RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 MED1Q15648 1581 aaPredicted RBP13.72□□□□□ -0.21
DEPDC1B-205ENST00000512078 ARID3CA6NKF2 412 aa13.71□□□□□ -0.21
DEPDC1B-205ENST00000512078 MLECQ14165 292 aa13.71□□□□□ -0.21
DEPDC1B-205ENST00000512078 HECW1Q76N89 1606 aa13.71□□□□□ -0.21
DEPDC1B-205ENST00000512078 RAPGEF6Q8TEU7 1601 aa13.69□□□□□ -0.22
DEPDC1B-205ENST00000512078 CEBPAP49715 358 aaPredicted RBP13.67□□□□□ -0.22
DEPDC1B-205ENST00000512078 C3P01024 1663 aa13.66□□□□□ -0.22
DEPDC1B-205ENST00000512078 C9orf84Q5VXU9 1444 aa13.65□□□□□ -0.22
DEPDC1B-205ENST00000512078 FAM9AQ8IZU1 332 aaPredicted RBP13.65□□□□□ -0.22
DEPDC1B-205ENST00000512078 NCOA1Q15788 1441 aa13.65□□□□□ -0.22
DEPDC1B-205ENST00000512078 ATP10AO60312 1499 aa13.65□□□□□ -0.23
DEPDC1B-205ENST00000512078 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.63□□□□□ -0.23
DEPDC1B-205ENST00000512078 UBAP1LF5GYI3 381 aa13.62□□□□□ -0.23
DEPDC1B-205ENST00000512078 SAMD9Q5K651 1589 aa13.6□□□□□ -0.23
DEPDC1B-205ENST00000512078 NUP153P49790 1475 aaKnown RBP13.6□□□□□ -0.23
DEPDC1B-205ENST00000512078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.58□□□□□ -0.23
DEPDC1B-205ENST00000512078 HNRNPUL2Q1KMD3 747 aaKnown RBP13.58□□□□□ -0.23
DEPDC1B-205ENST00000512078 CAMSAP1Q5T5Y3 1602 aa13.57□□□□□ -0.24
DEPDC1B-205ENST00000512078 SCAPERQ9BY12 1400 aa13.57□□□□□ -0.24
DEPDC1B-205ENST00000512078 TRAPPC8Q9Y2L5 1435 aa13.56□□□□□ -0.24
DEPDC1B-205ENST00000512078 REREQ9P2R6 1566 aa13.56□□□□□ -0.24
DEPDC1B-205ENST00000512078 ZNF335Q9H4Z2 1342 aaPredicted RBP13.55□□□□□ -0.24
DEPDC1B-205ENST00000512078 HSPA1LP34931 641 aa13.54□□□□□ -0.24
DEPDC1B-205ENST00000512078 P3H3Q8IVL6 736 aa13.54□□□□□ -0.24
DEPDC1B-205ENST00000512078 PRXQ9BXM0 1461 aa13.53□□□□□ -0.24
DEPDC1B-205ENST00000512078 PLEKHD1A6NEE1 506 aa13.53□□□□□ -0.24
DEPDC1B-205ENST00000512078 DIP2CQ9Y2E4 1556 aa13.53□□□□□ -0.24
DEPDC1B-205ENST00000512078 KDM5CP41229 1560 aa13.52□□□□□ -0.25
DEPDC1B-205ENST00000512078 SUPT6HQ7KZ85 1726 aaKnown RBP13.52□□□□□ -0.25
DEPDC1B-205ENST00000512078 AGLP35573 1532 aa13.52□□□□□ -0.25
DEPDC1B-205ENST00000512078 PLCH2O75038 1416 aa13.51□□□□□ -0.25
DEPDC1B-205ENST00000512078 MYO5CQ9NQX4 1742 aa13.5□□□□□ -0.25
DEPDC1B-205ENST00000512078 ZNF142P52746 1687 aaPredicted RBP13.5□□□□□ -0.25
DEPDC1B-205ENST00000512078 MROH2AA6NES4 1674 aa13.49□□□□□ -0.25
DEPDC1B-205ENST00000512078 ZNF518AQ6AHZ1 1483 aa13.49□□□□□ -0.25
DEPDC1B-205ENST00000512078 ABCA6Q8N139 1617 aa13.48□□□□□ -0.25
DEPDC1B-205ENST00000512078 PLA2R1Q13018 1463 aa13.48□□□□□ -0.25
DEPDC1B-205ENST00000512078 NPATQ14207 1427 aa13.47□□□□□ -0.25
DEPDC1B-205ENST00000512078 CNTLNQ9NXG0 1405 aa13.46□□□□□ -0.25
DEPDC1B-205ENST00000512078 TCOF1Q13428 1488 aaKnown RBP13.46□□□□□ -0.25
DEPDC1B-205ENST00000512078 NCKAP5LQ9HCH0 1330 aa13.46□□□□□ -0.25
DEPDC1B-205ENST00000512078 SCAF1Q9H7N4 1312 aaKnown RBP13.45□□□□□ -0.26
DEPDC1B-205ENST00000512078 MYO3AQ8NEV4 1616 aa13.45□□□□□ -0.26
DEPDC1B-205ENST00000512078 PKD2Q13563 968 aa13.44□□□□□ -0.26
DEPDC1B-205ENST00000512078 ESF1Q9H501 851 aaKnown RBP13.44□□□□□ -0.26
DEPDC1B-205ENST00000512078 TOM1O60784 492 aa13.43□□□□□ -0.26
DEPDC1B-205ENST00000512078 PIP4K2BP78356 416 aa13.43□□□□□ -0.26
DEPDC1B-205ENST00000512078 CPS1P31327 1500 aa13.43□□□□□ -0.26
DEPDC1B-205ENST00000512078 CEP170BQ9Y4F5 1589 aaPredicted RBP13.42□□□□□ -0.26
DEPDC1B-205ENST00000512078 MLH3Q9UHC1 1453 aa13.41□□□□□ -0.26
DEPDC1B-205ENST00000512078 ALKQ9UM73 1620 aa13.41□□□□□ -0.26
DEPDC1B-205ENST00000512078 EFCAB2Q5VUJ9 269 aa13.41□□□□□ -0.26
DEPDC1B-205ENST00000512078 POLR1AO95602 1720 aaPredicted RBP13.4□□□□□ -0.26
DEPDC1B-205ENST00000512078 PPP6R1Q9UPN7 881 aa13.39□□□□□ -0.27
DEPDC1B-205ENST00000512078 CDK13Q14004 1512 aaKnown RBP13.39□□□□□ -0.27
DEPDC1B-205ENST00000512078 AFAP1Q8N556 730 aa13.38□□□□□ -0.27
DEPDC1B-205ENST00000512078 PTPRKQ15262 1439 aa13.37□□□□□ -0.27
DEPDC1B-205ENST00000512078 KIDINS220Q9ULH0 1771 aa13.37□□□□□ -0.27
DEPDC1B-205ENST00000512078 RGS17Q9UGC6 210 aaPredicted RBP13.36□□□□□ -0.27
DEPDC1B-205ENST00000512078 ARHGAP5Q13017 1502 aa13.35□□□□□ -0.27
DEPDC1B-205ENST00000512078 SHANK2Q9UPX8 1470 aa13.35□□□□□ -0.27
DEPDC1B-205ENST00000512078 KIF14Q15058 1648 aa13.35□□□□□ -0.27
DEPDC1B-205ENST00000512078 MYT1LQ9UL68 1186 aa13.35□□□□□ -0.27
DEPDC1B-205ENST00000512078 CLTCQ00610 1675 aaKnown RBP13.35□□□□□ -0.27
DEPDC1B-205ENST00000512078 ITSN2Q9NZM3 1697 aa13.35□□□□□ -0.27
DEPDC1B-205ENST00000512078 ZMYM3Q14202 1370 aa13.35□□□□□ -0.27
DEPDC1B-205ENST00000512078 CDC42BPBQ9Y5S2 1711 aa13.34□□□□□ -0.27
DEPDC1B-205ENST00000512078 NEURL4Q96JN8 1562 aa13.34□□□□□ -0.27
DEPDC1B-205ENST00000512078 DNMT1P26358 1616 aaKnown RBP13.32□□□□□ -0.28
DEPDC1B-205ENST00000512078 ABCC1P33527 1531 aa13.31□□□□□ -0.28
DEPDC1B-205ENST00000512078 VWDEQ8N2E2 1590 aa13.31□□□□□ -0.28
DEPDC1B-205ENST00000512078 SETD1AO15047 1707 aaKnown RBP13.3□□□□□ -0.28
DEPDC1B-205ENST00000512078 FOXD1Q16676 465 aa13.3□□□□□ -0.28
DEPDC1B-205ENST00000512078 POTEDQ86YR6 584 aa13.29□□□□□ -0.28
DEPDC1B-205ENST00000512078 A2ML1A8K2U0 1454 aa13.29□□□□□ -0.28
DEPDC1B-205ENST00000512078 RNF17Q9BXT8 1623 aaKnown RBP13.29□□□□□ -0.28
DEPDC1B-205ENST00000512078 PREX2Q70Z35 1606 aa13.28□□□□□ -0.28
DEPDC1B-205ENST00000512078 STRCP1A6NGW2 1772 aa13.25□□□□□ -0.29
DEPDC1B-205ENST00000512078 SYNMO15061 1565 aa13.25□□□□□ -0.29
DEPDC1B-205ENST00000512078 PLXNC1O60486 1568 aa13.24□□□□□ -0.29
DEPDC1B-205ENST00000512078 TROQ12816 1431 aaPredicted RBP13.24□□□□□ -0.29
DEPDC1B-205ENST00000512078 POTEAQ6S8J7 498 aa13.24□□□□□ -0.29
DEPDC1B-205ENST00000512078 SAMD9LQ8IVG5 1584 aa13.22□□□□□ -0.29
DEPDC1B-205ENST00000512078 RANGAP1P46060 587 aaPredicted RBP13.22□□□□□ -0.29
DEPDC1B-205ENST00000512078 DEPDC5O75140 1603 aa13.22□□□□□ -0.29
DEPDC1B-205ENST00000512078 CDK11AQ9UQ88 783 aaPredicted RBP13.21□□□□□ -0.29
DEPDC1B-205ENST00000512078 LRRC7Q96NW7 1537 aa13.2□□□□□ -0.3
DEPDC1B-205ENST00000512078 CLIP1P30622 1438 aa13.2□□□□□ -0.3
DEPDC1B-205ENST00000512078 LRRIQ1Q96JM4 1722 aa13.2□□□□□ -0.3
DEPDC1B-205ENST00000512078 IQGAP1P46940 1657 aa13.2□□□□□ -0.3
DEPDC1B-205ENST00000512078 MED14O60244 1454 aa13.2□□□□□ -0.3
DEPDC1B-205ENST00000512078 CDC42BPAQ5VT25 1732 aa13.19□□□□□ -0.3
DEPDC1B-205ENST00000512078 INO80Q9ULG1 1556 aaPredicted RBP13.17□□□□□ -0.3
DEPDC1B-205ENST00000512078 NPHP4O75161 1426 aaPredicted RBP13.17□□□□□ -0.3
DEPDC1B-205ENST00000512078 ATP7AQ04656 1500 aa13.16□□□□□ -0.3
DEPDC1B-205ENST00000512078 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
DEPDC1B-205ENST00000512078 XIRP1Q702N8 1843 aaKnown RBP13.16□□□□□ -0.3
DEPDC1B-205ENST00000512078 A2MP01023 1474 aa13.16□□□□□ -0.3
DEPDC1B-205ENST00000512078 FMN1Q68DA7 1419 aa13.15□□□□□ -0.3
DEPDC1B-205ENST00000512078 ANKLE2Q86XL3 938 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms