RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 POGZQ7Z3K3 1410 aa24.08■■□□□ 1.44
CCHCR1-229ENST00000512418 MADDQ8WXG6 1647 aa24.07■■□□□ 1.44
CCHCR1-229ENST00000512418 SCAPERQ9BY12 1400 aa24.07■■□□□ 1.44
CCHCR1-229ENST00000512418 PCF11O94913 1555 aaKnown RBP24.04■■□□□ 1.44
CCHCR1-229ENST00000512418 YEATS2Q9ULM3 1422 aa24.04■■□□□ 1.44
CCHCR1-229ENST00000512418 EFCAB2Q5VUJ9 269 aa24.04■■□□□ 1.44
CCHCR1-229ENST00000512418 CASKIN1Q8WXD9 1431 aa24.03■■□□□ 1.44
CCHCR1-229ENST00000512418 CCDC18Q5T9S5 1454 aa24.03■■□□□ 1.44
CCHCR1-229ENST00000512418 ARHGAP5Q13017 1502 aa24■■□□□ 1.43
CCHCR1-229ENST00000512418 RIMS1Q86UR5 1692 aaKnown RBP23.98■■□□□ 1.43
CCHCR1-229ENST00000512418 SIGLEC1Q9BZZ2 1709 aa23.98■■□□□ 1.43
CCHCR1-229ENST00000512418 ZNF518AQ6AHZ1 1483 aa23.96■■□□□ 1.43
CCHCR1-229ENST00000512418 FYCO1Q9BQS8 1478 aa23.96■■□□□ 1.43
CCHCR1-229ENST00000512418 ATP10AO60312 1499 aa23.93■■□□□ 1.42
CCHCR1-229ENST00000512418 CDC42BPBQ9Y5S2 1711 aa23.93■■□□□ 1.42
CCHCR1-229ENST00000512418 PREX2Q70Z35 1606 aa23.92■■□□□ 1.42
CCHCR1-229ENST00000512418 KDM5CP41229 1560 aa23.92■■□□□ 1.42
CCHCR1-229ENST00000512418 C9orf84Q5VXU9 1444 aa23.92■■□□□ 1.42
CCHCR1-229ENST00000512418 ILDR1Q86SU0 546 aaPredicted RBP23.89■■□□□ 1.41
CCHCR1-229ENST00000512418 LMTK3Q96Q04 1460 aa23.88■■□□□ 1.41
CCHCR1-229ENST00000512418 FER1L4A9Z1Z3 1794 aa23.88■■□□□ 1.41
CCHCR1-229ENST00000512418 AFAP1Q8N556 730 aa23.87■■□□□ 1.41
CCHCR1-229ENST00000512418 ABCC1P33527 1531 aa23.86■■□□□ 1.41
CCHCR1-229ENST00000512418 MLECQ14165 292 aa23.86■■□□□ 1.41
CCHCR1-229ENST00000512418 ARHGEF12Q9NZN5 1544 aa23.84■■□□□ 1.41
CCHCR1-229ENST00000512418 CDC42BPAQ5VT25 1732 aa23.84■■□□□ 1.41
CCHCR1-229ENST00000512418 DIP2CQ9Y2E4 1556 aa23.82■■□□□ 1.4
CCHCR1-229ENST00000512418 MLH3Q9UHC1 1453 aa23.82■■□□□ 1.4
CCHCR1-229ENST00000512418 ITSN2Q9NZM3 1697 aa23.82■■□□□ 1.4
CCHCR1-229ENST00000512418 REREQ9P2R6 1566 aa23.81■■□□□ 1.4
CCHCR1-229ENST00000512418 MYT1LQ9UL68 1186 aa23.8■■□□□ 1.4
CCHCR1-229ENST00000512418 TRAPPC8Q9Y2L5 1435 aa23.79■■□□□ 1.4
CCHCR1-229ENST00000512418 PLPPR3Q6T4P5 718 aa23.79■■□□□ 1.4
CCHCR1-229ENST00000512418 ABCA6Q8N139 1617 aa23.79■■□□□ 1.4
CCHCR1-229ENST00000512418 GPATCH8Q9UKJ3 1502 aaKnown RBP23.74■■□□□ 1.39
CCHCR1-229ENST00000512418 SAMD9LQ8IVG5 1584 aa23.74■■□□□ 1.39
CCHCR1-229ENST00000512418 AGLP35573 1532 aa23.72■■□□□ 1.39
CCHCR1-229ENST00000512418 KIDINS220Q9ULH0 1771 aa23.71■■□□□ 1.39
CCHCR1-229ENST00000512418 SYCP2Q9BX26 1530 aa23.7■■□□□ 1.38
CCHCR1-229ENST00000512418 MTUS2Q5JR59 1369 aa23.7■■□□□ 1.38
CCHCR1-229ENST00000512418 HSPA2P54652 639 aa23.7■■□□□ 1.38
CCHCR1-229ENST00000512418 ZNF777Q9ULD5 760 aaPredicted RBP23.69■■□□□ 1.38
CCHCR1-229ENST00000512418 CEP162Q5TB80 1403 aa23.68■■□□□ 1.38
CCHCR1-229ENST00000512418 CCNB3Q8WWL7 1395 aa23.67■■□□□ 1.38
CCHCR1-229ENST00000512418 PREX1Q8TCU6 1659 aa23.67■■□□□ 1.38
CCHCR1-229ENST00000512418 PLEKHH2Q8IVE3 1493 aa23.67■■□□□ 1.38
CCHCR1-229ENST00000512418 CFDP1Q9UEE9 299 aaPredicted RBP23.66■■□□□ 1.38
CCHCR1-229ENST00000512418 KIAA1107Q9UPP5 1409 aa23.66■■□□□ 1.38
CCHCR1-229ENST00000512418 EHBP1L1Q8N3D4 1523 aa23.65■■□□□ 1.38
CCHCR1-229ENST00000512418 CEBPAP49715 358 aaPredicted RBP23.65■■□□□ 1.38
CCHCR1-229ENST00000512418 SPAG9O60271 1321 aaKnown RBP23.62■■□□□ 1.37
CCHCR1-229ENST00000512418 HNRNPMP52272 730 aaKnown RBP eCLIP23.61■■□□□ 1.37
CCHCR1-229ENST00000512418 TIAM1Q13009 1591 aa23.61■■□□□ 1.37
CCHCR1-229ENST00000512418 ATP7AQ04656 1500 aa23.6■■□□□ 1.37
CCHCR1-229ENST00000512418 FBXO41Q8TF61 875 aa23.6■■□□□ 1.37
CCHCR1-229ENST00000512418 ESF1Q9H501 851 aaKnown RBP23.6■■□□□ 1.37
CCHCR1-229ENST00000512418 INO80Q9ULG1 1556 aaPredicted RBP23.6■■□□□ 1.37
CCHCR1-229ENST00000512418 C3P01024 1663 aa23.6■■□□□ 1.37
CCHCR1-229ENST00000512418 UHRF1BP1Q6BDS2 1440 aa23.59■■□□□ 1.37
CCHCR1-229ENST00000512418 CNTLNQ9NXG0 1405 aa23.58■■□□□ 1.36
CCHCR1-229ENST00000512418 SETD1BQ9UPS6 1966 aaKnown RBP23.58■■□□□ 1.36
CCHCR1-229ENST00000512418 PLXNC1O60486 1568 aa23.54■■□□□ 1.36
CCHCR1-229ENST00000512418 SUPT6HQ7KZ85 1726 aaKnown RBP23.53■■□□□ 1.36
CCHCR1-229ENST00000512418 A2MP01023 1474 aa23.52■■□□□ 1.36
CCHCR1-229ENST00000512418 MROH2AA6NES4 1674 aa23.51■■□□□ 1.35
CCHCR1-229ENST00000512418 MBD5Q9P267 1494 aa23.5■■□□□ 1.35
CCHCR1-229ENST00000512418 ZNF644Q9H582 1327 aaPredicted RBP23.5■■□□□ 1.35
CCHCR1-229ENST00000512418 NCOA2Q15596 1464 aa23.48■■□□□ 1.35
CCHCR1-229ENST00000512418 ADGBQ8N7X0 1667 aa23.48■■□□□ 1.35
CCHCR1-229ENST00000512418 STRCQ7RTU9 1775 aa23.47■■□□□ 1.35
CCHCR1-229ENST00000512418 VPS8Q8N3P4 1428 aa23.46■■□□□ 1.35
CCHCR1-229ENST00000512418 RTEL1-TNFRSF6BF6WH68 1400 aa23.45■■□□□ 1.34
CCHCR1-229ENST00000512418 NPATQ14207 1427 aa23.45■■□□□ 1.34
CCHCR1-229ENST00000512418 DMRT2Q9Y5R5 561 aa23.45■■□□□ 1.34
CCHCR1-229ENST00000512418 ZMYM3Q14202 1370 aa23.43■■□□□ 1.34
CCHCR1-229ENST00000512418 CLTCQ00610 1675 aaKnown RBP23.42■■□□□ 1.34
CCHCR1-229ENST00000512418 CAMSAP2Q08AD1 1489 aa23.42■■□□□ 1.34
CCHCR1-229ENST00000512418 CCDC141Q6ZP82 1450 aa23.42■■□□□ 1.34
CCHCR1-229ENST00000512418 LOC105371045A0A1W2PR82 267 aa23.41■■□□□ 1.34
CCHCR1-229ENST00000512418 CERKQ8TCT0 537 aa23.4■■□□□ 1.34
CCHCR1-229ENST00000512418 GGT6Q6P531 493 aa23.39■■□□□ 1.33
CCHCR1-229ENST00000512418 LRRC9Q6ZRR7 1453 aa23.38■■□□□ 1.33
CCHCR1-229ENST00000512418 PPP6R1Q9UPN7 881 aa23.38■■□□□ 1.33
CCHCR1-229ENST00000512418 RSPH4AQ5TD94 716 aa23.37■■□□□ 1.33
CCHCR1-229ENST00000512418 DHX29Q7Z478 1369 aaKnown RBP23.37■■□□□ 1.33
CCHCR1-229ENST00000512418 PTPRTO14522 1441 aa23.36■■□□□ 1.33
CCHCR1-229ENST00000512418 NCOA1Q15788 1441 aa23.35■■□□□ 1.33
CCHCR1-229ENST00000512418 MAP3K1Q13233 1512 aa23.34■■□□□ 1.33
CCHCR1-229ENST00000512418 ARHGEF5Q12774 1597 aa23.34■■□□□ 1.33
CCHCR1-229ENST00000512418 PTPRKQ15262 1439 aa23.33■■□□□ 1.33
CCHCR1-229ENST00000512418 MYO3AQ8NEV4 1616 aa23.33■■□□□ 1.32
CCHCR1-229ENST00000512418 ZNF142P52746 1687 aaPredicted RBP23.32■■□□□ 1.32
CCHCR1-229ENST00000512418 CAMSAP1Q5T5Y3 1602 aa23.31■■□□□ 1.32
CCHCR1-229ENST00000512418 FAM135AQ9P2D6 1515 aa23.28■■□□□ 1.32
CCHCR1-229ENST00000512418 CEP170BQ9Y4F5 1589 aaPredicted RBP23.28■■□□□ 1.32
CCHCR1-229ENST00000512418 KIF3BO15066 747 aa23.27■■□□□ 1.32
CCHCR1-229ENST00000512418 TSPY4P0CV99 314 aa23.27■■□□□ 1.32
CCHCR1-229ENST00000512418 TSPY10P0CW01 314 aa23.27■■□□□ 1.32
CCHCR1-229ENST00000512418 KDM5DQ9BY66 1539 aa23.26■■□□□ 1.31
CCHCR1-229ENST00000512418 KANK4Q5T7N3 995 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms