RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 PLSCR2Q9NRY7 297 aa9.15□□□□□ -0.94
CALCOCO2-220ENST00000511816 MS4A4AQ96JQ5 239 aa9.14□□□□□ -0.95
CALCOCO2-220ENST00000511816 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.14□□□□□ -0.95
CALCOCO2-220ENST00000511816 KDM2AQ9Y2K7 1162 aa9.14□□□□□ -0.95
CALCOCO2-220ENST00000511816 DPY19L2Q6NUT2 758 aa9.13□□□□□ -0.95
CALCOCO2-220ENST00000511816 MICALL2Q8IY33 904 aa9.1□□□□□ -0.95
CALCOCO2-220ENST00000511816 PPP1R37O75864 691 aa9.06□□□□□ -0.96
CALCOCO2-220ENST00000511816 TMEM121BQ9BXQ6 578 aaPredicted RBP9.06□□□□□ -0.96
CALCOCO2-220ENST00000511816 WDR70Q9NW82 654 aa9.06□□□□□ -0.96
CALCOCO2-220ENST00000511816 TMC2Q8TDI7 906 aa9.05□□□□□ -0.96
CALCOCO2-220ENST00000511816 SLAIN1Q8ND83 568 aa9.04□□□□□ -0.96
CALCOCO2-220ENST00000511816 NBR1Q14596 966 aa9.03□□□□□ -0.96
CALCOCO2-220ENST00000511816 P3H3Q8IVL6 736 aa9.01□□□□□ -0.97
CALCOCO2-220ENST00000511816 PDE4AP27815 886 aa8.99□□□□□ -0.97
CALCOCO2-220ENST00000511816 SNPHO15079 494 aa8.98□□□□□ -0.97
CALCOCO2-220ENST00000511816 FAM163AQ96GL9 167 aaPredicted RBP8.96□□□□□ -0.98
CALCOCO2-220ENST00000511816 GPHNQ9NQX3 736 aaPredicted RBP8.94□□□□□ -0.98
CALCOCO2-220ENST00000511816 RIMBP2O15034 1052 aa8.93□□□□□ -0.98
CALCOCO2-220ENST00000511816 PCDH10Q9P2E7 1040 aa8.93□□□□□ -0.98
CALCOCO2-220ENST00000511816 C2orf72A6NCS6 295 aa8.92□□□□□ -0.98
CALCOCO2-220ENST00000511816 DDX27Q96GQ7 796 aaKnown RBP8.92□□□□□ -0.98
CALCOCO2-220ENST00000511816 LARP6Q9BRS8 491 aaKnown RBP8.92□□□□□ -0.98
CALCOCO2-220ENST00000511816 DOK7Q18PE1 504 aa8.91□□□□□ -0.98
CALCOCO2-220ENST00000511816 ZNF710Q8N1W2 664 aa8.9□□□□□ -0.98
CALCOCO2-220ENST00000511816 FOXK1P85037 733 aa8.89□□□□□ -0.99
CALCOCO2-220ENST00000511816 CADPS2Q86UW7 1296 aa8.89□□□□□ -0.99
CALCOCO2-220ENST00000511816 CRISPLD2Q9H0B8 497 aa8.89□□□□□ -0.99
CALCOCO2-220ENST00000511816 KIF3CO14782 793 aa8.88□□□□□ -0.99
CALCOCO2-220ENST00000511816 PPP1R15BQ5SWA1 713 aa8.88□□□□□ -0.99
CALCOCO2-220ENST00000511816 TMEM92Q6UXU6 159 aa8.88□□□□□ -0.99
CALCOCO2-220ENST00000511816 NCKAP5LQ9HCH0 1330 aa8.86□□□□□ -0.99
CALCOCO2-220ENST00000511816 PLPP6Q8IY26 295 aa8.86□□□□□ -0.99
CALCOCO2-220ENST00000511816 DSG2Q14126 1118 aa8.85□□□□□ -0.99
CALCOCO2-220ENST00000511816 E2F4Q16254 413 aa8.85□□□□□ -0.99
CALCOCO2-220ENST00000511816 TULP1O00294 542 aaPredicted RBP8.84□□□□□ -0.99
CALCOCO2-220ENST00000511816 ST18O60284 1047 aa8.84□□□□□ -0.99
CALCOCO2-220ENST00000511816 TBC1D12O60347 775 aa8.84□□□□□ -0.99
CALCOCO2-220ENST00000511816 ZNF316A6NFI3 1004 aaPredicted RBP8.83□□□□□ -1
CALCOCO2-220ENST00000511816 MFSD10Q14728 455 aa8.83□□□□□ -1
CALCOCO2-220ENST00000511816 ZSWIM6Q9HCJ5 1215 aa8.83□□□□□ -1
CALCOCO2-220ENST00000511816 ARHGEF1Q92888 912 aaKnown RBP8.82□□□□□ -1
CALCOCO2-220ENST00000511816 CDAN1Q8IWY9 1227 aa8.8□□□□□ -1
CALCOCO2-220ENST00000511816 KCNV2Q8TDN2 545 aa8.8□□□□□ -1
CALCOCO2-220ENST00000511816 SLC34A2O95436 690 aa8.79□□□□□ -1
CALCOCO2-220ENST00000511816 TPRNQ4KMQ1 711 aa8.78□□□□□ -1
CALCOCO2-220ENST00000511816 HOXB3P14651 431 aaPredicted RBP8.76□□□□□ -1.01
CALCOCO2-220ENST00000511816 MAP3K9P80192 1104 aa8.76□□□□□ -1.01
CALCOCO2-220ENST00000511816 UPF1Q92900 1129 aaKnown RBP eCLIP8.76□□□□□ -1.01
CALCOCO2-220ENST00000511816 PTCD2Q8WV60 388 aaKnown RBP8.74□□□□□ -1.01
CALCOCO2-220ENST00000511816 PCDHGA4Q9Y5G9 962 aa8.74□□□□□ -1.01
CALCOCO2-220ENST00000511816 SMYD5Q6GMV2 418 aa8.73□□□□□ -1.01
CALCOCO2-220ENST00000511816 POTEB3A0JP26 581 aa8.72□□□□□ -1.01
CALCOCO2-220ENST00000511816 HOXB1P14653 301 aaPredicted RBP8.72□□□□□ -1.01
CALCOCO2-220ENST00000511816 EMP3P54852 163 aa8.72□□□□□ -1.01
CALCOCO2-220ENST00000511816 CAMK2BQ13554 666 aa8.72□□□□□ -1.01
CALCOCO2-220ENST00000511816 ARSIQ5FYB1 569 aa8.72□□□□□ -1.01
CALCOCO2-220ENST00000511816 POTEBQ6S5H4 581 aa8.72□□□□□ -1.01
CALCOCO2-220ENST00000511816 OXER1Q8TDS5 423 aa8.71□□□□□ -1.02
CALCOCO2-220ENST00000511816 ARIH1Q9Y4X5 557 aaPredicted RBP8.71□□□□□ -1.02
CALCOCO2-220ENST00000511816 PRKCSHP14314 528 aaPredicted RBP8.69□□□□□ -1.02
CALCOCO2-220ENST00000511816 GPR153Q6NV75 609 aa8.69□□□□□ -1.02
CALCOCO2-220ENST00000511816 PSDA5PKW4 1024 aaPredicted RBP8.68□□□□□ -1.02
CALCOCO2-220ENST00000511816 NUDT7P0C024 238 aa8.68□□□□□ -1.02
CALCOCO2-220ENST00000511816 ERBB3P21860 1342 aa8.68□□□□□ -1.02
CALCOCO2-220ENST00000511816 DPYSL4O14531 572 aa8.67□□□□□ -1.02
CALCOCO2-220ENST00000511816 EMILIN3Q9NT22 766 aa8.67□□□□□ -1.02
CALCOCO2-220ENST00000511816 SPDYE16A6NNV3 312 aaPredicted RBP8.66□□□□□ -1.02
CALCOCO2-220ENST00000511816 EVI5O60447 810 aa8.66□□□□□ -1.02
CALCOCO2-220ENST00000511816 SPNS2Q8IVW8 549 aa8.65□□□□□ -1.02
CALCOCO2-220ENST00000511816 MARVELD3Q96A59 401 aa8.65□□□□□ -1.02
CALCOCO2-220ENST00000511816 LMOD2Q6P5Q4 547 aa8.64□□□□□ -1.03
CALCOCO2-220ENST00000511816 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.64□□□□□ -1.03
CALCOCO2-220ENST00000511816 KHSRPQ92945 711 aaKnown RBP eCLIP8.63□□□□□ -1.03
CALCOCO2-220ENST00000511816 KCNH8Q96L42 1107 aa8.63□□□□□ -1.03
CALCOCO2-220ENST00000511816 TESPA1A2RU30 521 aaPredicted RBP8.62□□□□□ -1.03
CALCOCO2-220ENST00000511816 FAM205CA6NFA0 338 aa8.62□□□□□ -1.03
CALCOCO2-220ENST00000511816 SEMA3EO15041 775 aa8.62□□□□□ -1.03
CALCOCO2-220ENST00000511816 MMRN1Q13201 1228 aa8.62□□□□□ -1.03
CALCOCO2-220ENST00000511816 PPP4R3BQ5MIZ7 849 aa8.62□□□□□ -1.03
CALCOCO2-220ENST00000511816 PDIA6Q15084 440 aa8.61□□□□□ -1.03
CALCOCO2-220ENST00000511816 VARS2Q5ST30 1063 aaKnown RBP8.61□□□□□ -1.03
CALCOCO2-220ENST00000511816 KRTAP3-3Q9BYR6 98 aa8.61□□□□□ -1.03
CALCOCO2-220ENST00000511816 KRTAP3-2Q9BYR7 98 aa8.61□□□□□ -1.03
CALCOCO2-220ENST00000511816 LHX6Q9UPM6 363 aa8.6□□□□□ -1.03
CALCOCO2-220ENST00000511816 ZNF454Q8N9F8 522 aa8.58□□□□□ -1.04
CALCOCO2-220ENST00000511816 HS3ST6Q96QI5 342 aa8.58□□□□□ -1.04
CALCOCO2-220ENST00000511816 JPH4Q96JJ6 628 aa8.57□□□□□ -1.04
CALCOCO2-220ENST00000511816 ANO8Q9HCE9 1232 aaPredicted RBP8.57□□□□□ -1.04
CALCOCO2-220ENST00000511816 PHF14O94880 888 aa8.55□□□□□ -1.04
CALCOCO2-220ENST00000511816 FBXW7Q969H0 707 aa8.55□□□□□ -1.04
CALCOCO2-220ENST00000511816 EPAS1Q99814 870 aa8.55□□□□□ -1.04
CALCOCO2-220ENST00000511816 KDM4FA0A1W2PPD8 638 aa8.54□□□□□ -1.04
CALCOCO2-220ENST00000511816 GRXCR2A6NFK2 248 aa8.54□□□□□ -1.04
CALCOCO2-220ENST00000511816 DDX12PQ92771 950 aa8.54□□□□□ -1.04
CALCOCO2-220ENST00000511816 PTGER2P43116 358 aa8.53□□□□□ -1.04
CALCOCO2-220ENST00000511816 TYW1BQ6NUM6 668 aa8.53□□□□□ -1.04
CALCOCO2-220ENST00000511816 ZDHHC16Q969W1 377 aa8.53□□□□□ -1.04
CALCOCO2-220ENST00000511816 PBX2P40425 430 aa8.52□□□□□ -1.05
CALCOCO2-220ENST00000511816 FOSBP53539 338 aa8.52□□□□□ -1.05
CALCOCO2-220ENST00000511816 ZNF687Q8N1G0 1237 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms