RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 ARHGEF40Q8TER5 1519 aa20.49■□□□□ 0.87
KDM3B-206ENST00000509468 PTPRMP28827 1452 aa20.49■□□□□ 0.87
KDM3B-206ENST00000509468 CCDC18Q5T9S5 1454 aa20.48■□□□□ 0.87
KDM3B-206ENST00000509468 POGZQ7Z3K3 1410 aa20.47■□□□□ 0.87
KDM3B-206ENST00000509468 ZFYVE16Q7Z3T8 1539 aa20.47■□□□□ 0.87
KDM3B-206ENST00000509468 ARHGAP5Q13017 1502 aa20.43■□□□□ 0.86
KDM3B-206ENST00000509468 YEATS2Q9ULM3 1422 aa20.43■□□□□ 0.86
KDM3B-206ENST00000509468 MADDQ8WXG6 1647 aa20.42■□□□□ 0.86
KDM3B-206ENST00000509468 PCF11O94913 1555 aaKnown RBP20.42■□□□□ 0.86
KDM3B-206ENST00000509468 ATP10AO60312 1499 aa20.41■□□□□ 0.86
KDM3B-206ENST00000509468 FYCO1Q9BQS8 1478 aa20.4■□□□□ 0.86
KDM3B-206ENST00000509468 CDC42BPBQ9Y5S2 1711 aa20.39■□□□□ 0.86
KDM3B-206ENST00000509468 ZNF518AQ6AHZ1 1483 aa20.39■□□□□ 0.85
KDM3B-206ENST00000509468 AFAP1Q8N556 730 aa20.39■□□□□ 0.85
KDM3B-206ENST00000509468 MYT1LQ9UL68 1186 aa20.39■□□□□ 0.85
KDM3B-206ENST00000509468 MLECQ14165 292 aa20.37■□□□□ 0.85
KDM3B-206ENST00000509468 RIMS1Q86UR5 1692 aaKnown RBP20.37■□□□□ 0.85
KDM3B-206ENST00000509468 C9orf84Q5VXU9 1444 aa20.35■□□□□ 0.85
KDM3B-206ENST00000509468 PREX2Q70Z35 1606 aa20.34■□□□□ 0.85
KDM3B-206ENST00000509468 SIGLEC1Q9BZZ2 1709 aa20.33■□□□□ 0.85
KDM3B-206ENST00000509468 CDC42BPAQ5VT25 1732 aa20.31■□□□□ 0.84
KDM3B-206ENST00000509468 KDM5CP41229 1560 aa20.31■□□□□ 0.84
KDM3B-206ENST00000509468 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
KDM3B-206ENST00000509468 ILDR1Q86SU0 546 aaPredicted RBP20.3■□□□□ 0.84
KDM3B-206ENST00000509468 MLH3Q9UHC1 1453 aa20.3■□□□□ 0.84
KDM3B-206ENST00000509468 FER1L4A9Z1Z3 1794 aa20.29■□□□□ 0.84
KDM3B-206ENST00000509468 ZNF777Q9ULD5 760 aaPredicted RBP20.28■□□□□ 0.84
KDM3B-206ENST00000509468 ABCC1P33527 1531 aa20.27■□□□□ 0.83
KDM3B-206ENST00000509468 TRAPPC8Q9Y2L5 1435 aa20.26■□□□□ 0.83
KDM3B-206ENST00000509468 ITSN2Q9NZM3 1697 aa20.26■□□□□ 0.83
KDM3B-206ENST00000509468 ARHGEF12Q9NZN5 1544 aa20.25■□□□□ 0.83
KDM3B-206ENST00000509468 GPATCH8Q9UKJ3 1502 aaKnown RBP20.25■□□□□ 0.83
KDM3B-206ENST00000509468 LMTK3Q96Q04 1460 aa20.24■□□□□ 0.83
KDM3B-206ENST00000509468 CFDP1Q9UEE9 299 aaPredicted RBP20.24■□□□□ 0.83
KDM3B-206ENST00000509468 MTUS2Q5JR59 1369 aa20.23■□□□□ 0.83
KDM3B-206ENST00000509468 REREQ9P2R6 1566 aa20.23■□□□□ 0.83
KDM3B-206ENST00000509468 DIP2CQ9Y2E4 1556 aa20.22■□□□□ 0.83
KDM3B-206ENST00000509468 CCNB3Q8WWL7 1395 aa20.21■□□□□ 0.83
KDM3B-206ENST00000509468 HNRNPMP52272 730 aaKnown RBP eCLIP20.21■□□□□ 0.83
KDM3B-206ENST00000509468 ESF1Q9H501 851 aaKnown RBP20.21■□□□□ 0.83
KDM3B-206ENST00000509468 CEP162Q5TB80 1403 aa20.19■□□□□ 0.82
KDM3B-206ENST00000509468 PLEKHH2Q8IVE3 1493 aa20.19■□□□□ 0.82
KDM3B-206ENST00000509468 ABCA6Q8N139 1617 aa20.19■□□□□ 0.82
KDM3B-206ENST00000509468 KIAA1107Q9UPP5 1409 aa20.19■□□□□ 0.82
KDM3B-206ENST00000509468 KIDINS220Q9ULH0 1771 aa20.18■□□□□ 0.82
KDM3B-206ENST00000509468 SAMD9LQ8IVG5 1584 aa20.18■□□□□ 0.82
KDM3B-206ENST00000509468 SPAG9O60271 1321 aaKnown RBP20.18■□□□□ 0.82
KDM3B-206ENST00000509468 AGLP35573 1532 aa20.17■□□□□ 0.82
KDM3B-206ENST00000509468 CEBPAP49715 358 aaPredicted RBP20.17■□□□□ 0.82
KDM3B-206ENST00000509468 HSPA2P54652 639 aa20.17■□□□□ 0.82
KDM3B-206ENST00000509468 SETD1BQ9UPS6 1966 aaKnown RBP20.16■□□□□ 0.82
KDM3B-206ENST00000509468 SYCP2Q9BX26 1530 aa20.14■□□□□ 0.81
KDM3B-206ENST00000509468 PREX1Q8TCU6 1659 aa20.13■□□□□ 0.81
KDM3B-206ENST00000509468 EHBP1L1Q8N3D4 1523 aa20.12■□□□□ 0.81
KDM3B-206ENST00000509468 LOC105371045A0A1W2PR82 267 aa20.11■□□□□ 0.81
KDM3B-206ENST00000509468 FBXO41Q8TF61 875 aa20.1■□□□□ 0.81
KDM3B-206ENST00000509468 CNTLNQ9NXG0 1405 aa20.09■□□□□ 0.81
KDM3B-206ENST00000509468 ATP7AQ04656 1500 aa20.07■□□□□ 0.8
KDM3B-206ENST00000509468 C3P01024 1663 aa20.07■□□□□ 0.8
KDM3B-206ENST00000509468 DMRT2Q9Y5R5 561 aa20.07■□□□□ 0.8
KDM3B-206ENST00000509468 TIAM1Q13009 1591 aa20.07■□□□□ 0.8
KDM3B-206ENST00000509468 ZNF644Q9H582 1327 aaPredicted RBP20.06■□□□□ 0.8
KDM3B-206ENST00000509468 RSPH4AQ5TD94 716 aa20.06■□□□□ 0.8
KDM3B-206ENST00000509468 UHRF1BP1Q6BDS2 1440 aa20.06■□□□□ 0.8
KDM3B-206ENST00000509468 SUPT6HQ7KZ85 1726 aaKnown RBP20.06■□□□□ 0.8
KDM3B-206ENST00000509468 A2MP01023 1474 aa20.04■□□□□ 0.8
KDM3B-206ENST00000509468 INO80Q9ULG1 1556 aaPredicted RBP20.04■□□□□ 0.8
KDM3B-206ENST00000509468 PPP6R1Q9UPN7 881 aa20.03■□□□□ 0.8
KDM3B-206ENST00000509468 ADGBQ8N7X0 1667 aa20.01■□□□□ 0.79
KDM3B-206ENST00000509468 NCOA2Q15596 1464 aa20.01■□□□□ 0.79
KDM3B-206ENST00000509468 MBD5Q9P267 1494 aa20.01■□□□□ 0.79
KDM3B-206ENST00000509468 ZMYM3Q14202 1370 aa20.01■□□□□ 0.79
KDM3B-206ENST00000509468 RTEL1-TNFRSF6BF6WH68 1400 aa20.01■□□□□ 0.79
KDM3B-206ENST00000509468 GGT6Q6P531 493 aa20■□□□□ 0.79
KDM3B-206ENST00000509468 VPS8Q8N3P4 1428 aa20■□□□□ 0.79
KDM3B-206ENST00000509468 MROH2AA6NES4 1674 aa20■□□□□ 0.79
KDM3B-206ENST00000509468 PLXNC1O60486 1568 aa19.98■□□□□ 0.79
KDM3B-206ENST00000509468 STRCQ7RTU9 1775 aa19.96■□□□□ 0.79
KDM3B-206ENST00000509468 NPATQ14207 1427 aa19.96■□□□□ 0.79
KDM3B-206ENST00000509468 LRRC9Q6ZRR7 1453 aa19.95■□□□□ 0.78
KDM3B-206ENST00000509468 TSPY4P0CV99 314 aa19.95■□□□□ 0.78
KDM3B-206ENST00000509468 TSPY10P0CW01 314 aa19.95■□□□□ 0.78
KDM3B-206ENST00000509468 CERKQ8TCT0 537 aa19.95■□□□□ 0.78
KDM3B-206ENST00000509468 DHX29Q7Z478 1369 aaKnown RBP19.95■□□□□ 0.78
KDM3B-206ENST00000509468 CLTCQ00610 1675 aaKnown RBP19.94■□□□□ 0.78
KDM3B-206ENST00000509468 MAP3K1Q13233 1512 aa19.93■□□□□ 0.78
KDM3B-206ENST00000509468 CAMSAP2Q08AD1 1489 aa19.92■□□□□ 0.78
KDM3B-206ENST00000509468 CCDC141Q6ZP82 1450 aa19.92■□□□□ 0.78
KDM3B-206ENST00000509468 APLP2Q06481 763 aa19.9■□□□□ 0.78
KDM3B-206ENST00000509468 PTPRTO14522 1441 aa19.89■□□□□ 0.77
KDM3B-206ENST00000509468 KIF3BO15066 747 aa19.89■□□□□ 0.77
KDM3B-206ENST00000509468 ARHGEF5Q12774 1597 aa19.89■□□□□ 0.77
KDM3B-206ENST00000509468 KANK4Q5T7N3 995 aaPredicted RBP19.89■□□□□ 0.77
KDM3B-206ENST00000509468 PTPRKQ15262 1439 aa19.86■□□□□ 0.77
KDM3B-206ENST00000509468 MIA2Q96PC5 1412 aa19.84■□□□□ 0.77
KDM3B-206ENST00000509468 WASHC2CQ9Y4E1 1318 aa19.83■□□□□ 0.77
KDM3B-206ENST00000509468 NCOA1Q15788 1441 aa19.83■□□□□ 0.76
KDM3B-206ENST00000509468 CAMSAP1Q5T5Y3 1602 aa19.83■□□□□ 0.76
KDM3B-206ENST00000509468 MYOM3Q5VTT5 1437 aa19.81■□□□□ 0.76
KDM3B-206ENST00000509468 PKD2Q13563 968 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms