RNA–Protein interactions for RNA: ENST00000509415.5

CALCOCO2-214, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-214ENST00000509415 MAGI2Q86UL8 1455 aa17.47■□□□□ 0.39
CALCOCO2-214ENST00000509415 POGZQ7Z3K3 1410 aa17.45■□□□□ 0.38
CALCOCO2-214ENST00000509415 SCAPERQ9BY12 1400 aa17.45■□□□□ 0.38
CALCOCO2-214ENST00000509415 TROQ12816 1431 aaPredicted RBP17.44■□□□□ 0.38
CALCOCO2-214ENST00000509415 YEATS2Q9ULM3 1422 aa17.44■□□□□ 0.38
CALCOCO2-214ENST00000509415 CDC42BPBQ9Y5S2 1711 aa17.44■□□□□ 0.38
CALCOCO2-214ENST00000509415 FER1L4A9Z1Z3 1794 aa17.43■□□□□ 0.38
CALCOCO2-214ENST00000509415 PCF11O94913 1555 aaKnown RBP17.42■□□□□ 0.38
CALCOCO2-214ENST00000509415 CLIP1P30622 1438 aa17.42■□□□□ 0.38
CALCOCO2-214ENST00000509415 ILDR1Q86SU0 546 aaPredicted RBP17.42■□□□□ 0.38
CALCOCO2-214ENST00000509415 EFCAB2Q5VUJ9 269 aa17.41■□□□□ 0.38
CALCOCO2-214ENST00000509415 CCDC18Q5T9S5 1454 aa17.4■□□□□ 0.38
CALCOCO2-214ENST00000509415 ARHGAP5Q13017 1502 aa17.4■□□□□ 0.38
CALCOCO2-214ENST00000509415 CASKIN1Q8WXD9 1431 aa17.39■□□□□ 0.38
CALCOCO2-214ENST00000509415 PREX2Q70Z35 1606 aa17.39■□□□□ 0.37
CALCOCO2-214ENST00000509415 KDM5CP41229 1560 aa17.37■□□□□ 0.37
CALCOCO2-214ENST00000509415 ATP10AO60312 1499 aa17.37■□□□□ 0.37
CALCOCO2-214ENST00000509415 ZNF518AQ6AHZ1 1483 aa17.37■□□□□ 0.37
CALCOCO2-214ENST00000509415 CDC42BPAQ5VT25 1732 aa17.36■□□□□ 0.37
CALCOCO2-214ENST00000509415 LMTK3Q96Q04 1460 aa17.36■□□□□ 0.37
CALCOCO2-214ENST00000509415 C9orf84Q5VXU9 1444 aa17.35■□□□□ 0.37
CALCOCO2-214ENST00000509415 FYCO1Q9BQS8 1478 aa17.34■□□□□ 0.37
CALCOCO2-214ENST00000509415 ITSN2Q9NZM3 1697 aa17.34■□□□□ 0.37
CALCOCO2-214ENST00000509415 ARHGEF12Q9NZN5 1544 aa17.32■□□□□ 0.36
CALCOCO2-214ENST00000509415 ABCC1P33527 1531 aa17.31■□□□□ 0.36
CALCOCO2-214ENST00000509415 DIP2CQ9Y2E4 1556 aa17.31■□□□□ 0.36
CALCOCO2-214ENST00000509415 MLECQ14165 292 aa17.3■□□□□ 0.36
CALCOCO2-214ENST00000509415 ABCA6Q8N139 1617 aa17.29■□□□□ 0.36
CALCOCO2-214ENST00000509415 REREQ9P2R6 1566 aa17.29■□□□□ 0.36
CALCOCO2-214ENST00000509415 AFAP1Q8N556 730 aa17.29■□□□□ 0.36
CALCOCO2-214ENST00000509415 PREX1Q8TCU6 1659 aa17.28■□□□□ 0.36
CALCOCO2-214ENST00000509415 SETD1BQ9UPS6 1966 aaKnown RBP17.28■□□□□ 0.36
CALCOCO2-214ENST00000509415 MLH3Q9UHC1 1453 aa17.27■□□□□ 0.36
CALCOCO2-214ENST00000509415 KIDINS220Q9ULH0 1771 aa17.26■□□□□ 0.35
CALCOCO2-214ENST00000509415 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
CALCOCO2-214ENST00000509415 TRAPPC8Q9Y2L5 1435 aa17.24■□□□□ 0.35
CALCOCO2-214ENST00000509415 MYT1LQ9UL68 1186 aa17.24■□□□□ 0.35
CALCOCO2-214ENST00000509415 SAMD9LQ8IVG5 1584 aa17.23■□□□□ 0.35
CALCOCO2-214ENST00000509415 AGLP35573 1532 aa17.21■□□□□ 0.35
CALCOCO2-214ENST00000509415 C3P01024 1663 aa17.21■□□□□ 0.35
CALCOCO2-214ENST00000509415 HSPA2P54652 639 aa17.21■□□□□ 0.35
CALCOCO2-214ENST00000509415 FBXO41Q8TF61 875 aa17.19■□□□□ 0.34
CALCOCO2-214ENST00000509415 SYCP2Q9BX26 1530 aa17.19■□□□□ 0.34
CALCOCO2-214ENST00000509415 GPATCH8Q9UKJ3 1502 aaKnown RBP17.19■□□□□ 0.34
CALCOCO2-214ENST00000509415 CEBPAP49715 358 aaPredicted RBP17.15■□□□□ 0.34
CALCOCO2-214ENST00000509415 ZNF777Q9ULD5 760 aaPredicted RBP17.15■□□□□ 0.34
CALCOCO2-214ENST00000509415 SUPT6HQ7KZ85 1726 aaKnown RBP17.15■□□□□ 0.34
CALCOCO2-214ENST00000509415 STRCQ7RTU9 1775 aa17.15■□□□□ 0.34
CALCOCO2-214ENST00000509415 PLEKHH2Q8IVE3 1493 aa17.14■□□□□ 0.33
CALCOCO2-214ENST00000509415 MROH2AA6NES4 1674 aa17.13■□□□□ 0.33
CALCOCO2-214ENST00000509415 INO80Q9ULG1 1556 aaPredicted RBP17.13■□□□□ 0.33
CALCOCO2-214ENST00000509415 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
CALCOCO2-214ENST00000509415 CCNB3Q8WWL7 1395 aa17.13■□□□□ 0.33
CALCOCO2-214ENST00000509415 KIAA1107Q9UPP5 1409 aa17.13■□□□□ 0.33
CALCOCO2-214ENST00000509415 ATP7AQ04656 1500 aa17.12■□□□□ 0.33
CALCOCO2-214ENST00000509415 EHBP1L1Q8N3D4 1523 aa17.12■□□□□ 0.33
CALCOCO2-214ENST00000509415 UHRF1BP1Q6BDS2 1440 aa17.12■□□□□ 0.33
CALCOCO2-214ENST00000509415 TIAM1Q13009 1591 aa17.11■□□□□ 0.33
CALCOCO2-214ENST00000509415 CFDP1Q9UEE9 299 aaPredicted RBP17.11■□□□□ 0.33
CALCOCO2-214ENST00000509415 HNRNPMP52272 730 aaKnown RBP eCLIP17.1■□□□□ 0.33
CALCOCO2-214ENST00000509415 ESF1Q9H501 851 aaKnown RBP17.1■□□□□ 0.33
CALCOCO2-214ENST00000509415 SPAG9O60271 1321 aaKnown RBP17.1■□□□□ 0.33
CALCOCO2-214ENST00000509415 CEP162Q5TB80 1403 aa17.1■□□□□ 0.33
CALCOCO2-214ENST00000509415 CNTLNQ9NXG0 1405 aa17.1■□□□□ 0.33
CALCOCO2-214ENST00000509415 ADGBQ8N7X0 1667 aa17.1■□□□□ 0.33
CALCOCO2-214ENST00000509415 PLXNC1O60486 1568 aa17.09■□□□□ 0.33
CALCOCO2-214ENST00000509415 CLTCQ00610 1675 aaKnown RBP17.07■□□□□ 0.32
CALCOCO2-214ENST00000509415 PHF23Q9BUL5 403 aaPredicted RBP17.06■□□□□ 0.32
CALCOCO2-214ENST00000509415 A2MP01023 1474 aa17.05■□□□□ 0.32
CALCOCO2-214ENST00000509415 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
CALCOCO2-214ENST00000509415 CERKQ8TCT0 537 aa17.02■□□□□ 0.32
CALCOCO2-214ENST00000509415 MBD5Q9P267 1494 aa17.01■□□□□ 0.31
CALCOCO2-214ENST00000509415 NPATQ14207 1427 aa17.01■□□□□ 0.31
CALCOCO2-214ENST00000509415 ZNF644Q9H582 1327 aaPredicted RBP17■□□□□ 0.31
CALCOCO2-214ENST00000509415 ZNF142P52746 1687 aaPredicted RBP16.99■□□□□ 0.31
CALCOCO2-214ENST00000509415 ZMYM3Q14202 1370 aa16.99■□□□□ 0.31
CALCOCO2-214ENST00000509415 NCOA2Q15596 1464 aa16.99■□□□□ 0.31
CALCOCO2-214ENST00000509415 RTEL1-TNFRSF6BF6WH68 1400 aa16.98■□□□□ 0.31
CALCOCO2-214ENST00000509415 PTPRTO14522 1441 aa16.97■□□□□ 0.31
CALCOCO2-214ENST00000509415 MYO3AQ8NEV4 1616 aa16.97■□□□□ 0.31
CALCOCO2-214ENST00000509415 CAMSAP2Q08AD1 1489 aa16.96■□□□□ 0.31
CALCOCO2-214ENST00000509415 CAMSAP1Q5T5Y3 1602 aa16.96■□□□□ 0.3
CALCOCO2-214ENST00000509415 NCOA1Q15788 1441 aa16.96■□□□□ 0.3
CALCOCO2-214ENST00000509415 CCDC141Q6ZP82 1450 aa16.95■□□□□ 0.3
CALCOCO2-214ENST00000509415 GGT6Q6P531 493 aa16.94■□□□□ 0.3
CALCOCO2-214ENST00000509415 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
CALCOCO2-214ENST00000509415 VPS8Q8N3P4 1428 aa16.93■□□□□ 0.3
CALCOCO2-214ENST00000509415 ARHGEF5Q12774 1597 aa16.93■□□□□ 0.3
CALCOCO2-214ENST00000509415 DHX29Q7Z478 1369 aaKnown RBP16.92■□□□□ 0.3
CALCOCO2-214ENST00000509415 PTPRKQ15262 1439 aa16.92■□□□□ 0.3
CALCOCO2-214ENST00000509415 CEP170BQ9Y4F5 1589 aaPredicted RBP16.92■□□□□ 0.3
CALCOCO2-214ENST00000509415 LRRC9Q6ZRR7 1453 aa16.91■□□□□ 0.3
CALCOCO2-214ENST00000509415 RSPH4AQ5TD94 716 aa16.9■□□□□ 0.3
CALCOCO2-214ENST00000509415 LTBP4Q8N2S1 1624 aa16.89■□□□□ 0.29
CALCOCO2-214ENST00000509415 FAM135AQ9P2D6 1515 aa16.89■□□□□ 0.29
CALCOCO2-214ENST00000509415 MAP3K1Q13233 1512 aa16.88■□□□□ 0.29
CALCOCO2-214ENST00000509415 LOC105371045A0A1W2PR82 267 aa16.88■□□□□ 0.29
CALCOCO2-214ENST00000509415 PLA2R1Q13018 1463 aa16.87■□□□□ 0.29
CALCOCO2-214ENST00000509415 KDM5DQ9BY66 1539 aa16.86■□□□□ 0.29
CALCOCO2-214ENST00000509415 MAST1Q9Y2H9 1570 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms