RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 AEBP2Q6ZN18 517 aaPredicted RBP25.83■■□□□ 1.73
SKP2-205ENST00000509692 MTUS2Q5JR59 1369 aa25.81■■□□□ 1.72
SKP2-205ENST00000509692 SCAPERQ9BY12 1400 aa25.81■■□□□ 1.72
SKP2-205ENST00000509692 PREX2Q70Z35 1606 aa25.81■■□□□ 1.72
SKP2-205ENST00000509692 CDC42BPAQ5VT25 1732 aa25.81■■□□□ 1.72
SKP2-205ENST00000509692 POGZQ7Z3K3 1410 aa25.76■■□□□ 1.71
SKP2-205ENST00000509692 EHBP1L1Q8N3D4 1523 aa25.75■■□□□ 1.71
SKP2-205ENST00000509692 GPATCH8Q9UKJ3 1502 aaKnown RBP25.75■■□□□ 1.71
SKP2-205ENST00000509692 TIAM1Q13009 1591 aa25.74■■□□□ 1.71
SKP2-205ENST00000509692 ZMYM4Q5VZL5 1548 aa25.74■■□□□ 1.71
SKP2-205ENST00000509692 CCNB3Q8WWL7 1395 aa25.69■■□□□ 1.7
SKP2-205ENST00000509692 MAP3K1Q13233 1512 aa25.69■■□□□ 1.7
SKP2-205ENST00000509692 ARHGEF40Q8TER5 1519 aa25.69■■□□□ 1.7
SKP2-205ENST00000509692 ARHGEF12Q9NZN5 1544 aa25.69■■□□□ 1.7
SKP2-205ENST00000509692 ABCC1P33527 1531 aa25.68■■□□□ 1.7
SKP2-205ENST00000509692 APLP2Q06481 763 aa25.68■■□□□ 1.7
SKP2-205ENST00000509692 AFAP1Q8N556 730 aa25.68■■□□□ 1.7
SKP2-205ENST00000509692 YEATS2Q9ULM3 1422 aa25.68■■□□□ 1.7
SKP2-205ENST00000509692 ZNF777Q9ULD5 760 aaPredicted RBP25.66■■□□□ 1.7
SKP2-205ENST00000509692 ZNF518AQ6AHZ1 1483 aa25.66■■□□□ 1.7
SKP2-205ENST00000509692 MAGI2Q86UL8 1455 aa25.66■■□□□ 1.7
SKP2-205ENST00000509692 ZFYVE16Q7Z3T8 1539 aa25.66■■□□□ 1.7
SKP2-205ENST00000509692 SAMD9LQ8IVG5 1584 aa25.65■■□□□ 1.7
SKP2-205ENST00000509692 CFDP1Q9UEE9 299 aaPredicted RBP25.64■■□□□ 1.7
SKP2-205ENST00000509692 ITSN2Q9NZM3 1697 aa25.64■■□□□ 1.7
SKP2-205ENST00000509692 TRAPPC8Q9Y2L5 1435 aa25.64■■□□□ 1.69
SKP2-205ENST00000509692 LRRC9Q6ZRR7 1453 aa25.64■■□□□ 1.69
SKP2-205ENST00000509692 KDM5CP41229 1560 aa25.64■■□□□ 1.69
SKP2-205ENST00000509692 SUPT6HQ7KZ85 1726 aaKnown RBP25.63■■□□□ 1.69
SKP2-205ENST00000509692 NCOA2Q15596 1464 aa25.62■■□□□ 1.69
SKP2-205ENST00000509692 KANK4Q5T7N3 995 aaPredicted RBP25.62■■□□□ 1.69
SKP2-205ENST00000509692 SIGLEC1Q9BZZ2 1709 aa25.59■■□□□ 1.69
SKP2-205ENST00000509692 ARID4BQ4LE39 1312 aaPredicted RBP25.58■■□□□ 1.69
SKP2-205ENST00000509692 SYCP2Q9BX26 1530 aa25.58■■□□□ 1.69
SKP2-205ENST00000509692 HNRNPMP52272 730 aaKnown RBP eCLIP25.57■■□□□ 1.68
SKP2-205ENST00000509692 ZNF644Q9H582 1327 aaPredicted RBP25.56■■□□□ 1.68
SKP2-205ENST00000509692 HECW2Q9P2P5 1572 aa25.56■■□□□ 1.68
SKP2-205ENST00000509692 MLH3Q9UHC1 1453 aa25.55■■□□□ 1.68
SKP2-205ENST00000509692 KIAA1107Q9UPP5 1409 aa25.55■■□□□ 1.68
SKP2-205ENST00000509692 BCORL1Q5H9F3 1711 aa25.55■■□□□ 1.68
SKP2-205ENST00000509692 ATP10AO60312 1499 aa25.54■■□□□ 1.68
SKP2-205ENST00000509692 ADAMTSL3P82987 1691 aa25.53■■□□□ 1.68
SKP2-205ENST00000509692 PLEKHH2Q8IVE3 1493 aa25.53■■□□□ 1.68
SKP2-205ENST00000509692 MYT1LQ9UL68 1186 aa25.52■■□□□ 1.68
SKP2-205ENST00000509692 KIDINS220Q9ULH0 1771 aa25.5■■□□□ 1.67
SKP2-205ENST00000509692 DIP2CQ9Y2E4 1556 aa25.5■■□□□ 1.67
SKP2-205ENST00000509692 ABCA6Q8N139 1617 aa25.5■■□□□ 1.67
SKP2-205ENST00000509692 C9orf84Q5VXU9 1444 aa25.5■■□□□ 1.67
SKP2-205ENST00000509692 MBD5Q9P267 1494 aa25.47■■□□□ 1.67
SKP2-205ENST00000509692 MADDQ8WXG6 1647 aa25.46■■□□□ 1.67
SKP2-205ENST00000509692 SPAG9O60271 1321 aaKnown RBP25.44■■□□□ 1.66
SKP2-205ENST00000509692 CAMSAP2Q08AD1 1489 aa25.43■■□□□ 1.66
SKP2-205ENST00000509692 MLECQ14165 292 aa25.43■■□□□ 1.66
SKP2-205ENST00000509692 REREQ9P2R6 1566 aa25.42■■□□□ 1.66
SKP2-205ENST00000509692 INO80Q9ULG1 1556 aaPredicted RBP25.4■■□□□ 1.66
SKP2-205ENST00000509692 ATP7AQ04656 1500 aa25.4■■□□□ 1.66
SKP2-205ENST00000509692 PTPRMP28827 1452 aa25.4■■□□□ 1.66
SKP2-205ENST00000509692 MYOM3Q5VTT5 1437 aa25.39■■□□□ 1.66
SKP2-205ENST00000509692 PPARGC1BQ86YN6 1023 aaKnown RBP25.39■■□□□ 1.66
SKP2-205ENST00000509692 RIMS1Q86UR5 1692 aaKnown RBP25.37■■□□□ 1.65
SKP2-205ENST00000509692 MIA2Q96PC5 1412 aa25.35■■□□□ 1.65
SKP2-205ENST00000509692 CCDC141Q6ZP82 1450 aa25.34■■□□□ 1.65
SKP2-205ENST00000509692 AGLP35573 1532 aa25.33■■□□□ 1.65
SKP2-205ENST00000509692 FER1L4A9Z1Z3 1794 aa25.33■■□□□ 1.65
SKP2-205ENST00000509692 ARHGEF5Q12774 1597 aa25.32■■□□□ 1.64
SKP2-205ENST00000509692 RSPH4AQ5TD94 716 aa25.31■■□□□ 1.64
SKP2-205ENST00000509692 RTEL1-TNFRSF6BF6WH68 1400 aa25.3■■□□□ 1.64
SKP2-205ENST00000509692 A2MP01023 1474 aa25.28■■□□□ 1.64
SKP2-205ENST00000509692 PLXNC1O60486 1568 aa25.27■■□□□ 1.64
SKP2-205ENST00000509692 ADGBQ8N7X0 1667 aa25.26■■□□□ 1.63
SKP2-205ENST00000509692 PTPN23Q9H3S7 1636 aa25.25■■□□□ 1.63
SKP2-205ENST00000509692 PLPPR3Q6T4P5 718 aa25.24■■□□□ 1.63
SKP2-205ENST00000509692 FGD6Q6ZV73 1430 aa25.24■■□□□ 1.63
SKP2-205ENST00000509692 TSPY4P0CV99 314 aa25.23■■□□□ 1.63
SKP2-205ENST00000509692 TSPY10P0CW01 314 aa25.23■■□□□ 1.63
SKP2-205ENST00000509692 DHX29Q7Z478 1369 aaKnown RBP25.2■■□□□ 1.62
SKP2-205ENST00000509692 MAST1Q9Y2H9 1570 aa25.18■■□□□ 1.62
SKP2-205ENST00000509692 TCOF1Q13428 1488 aaKnown RBP25.18■■□□□ 1.62
SKP2-205ENST00000509692 CEBPAP49715 358 aaPredicted RBP25.18■■□□□ 1.62
SKP2-205ENST00000509692 ABCC5O15440 1437 aa25.15■■□□□ 1.62
SKP2-205ENST00000509692 GGT6Q6P531 493 aa25.14■■□□□ 1.61
SKP2-205ENST00000509692 ESF1Q9H501 851 aaKnown RBP25.13■■□□□ 1.61
SKP2-205ENST00000509692 CROCC2H7BZ55 1655 aa25.12■■□□□ 1.61
SKP2-205ENST00000509692 C3P01024 1663 aa25.12■■□□□ 1.61
SKP2-205ENST00000509692 DNMT1P26358 1616 aaKnown RBP25.11■■□□□ 1.61
SKP2-205ENST00000509692 DAPK1P53355 1430 aa25.1■■□□□ 1.61
SKP2-205ENST00000509692 CNTLNQ9NXG0 1405 aa25.1■■□□□ 1.61
SKP2-205ENST00000509692 LMTK3Q96Q04 1460 aa25.09■■□□□ 1.61
SKP2-205ENST00000509692 KIF3BO15066 747 aa25.09■■□□□ 1.61
SKP2-205ENST00000509692 SHANK2Q9UPX8 1470 aa25.09■■□□□ 1.61
SKP2-205ENST00000509692 CLTCQ00610 1675 aaKnown RBP25.07■■□□□ 1.6
SKP2-205ENST00000509692 FAM50AQ14320 339 aaKnown RBP25.06■■□□□ 1.6
SKP2-205ENST00000509692 MROH2AA6NES4 1674 aa25.05■■□□□ 1.6
SKP2-205ENST00000509692 ZMYM3Q14202 1370 aa25.04■■□□□ 1.6
SKP2-205ENST00000509692 SETD1BQ9UPS6 1966 aaKnown RBP25.04■■□□□ 1.6
SKP2-205ENST00000509692 PPP6R1Q9UPN7 881 aa25.04■■□□□ 1.6
SKP2-205ENST00000509692 RRBP1Q9P2E9 1410 aaKnown RBP25.03■■□□□ 1.6
SKP2-205ENST00000509692 CHIC2Q9UKJ5 165 aa25.02■■□□□ 1.6
SKP2-205ENST00000509692 RRP7BPQ9NSQ0 103 aa25.01■■□□□ 1.59
SKP2-205ENST00000509692 DUOX2Q9NRD8 1548 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 253.3 ms