5VT25	1732 aa		18.94	■□□□□ 0.62
NSD2-222	ENST00000512700	CEBPA	P49715	358 aa	Predicted RBP	18.94	■□□□□ 0.62
NSD2-222	ENST00000512700	PLEKHH2	Q8IVE3	1493 aa		18.93	■□□□□ 0.62
NSD2-222	ENST00000512700	ILDR1	Q86SU0	546 aa	Predicted RBP	18.93	■□□□□ 0.62
NSD2-222	ENST00000512700	SIGLEC1	Q9BZZ2	1709 aa		18.93	■□□□□ 0.62
NSD2-222	ENST00000512700	HSPA2	P54652	639 aa		18.92	■□□□□ 0.62
NSD2-222	ENST00000512700	FER1L4	A9Z1Z3	1794 aa		18.91	■□□□□ 0.62
NSD2-222	ENST00000512700	ITSN2	Q9NZM3	1697 aa		18.91	■□□□□ 0.62
NSD2-222	ENST00000512700	KIAA1107	Q9UPP5	1409 aa		18.91	■□□□□ 0.62
NSD2-222	ENST00000512700	DIP2C	Q9Y2E4	1556 aa		18.9	■□□□□ 0.62
NSD2-222	ENST00000512700	LMTK3	Q96Q04	1460 aa		18.89	■□□□□ 0.61
NSD2-222	ENST00000512700	EHBP1L1	Q8N3D4	1523 aa		18.89	■□□□□ 0.61
NSD2-222	ENST00000512700	SYCP2	Q9BX26	1530 aa		18.89	■□□□□ 0.61
NSD2-222	ENST00000512700	SAMD9L	Q8IVG5	1584 aa		18.89	■□□□□ 0.61
NSD2-222	ENST00000512700	ZNF644	Q9H582	1327 aa	Predicted RBP	18.87	■□□□□ 0.61
NSD2-222	ENST00000512700	ABCA6	Q8N139	1617 aa		18.86	■□□□□ 0.61
NSD2-222	ENST00000512700	RERE	Q9P2R6	1566 aa		18.86	■□□□□ 0.61
NSD2-222	ENST00000512700	AGL	P35573	1532 aa		18.84	■□□□□ 0.61
NSD2-222	ENST00000512700	APLP2	Q06481	763 aa		18.84	■□□□□ 0.61
NSD2-222	ENST00000512700	KIDINS220	Q9ULH0	1771 aa		18.83	■□□□□ 0.61
NSD2-222	ENST00000512700	RSPH4A	Q5TD94	716 aa		18.83	■□□□□ 0.6
NSD2-222	ENST00000512700	GGT6	Q6P531	493 aa		18.83	■□□□□ 0.6
NSD2-222	ENST00000512700	VPS8	Q8N3P4	1428 aa		18.83	■□□□□ 0.6
NSD2-222	ENST00000512700	TIAM1	Q13009	1591 aa		18.81	■□□□□ 0.6
NSD2-222	ENST00000512700	UHRF1BP1	Q6BDS2	1440 aa		18.8	■□□□□ 0.6
NSD2-222	ENST00000512700	CNTLN	Q9NXG0	1405 aa		18.8	■□□□□ 0.6
NSD2-222	ENST00000512700	ATP7A	Q04656	1500 aa		18.79	■□□□□ 0.6
NSD2-222	ENST00000512700	NCOA2	Q15596	1464 aa		18.79	■□□□□ 0.6
NSD2-222	ENST00000512700	TSPY4	P0CV99	314 aa		18.79	■□□□□ 0.6
NSD2-222	ENST00000512700	TSPY10	P0CW01	314 aa		18.79	■□□□□ 0.6
NSD2-222	ENST00000512700	A2M	P01023	1474 aa		18.78	■□□□□ 0.6
NSD2-222	ENST00000512700	SUPT6H	Q7KZ85	1726 aa	Known RBP	18.78	■□□□□ 0.6
NSD2-222	ENST00000512700	DMRT2	Q9Y5R5	561 aa		18.78	■□□□□ 0.6
NSD2-222	ENST00000512700	FBXO41	Q8TF61	875 aa		18.75	■□□□□ 0.59
NSD2-222	ENST00000512700	PPP6R1	Q9UPN7	881 aa		18.75	■□□□□ 0.59
NSD2-222	ENST00000512700	ZMYM3	Q14202	1370 aa		18.75	■□□□□ 0.59
NSD2-222	ENST00000512700	SETD1B	Q9UPS6	1966 aa	Known RBP	18.75	■□□□□ 0.59
NSD2-222	ENST00000512700	RTEL1-TNFRSF6B	F6WH68	1400 aa		18.74	■□□□□ 0.59
NSD2-222	ENST00000512700	LRRC9	Q6ZRR7	1453 aa		18.74	■□□□□ 0.59
NSD2-222	ENST00000512700	MBD5	Q9P267	1494 aa		18.74	■□□□□ 0.59
NSD2-222	ENST00000512700	KANK4	Q5T7N3	995 aa	Predicted RBP	18.74	■□□□□ 0.59
NSD2-222	ENST00000512700	PREX1	Q8TCU6	1659 aa		18.73	■□□□□ 0.59
NSD2-222	ENST00000512700	KIF3B	O15066	747 aa		18.72	■□□□□ 0.59
NSD2-222	ENST00000512700	INO80	Q9ULG1	1556 aa	Predicted RBP	18.72	■□□□□ 0.59
NSD2-222	ENST00000512700	CAMSAP2	Q08AD1	1489 aa		18.71	■□□□□ 0.59
NSD2-222	ENST00000512700	CCDC141	Q6ZP82	1450 aa		18.71	■□□□□ 0.59
NSD2-222	ENST00000512700	DHX29	Q7Z478	1369 aa	Known RBP	18.71	■□□□□ 0.59
NSD2-222	ENST00000512700	C3	P01024	1663 aa		18.7	■□□□□ 0.58
NSD2-222	ENST00000512700	MAP3K1	Q13233	1512 aa		18.68	■□□□□ 0.58
NSD2-222	ENST00000512700	ADGB	Q8N7X0	1667 aa		18.67	■□□□□ 0.58
NSD2-222	ENST00000512700	NPAT	Q14207	1427 aa		18.66	■□□□□ 0.58
NSD2-222	ENST00000512700	PLXNC1	O60486	1568 aa		18.65	■□□□□ 0.58
NSD2-222	ENST00000512700	CERK	Q8TCT0	537 aa		18.65	■□□□□ 0.58
NSD2-222	ENST00000512700	WASHC2C	Q9Y4E1	1318 aa		18.65	■□□□□ 0.58
NSD2-222	ENST00000512700	MROH2A	A6NES4	1674 aa		18.63	■□□□□ 0.57
NSD2-222	ENST00000512700	MYOM3	Q5VTT5	1437 aa		18.62	■□□□□ 0.57
NSD2-222	ENST00000512700	MIA2	Q96PC5	1412 aa		18.62	■□□□□ 0.57
NSD2-222	ENST00000512700	CLTC	Q00610	1675 aa	Known RBP	18.62	■□□□□ 0.57
NSD2-222	ENST00000512700	ARHGEF5	Q12774	1597 aa		18.6	■□□□□ 0.57
NSD2-222	ENST00000512700	PTPRK	Q15262	1439 aa		18.58	■□□□□ 0.57
NSD2-222	ENST00000512700	PTPRT	O14522	1441 aa		18.57	■□□□□ 0.56
NSD2-222	ENST00000512700	NCKAP5L	Q9HCH0	1330 aa		18.56	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms