RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 ADAMTSL3P82987 1691 aa34.27■■■■□ 3.08
LIN54-208ENST00000509748 YEATS2Q9ULM3 1422 aa34.26■■■■□ 3.07
LIN54-208ENST00000509748 ARHGAP5Q13017 1502 aa34.25■■■■□ 3.07
LIN54-208ENST00000509748 CDC42BPBQ9Y5S2 1711 aa34.25■■■■□ 3.07
LIN54-208ENST00000509748 MAGI2Q86UL8 1455 aa34.25■■■■□ 3.07
LIN54-208ENST00000509748 CEP162Q5TB80 1403 aa34.24■■■■□ 3.07
LIN54-208ENST00000509748 ZFYVE16Q7Z3T8 1539 aa34.22■■■■□ 3.07
LIN54-208ENST00000509748 BCORL1Q5H9F3 1711 aa34.21■■■■□ 3.07
LIN54-208ENST00000509748 ARID4BQ4LE39 1312 aaPredicted RBP34.19■■■■□ 3.06
LIN54-208ENST00000509748 PREX2Q70Z35 1606 aa34.19■■■■□ 3.06
LIN54-208ENST00000509748 LOC105371045A0A1W2PR82 267 aa34.17■■■■□ 3.06
LIN54-208ENST00000509748 SIGLEC1Q9BZZ2 1709 aa34.17■■■■□ 3.06
LIN54-208ENST00000509748 CDC42BPAQ5VT25 1732 aa34.14■■■■□ 3.06
LIN54-208ENST00000509748 AFAP1Q8N556 730 aa34.14■■■■□ 3.06
LIN54-208ENST00000509748 PTPRMP28827 1452 aa34.13■■■■□ 3.05
LIN54-208ENST00000509748 ZNF518AQ6AHZ1 1483 aa34.13■■■■□ 3.05
LIN54-208ENST00000509748 KDM5CP41229 1560 aa34.11■■■■□ 3.05
LIN54-208ENST00000509748 ARHGEF12Q9NZN5 1544 aa34.1■■■■□ 3.05
LIN54-208ENST00000509748 MADDQ8WXG6 1647 aa34.1■■■■□ 3.05
LIN54-208ENST00000509748 GPATCH8Q9UKJ3 1502 aaKnown RBP34.08■■■■□ 3.05
LIN54-208ENST00000509748 ATP10AO60312 1499 aa34.07■■■■□ 3.05
LIN54-208ENST00000509748 HECW2Q9P2P5 1572 aa34.07■■■■□ 3.05
LIN54-208ENST00000509748 ABCC1P33527 1531 aa34.07■■■■□ 3.04
LIN54-208ENST00000509748 TRAPPC8Q9Y2L5 1435 aa34.05■■■■□ 3.04
LIN54-208ENST00000509748 MTUS2Q5JR59 1369 aa34.02■■■■□ 3.04
LIN54-208ENST00000509748 ITSN2Q9NZM3 1697 aa34.01■■■■□ 3.04
LIN54-208ENST00000509748 C9orf84Q5VXU9 1444 aa34.01■■■■□ 3.03
LIN54-208ENST00000509748 MLH3Q9UHC1 1453 aa34■■■■□ 3.03
LIN54-208ENST00000509748 SAMD9LQ8IVG5 1584 aa33.98■■■■□ 3.03
LIN54-208ENST00000509748 RIMS1Q86UR5 1692 aaKnown RBP33.97■■■■□ 3.03
LIN54-208ENST00000509748 DIP2CQ9Y2E4 1556 aa33.95■■■■□ 3.03
LIN54-208ENST00000509748 ZNF777Q9ULD5 760 aaPredicted RBP33.95■■■■□ 3.03
LIN54-208ENST00000509748 CCNB3Q8WWL7 1395 aa33.95■■■■□ 3.02
LIN54-208ENST00000509748 MLECQ14165 292 aa33.94■■■■□ 3.02
LIN54-208ENST00000509748 EHBP1L1Q8N3D4 1523 aa33.93■■■■□ 3.02
LIN54-208ENST00000509748 ABCA6Q8N139 1617 aa33.91■■■■□ 3.02
LIN54-208ENST00000509748 CFDP1Q9UEE9 299 aaPredicted RBP33.91■■■■□ 3.02
LIN54-208ENST00000509748 MYT1LQ9UL68 1186 aa33.89■■■■□ 3.02
LIN54-208ENST00000509748 REREQ9P2R6 1566 aa33.89■■■■□ 3.02
LIN54-208ENST00000509748 KIDINS220Q9ULH0 1771 aa33.88■■■■□ 3.01
LIN54-208ENST00000509748 HNRNPMP52272 730 aaKnown RBP eCLIP33.88■■■■□ 3.01
LIN54-208ENST00000509748 SYCP2Q9BX26 1530 aa33.88■■■■□ 3.01
LIN54-208ENST00000509748 KIAA1107Q9UPP5 1409 aa33.87■■■■□ 3.01
LIN54-208ENST00000509748 TIAM1Q13009 1591 aa33.87■■■■□ 3.01
LIN54-208ENST00000509748 VPS8Q8N3P4 1428 aa33.87■■■■□ 3.01
LIN54-208ENST00000509748 FER1L4A9Z1Z3 1794 aa33.85■■■■□ 3.01
LIN54-208ENST00000509748 PLEKHH2Q8IVE3 1493 aa33.82■■■■□ 3.01
LIN54-208ENST00000509748 ZNF644Q9H582 1327 aaPredicted RBP33.79■■■■□ 3
LIN54-208ENST00000509748 AGLP35573 1532 aa33.79■■■■□ 3
LIN54-208ENST00000509748 SPAG9O60271 1321 aaKnown RBP33.77■■■■□ 3
LIN54-208ENST00000509748 NCOA2Q15596 1464 aa33.76■■■■□ 3
LIN54-208ENST00000509748 LMTK3Q96Q04 1460 aa33.76■■■□□ 2.99
LIN54-208ENST00000509748 PLPPR3Q6T4P5 718 aa33.74■■■□□ 2.99
LIN54-208ENST00000509748 SUPT6HQ7KZ85 1726 aaKnown RBP33.73■■■□□ 2.99
LIN54-208ENST00000509748 MBD5Q9P267 1494 aa33.73■■■□□ 2.99
LIN54-208ENST00000509748 LRRC9Q6ZRR7 1453 aa33.69■■■□□ 2.98
LIN54-208ENST00000509748 ATP7AQ04656 1500 aa33.69■■■□□ 2.98
LIN54-208ENST00000509748 INO80Q9ULG1 1556 aaPredicted RBP33.69■■■□□ 2.98
LIN54-208ENST00000509748 CEBPAP49715 358 aaPredicted RBP33.67■■■□□ 2.98
LIN54-208ENST00000509748 MAP3K1Q13233 1512 aa33.67■■■□□ 2.98
LIN54-208ENST00000509748 KANK4Q5T7N3 995 aaPredicted RBP33.65■■■□□ 2.98
LIN54-208ENST00000509748 PLXNC1O60486 1568 aa33.59■■■□□ 2.97
LIN54-208ENST00000509748 A2MP01023 1474 aa33.58■■■□□ 2.97
LIN54-208ENST00000509748 CAMSAP2Q08AD1 1489 aa33.58■■■□□ 2.97
LIN54-208ENST00000509748 HSPA2P54652 639 aa33.58■■■□□ 2.97
LIN54-208ENST00000509748 RTEL1-TNFRSF6BF6WH68 1400 aa33.56■■■□□ 2.96
LIN54-208ENST00000509748 C3P01024 1663 aa33.53■■■□□ 2.96
LIN54-208ENST00000509748 SETD1BQ9UPS6 1966 aaKnown RBP33.52■■■□□ 2.96
LIN54-208ENST00000509748 CCDC141Q6ZP82 1450 aa33.51■■■□□ 2.96
LIN54-208ENST00000509748 ADGBQ8N7X0 1667 aa33.51■■■□□ 2.95
LIN54-208ENST00000509748 RSPH4AQ5TD94 716 aa33.5■■■□□ 2.95
LIN54-208ENST00000509748 CNTLNQ9NXG0 1405 aa33.5■■■□□ 2.95
LIN54-208ENST00000509748 PREX1Q8TCU6 1659 aa33.49■■■□□ 2.95
LIN54-208ENST00000509748 ESF1Q9H501 851 aaKnown RBP33.49■■■□□ 2.95
LIN54-208ENST00000509748 ARHGEF5Q12774 1597 aa33.47■■■□□ 2.95
LIN54-208ENST00000509748 DHX29Q7Z478 1369 aaKnown RBP33.44■■■□□ 2.94
LIN54-208ENST00000509748 MYOM3Q5VTT5 1437 aa33.43■■■□□ 2.94
LIN54-208ENST00000509748 MROH2AA6NES4 1674 aa33.42■■■□□ 2.94
LIN54-208ENST00000509748 MIA2Q96PC5 1412 aa33.4■■■□□ 2.94
LIN54-208ENST00000509748 ZMYM3Q14202 1370 aa33.4■■■□□ 2.94
LIN54-208ENST00000509748 GGT6Q6P531 493 aa33.4■■■□□ 2.94
LIN54-208ENST00000509748 ILDR1Q86SU0 546 aaPredicted RBP33.4■■■□□ 2.94
LIN54-208ENST00000509748 UHRF1BP1Q6BDS2 1440 aa33.38■■■□□ 2.93
LIN54-208ENST00000509748 CLTCQ00610 1675 aaKnown RBP33.36■■■□□ 2.93
LIN54-208ENST00000509748 APLP2Q06481 763 aa33.36■■■□□ 2.93
LIN54-208ENST00000509748 PPP6R1Q9UPN7 881 aa33.36■■■□□ 2.93
LIN54-208ENST00000509748 TSPY4P0CV99 314 aa33.35■■■□□ 2.93
LIN54-208ENST00000509748 TSPY10P0CW01 314 aa33.35■■■□□ 2.93
LIN54-208ENST00000509748 NPATQ14207 1427 aa33.32■■■□□ 2.92
LIN54-208ENST00000509748 MAST1Q9Y2H9 1570 aa33.3■■■□□ 2.92
LIN54-208ENST00000509748 KIF3BO15066 747 aa33.29■■■□□ 2.92
LIN54-208ENST00000509748 STRCQ7RTU9 1775 aa33.27■■■□□ 2.92
LIN54-208ENST00000509748 PTPRKQ15262 1439 aa33.26■■■□□ 2.91
LIN54-208ENST00000509748 PTPN23Q9H3S7 1636 aa33.2■■■□□ 2.91
LIN54-208ENST00000509748 ABCC5O15440 1437 aa33.18■■■□□ 2.9
LIN54-208ENST00000509748 FGD6Q6ZV73 1430 aa33.18■■■□□ 2.9
LIN54-208ENST00000509748 TCOF1Q13428 1488 aaKnown RBP33.15■■■□□ 2.9
LIN54-208ENST00000509748 FAM135AQ9P2D6 1515 aa33.15■■■□□ 2.9
LIN54-208ENST00000509748 KDM5DQ9BY66 1539 aa33.13■■■□□ 2.89
LIN54-208ENST00000509748 DMRT2Q9Y5R5 561 aa33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms