RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 SYNJ2O15056 1496 aa25.17■■□□□ 1.62
CCHCR1-228ENST00000509552 TROQ12816 1431 aaPredicted RBP25.15■■□□□ 1.62
CCHCR1-228ENST00000509552 ZNF644Q9H582 1327 aaPredicted RBP25.13■■□□□ 1.61
CCHCR1-228ENST00000509552 CEP170Q5SW79 1584 aa25.13■■□□□ 1.61
CCHCR1-228ENST00000509552 HSPA5P11021 654 aaKnown RBP25.12■■□□□ 1.61
CCHCR1-228ENST00000509552 EIF4G2P78344 907 aaKnown RBP eCLIP25.12■■□□□ 1.61
CCHCR1-228ENST00000509552 CARMIL2Q6F5E8 1435 aa25.11■■□□□ 1.61
CCHCR1-228ENST00000509552 PRG4Q92954 1404 aaPredicted RBP25.1■■□□□ 1.61
CCHCR1-228ENST00000509552 L3MBTL2Q969R5 705 aa25.1■■□□□ 1.61
CCHCR1-228ENST00000509552 FBLN2P98095 1184 aa25.09■■□□□ 1.61
CCHCR1-228ENST00000509552 FOXD1Q16676 465 aa25.09■■□□□ 1.61
CCHCR1-228ENST00000509552 ANKRD30BQ9BXX2 1392 aa25.08■■□□□ 1.61
CCHCR1-228ENST00000509552 ITSN2Q9NZM3 1697 aa25.08■■□□□ 1.61
CCHCR1-228ENST00000509552 CFDP1Q9UEE9 299 aaPredicted RBP25.08■■□□□ 1.61
CCHCR1-228ENST00000509552 PLB1Q6P1J6 1458 aa25.08■■□□□ 1.6
CCHCR1-228ENST00000509552 RPRD2Q5VT52 1461 aaKnown RBP25.07■■□□□ 1.6
CCHCR1-228ENST00000509552 CAMSAP2Q08AD1 1489 aa25.06■■□□□ 1.6
CCHCR1-228ENST00000509552 SLC4A1APQ9BWU0 796 aaKnown RBP25.06■■□□□ 1.6
CCHCR1-228ENST00000509552 WASHC2AQ641Q2 1341 aa25.04■■□□□ 1.6
CCHCR1-228ENST00000509552 JPH4Q96JJ6 628 aa25.04■■□□□ 1.6
CCHCR1-228ENST00000509552 NUP160Q12769 1436 aa25.03■■□□□ 1.6
CCHCR1-228ENST00000509552 ADCY10Q96PN6 1610 aa25.03■■□□□ 1.6
CCHCR1-228ENST00000509552 GPATCH8Q9UKJ3 1502 aaKnown RBP25.02■■□□□ 1.6
CCHCR1-228ENST00000509552 ADGBQ8N7X0 1667 aa24.99■■□□□ 1.59
CCHCR1-228ENST00000509552 NCOA1Q15788 1441 aa24.98■■□□□ 1.59
CCHCR1-228ENST00000509552 KIF14Q15058 1648 aa24.98■■□□□ 1.59
CCHCR1-228ENST00000509552 NEFLP07196 543 aa24.98■■□□□ 1.59
CCHCR1-228ENST00000509552 FKBP8Q14318 412 aa24.98■■□□□ 1.59
CCHCR1-228ENST00000509552 ZNF777Q9ULD5 760 aaPredicted RBP24.97■■□□□ 1.59
CCHCR1-228ENST00000509552 TEX14Q8IWB6 1497 aa24.97■■□□□ 1.59
CCHCR1-228ENST00000509552 ADGRL2O95490 1459 aa24.96■■□□□ 1.59
CCHCR1-228ENST00000509552 CNTLNQ9NXG0 1405 aa24.94■■□□□ 1.58
CCHCR1-228ENST00000509552 PLEKHD1A6NEE1 506 aa24.94■■□□□ 1.58
CCHCR1-228ENST00000509552 ANKRD30AQ9BXX3 1397 aa24.93■■□□□ 1.58
CCHCR1-228ENST00000509552 PZPP20742 1482 aa24.93■■□□□ 1.58
CCHCR1-228ENST00000509552 CROCC2H7BZ55 1655 aa24.92■■□□□ 1.58
CCHCR1-228ENST00000509552 NBPF8Q3BBV2 869 aa24.92■■□□□ 1.58
CCHCR1-228ENST00000509552 CCDC7Q96M83 1385 aa24.9■■□□□ 1.58
CCHCR1-228ENST00000509552 ABCA8O94911 1581 aa24.9■■□□□ 1.58
CCHCR1-228ENST00000509552 BCANQ96GW7 911 aa24.89■■□□□ 1.58
CCHCR1-228ENST00000509552 KIAA1107Q9UPP5 1409 aa24.87■■□□□ 1.57
CCHCR1-228ENST00000509552 HNRNPUQ00839 825 aaKnown RBP eCLIP24.85■■□□□ 1.57
CCHCR1-228ENST00000509552 ATP10BO94823 1461 aa24.84■■□□□ 1.57
CCHCR1-228ENST00000509552 C11orf95C9JLR9 678 aaPredicted RBP24.84■■□□□ 1.57
CCHCR1-228ENST00000509552 ANKRD50Q9ULJ7 1429 aa24.84■■□□□ 1.57
CCHCR1-228ENST00000509552 TSHZ2Q9NRE2 1034 aa24.83■■□□□ 1.57
CCHCR1-228ENST00000509552 CDC42BPAQ5VT25 1732 aa24.83■■□□□ 1.57
CCHCR1-228ENST00000509552 ABCC10Q5T3U5 1492 aa24.83■■□□□ 1.57
CCHCR1-228ENST00000509552 SPATA31E1Q6ZUB1 1445 aa24.83■■□□□ 1.57
CCHCR1-228ENST00000509552 SHANK2Q9UPX8 1470 aa24.82■■□□□ 1.56
CCHCR1-228ENST00000509552 MYT1Q01538 1121 aa24.82■■□□□ 1.56
CCHCR1-228ENST00000509552 PKD2Q13563 968 aa24.81■■□□□ 1.56
CCHCR1-228ENST00000509552 C9orf84Q5VXU9 1444 aa24.78■■□□□ 1.56
CCHCR1-228ENST00000509552 TSPY4P0CV99 314 aa24.78■■□□□ 1.56
CCHCR1-228ENST00000509552 TSPY10P0CW01 314 aa24.78■■□□□ 1.56
CCHCR1-228ENST00000509552 PRKRIP1Q9H875 184 aaPredicted RBP24.78■■□□□ 1.56
CCHCR1-228ENST00000509552 POLR1AO95602 1720 aaPredicted RBP24.78■■□□□ 1.56
CCHCR1-228ENST00000509552 KIF7Q2M1P5 1343 aa24.77■■□□□ 1.56
CCHCR1-228ENST00000509552 MBD5Q9P267 1494 aa24.77■■□□□ 1.56
CCHCR1-228ENST00000509552 PTPRGP23470 1445 aa24.74■■□□□ 1.55
CCHCR1-228ENST00000509552 NUP155O75694 1391 aa24.73■■□□□ 1.55
CCHCR1-228ENST00000509552 ZNF326Q5BKZ1 582 aaKnown RBP24.69■■□□□ 1.54
CCHCR1-228ENST00000509552 MRS2Q9HD23 443 aa24.69■■□□□ 1.54
CCHCR1-228ENST00000509552 ARHGEF5Q12774 1597 aa24.69■■□□□ 1.54
CCHCR1-228ENST00000509552 KDM5DQ9BY66 1539 aa24.68■■□□□ 1.54
CCHCR1-228ENST00000509552 USP47Q96K76 1375 aa24.68■■□□□ 1.54
CCHCR1-228ENST00000509552 CCDC184Q52MB2 194 aa24.68■■□□□ 1.54
CCHCR1-228ENST00000509552 KIF15Q9NS87 1388 aa24.67■■□□□ 1.54
CCHCR1-228ENST00000509552 HNRNPMP52272 730 aaKnown RBP eCLIP24.67■■□□□ 1.54
CCHCR1-228ENST00000509552 FAM9BQ8IZU0 186 aa24.64■■□□□ 1.53
CCHCR1-228ENST00000509552 UHRF1BP1Q6BDS2 1440 aa24.64■■□□□ 1.53
CCHCR1-228ENST00000509552 ARID4BQ4LE39 1312 aaPredicted RBP24.63■■□□□ 1.53
CCHCR1-228ENST00000509552 RSPH4AQ5TD94 716 aa24.63■■□□□ 1.53
CCHCR1-228ENST00000509552 CCDC141Q6ZP82 1450 aa24.62■■□□□ 1.53
CCHCR1-228ENST00000509552 ARHGEF12Q9NZN5 1544 aa24.62■■□□□ 1.53
CCHCR1-228ENST00000509552 KDM5CP41229 1560 aa24.6■■□□□ 1.53
CCHCR1-228ENST00000509552 PREX2Q70Z35 1606 aa24.6■■□□□ 1.53
CCHCR1-228ENST00000509552 RALGAPBQ86X10 1494 aa24.6■■□□□ 1.53
CCHCR1-228ENST00000509552 SAMD9LQ8IVG5 1584 aa24.58■■□□□ 1.53
CCHCR1-228ENST00000509552 BCORL1Q5H9F3 1711 aa24.57■■□□□ 1.52
CCHCR1-228ENST00000509552 CDC42BPBQ9Y5S2 1711 aa24.57■■□□□ 1.52
CCHCR1-228ENST00000509552 ZBED9Q6R2W3 1325 aa24.56■■□□□ 1.52
CCHCR1-228ENST00000509552 POLR3GLQ9BT43 218 aa24.56■■□□□ 1.52
CCHCR1-228ENST00000509552 CARD11Q9BXL7 1154 aa24.55■■□□□ 1.52
CCHCR1-228ENST00000509552 CHD1O14646 1710 aa24.54■■□□□ 1.52
CCHCR1-228ENST00000509552 ROCK2O75116 1388 aaKnown RBP24.54■■□□□ 1.52
CCHCR1-228ENST00000509552 DHX29Q7Z478 1369 aaKnown RBP24.54■■□□□ 1.52
CCHCR1-228ENST00000509552 ERICH6BQ5W0A0 696 aa24.53■■□□□ 1.52
CCHCR1-228ENST00000509552 FAM135AQ9P2D6 1515 aa24.51■■□□□ 1.51
CCHCR1-228ENST00000509552 KDM2AQ9Y2K7 1162 aa24.5■■□□□ 1.51
CCHCR1-228ENST00000509552 DCAF11Q8TEB1 546 aa24.5■■□□□ 1.51
CCHCR1-228ENST00000509552 SHROOM2Q13796 1616 aa24.5■■□□□ 1.51
CCHCR1-228ENST00000509552 ARHGAP5Q13017 1502 aa24.49■■□□□ 1.51
CCHCR1-228ENST00000509552 IRX6P78412 446 aaPredicted RBP24.48■■□□□ 1.51
CCHCR1-228ENST00000509552 SYCP2Q9BX26 1530 aa24.47■■□□□ 1.51
CCHCR1-228ENST00000509552 MAST1Q9Y2H9 1570 aa24.47■■□□□ 1.51
CCHCR1-228ENST00000509552 TTC37Q6PGP7 1564 aa24.46■■□□□ 1.51
CCHCR1-228ENST00000509552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.45■■□□□ 1.51e-5■■■■□ 25.8
CCHCR1-228ENST00000509552 PLEKHH2Q8IVE3 1493 aa24.44■■□□□ 1.5
CCHCR1-228ENST00000509552 CCDC144AA2RUR9 1427 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms