RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 MYO5CQ9NQX4 1742 aa25.24■■□□□ 1.63
SMAD5-205ENST00000509297 CLIP1P30622 1438 aa25.24■■□□□ 1.63
SMAD5-205ENST00000509297 MADDQ8WXG6 1647 aa25.23■■□□□ 1.63
SMAD5-205ENST00000509297 CASKIN1Q8WXD9 1431 aa25.23■■□□□ 1.63
SMAD5-205ENST00000509297 YEATS2Q9ULM3 1422 aa25.21■■□□□ 1.63
SMAD5-205ENST00000509297 CCDC18Q5T9S5 1454 aa25.2■■□□□ 1.62
SMAD5-205ENST00000509297 LRRIQ1Q96JM4 1722 aa25.19■■□□□ 1.62
SMAD5-205ENST00000509297 PCF11O94913 1555 aaKnown RBP25.15■■□□□ 1.62
SMAD5-205ENST00000509297 ZNF518AQ6AHZ1 1483 aa25.15■■□□□ 1.62
SMAD5-205ENST00000509297 ARHGAP5Q13017 1502 aa25.14■■□□□ 1.62
SMAD5-205ENST00000509297 ATP10AO60312 1499 aa25.13■■□□□ 1.61
SMAD5-205ENST00000509297 FYCO1Q9BQS8 1478 aa25.13■■□□□ 1.61
SMAD5-205ENST00000509297 SIGLEC1Q9BZZ2 1709 aa25.12■■□□□ 1.61
SMAD5-205ENST00000509297 ILDR1Q86SU0 546 aaPredicted RBP25.12■■□□□ 1.61
SMAD5-205ENST00000509297 RIMS1Q86UR5 1692 aaKnown RBP25.1■■□□□ 1.61
SMAD5-205ENST00000509297 KDM5CP41229 1560 aa25.1■■□□□ 1.61
SMAD5-205ENST00000509297 C9orf84Q5VXU9 1444 aa25.1■■□□□ 1.61
SMAD5-205ENST00000509297 LMTK3Q96Q04 1460 aa25.08■■□□□ 1.6
SMAD5-205ENST00000509297 PREX2Q70Z35 1606 aa25.06■■□□□ 1.6
SMAD5-205ENST00000509297 CDC42BPBQ9Y5S2 1711 aa25.06■■□□□ 1.6
SMAD5-205ENST00000509297 AFAP1Q8N556 730 aa25.05■■□□□ 1.6
SMAD5-205ENST00000509297 ARHGEF12Q9NZN5 1544 aa25.04■■□□□ 1.6
SMAD5-205ENST00000509297 MLH3Q9UHC1 1453 aa25.03■■□□□ 1.6
SMAD5-205ENST00000509297 REREQ9P2R6 1566 aa25.01■■□□□ 1.59
SMAD5-205ENST00000509297 ABCC1P33527 1531 aa25.01■■□□□ 1.59
SMAD5-205ENST00000509297 MLECQ14165 292 aa25■■□□□ 1.59
SMAD5-205ENST00000509297 FER1L4A9Z1Z3 1794 aa25■■□□□ 1.59
SMAD5-205ENST00000509297 DIP2CQ9Y2E4 1556 aa24.97■■□□□ 1.59
SMAD5-205ENST00000509297 TRAPPC8Q9Y2L5 1435 aa24.96■■□□□ 1.59
SMAD5-205ENST00000509297 CDC42BPAQ5VT25 1732 aa24.96■■□□□ 1.59
SMAD5-205ENST00000509297 ITSN2Q9NZM3 1697 aa24.94■■□□□ 1.58
SMAD5-205ENST00000509297 AGLP35573 1532 aa24.92■■□□□ 1.58
SMAD5-205ENST00000509297 GPATCH8Q9UKJ3 1502 aaKnown RBP24.92■■□□□ 1.58
SMAD5-205ENST00000509297 ABCA6Q8N139 1617 aa24.92■■□□□ 1.58
SMAD5-205ENST00000509297 MYT1LQ9UL68 1186 aa24.91■■□□□ 1.58
SMAD5-205ENST00000509297 PLPPR3Q6T4P5 718 aa24.87■■□□□ 1.57
SMAD5-205ENST00000509297 KIAA1107Q9UPP5 1409 aa24.86■■□□□ 1.57
SMAD5-205ENST00000509297 KIDINS220Q9ULH0 1771 aa24.86■■□□□ 1.57
SMAD5-205ENST00000509297 SAMD9LQ8IVG5 1584 aa24.86■■□□□ 1.57
SMAD5-205ENST00000509297 HSPA2P54652 639 aa24.86■■□□□ 1.57
SMAD5-205ENST00000509297 PLEKHH2Q8IVE3 1493 aa24.85■■□□□ 1.57
SMAD5-205ENST00000509297 MTUS2Q5JR59 1369 aa24.83■■□□□ 1.57
SMAD5-205ENST00000509297 FBXO41Q8TF61 875 aa24.83■■□□□ 1.57
SMAD5-205ENST00000509297 CCNB3Q8WWL7 1395 aa24.82■■□□□ 1.56
SMAD5-205ENST00000509297 PREX1Q8TCU6 1659 aa24.82■■□□□ 1.56
SMAD5-205ENST00000509297 CFDP1Q9UEE9 299 aaPredicted RBP24.82■■□□□ 1.56
SMAD5-205ENST00000509297 ZNF777Q9ULD5 760 aaPredicted RBP24.82■■□□□ 1.56
SMAD5-205ENST00000509297 SYCP2Q9BX26 1530 aa24.81■■□□□ 1.56
SMAD5-205ENST00000509297 CEP162Q5TB80 1403 aa24.8■■□□□ 1.56
SMAD5-205ENST00000509297 CEBPAP49715 358 aaPredicted RBP24.8■■□□□ 1.56
SMAD5-205ENST00000509297 SPAG9O60271 1321 aaKnown RBP24.79■■□□□ 1.56
SMAD5-205ENST00000509297 CNTLNQ9NXG0 1405 aa24.78■■□□□ 1.56
SMAD5-205ENST00000509297 EHBP1L1Q8N3D4 1523 aa24.77■■□□□ 1.56
SMAD5-205ENST00000509297 HNRNPMP52272 730 aaKnown RBP eCLIP24.77■■□□□ 1.563e-6■■■■■ 28.4
SMAD5-205ENST00000509297 SETD1BQ9UPS6 1966 aaKnown RBP24.76■■□□□ 1.55
SMAD5-205ENST00000509297 ESF1Q9H501 851 aaKnown RBP24.75■■□□□ 1.55
SMAD5-205ENST00000509297 UHRF1BP1Q6BDS2 1440 aa24.75■■□□□ 1.55
SMAD5-205ENST00000509297 ATP7AQ04656 1500 aa24.74■■□□□ 1.55
SMAD5-205ENST00000509297 INO80Q9ULG1 1556 aaPredicted RBP24.73■■□□□ 1.55
SMAD5-205ENST00000509297 C3P01024 1663 aa24.72■■□□□ 1.55
SMAD5-205ENST00000509297 TIAM1Q13009 1591 aa24.72■■□□□ 1.55
SMAD5-205ENST00000509297 PLXNC1O60486 1568 aa24.7■■□□□ 1.54
SMAD5-205ENST00000509297 MBD5Q9P267 1494 aa24.68■■□□□ 1.54
SMAD5-205ENST00000509297 A2MP01023 1474 aa24.67■■□□□ 1.54
SMAD5-205ENST00000509297 DMRT2Q9Y5R5 561 aa24.67■■□□□ 1.54
SMAD5-205ENST00000509297 MROH2AA6NES4 1674 aa24.66■■□□□ 1.54
SMAD5-205ENST00000509297 NPATQ14207 1427 aa24.65■■□□□ 1.54
SMAD5-205ENST00000509297 ZNF644Q9H582 1327 aaPredicted RBP24.64■■□□□ 1.54
SMAD5-205ENST00000509297 RTEL1-TNFRSF6BF6WH68 1400 aa24.64■■□□□ 1.54
SMAD5-205ENST00000509297 STRCQ7RTU9 1775 aa24.62■■□□□ 1.53
SMAD5-205ENST00000509297 SUPT6HQ7KZ85 1726 aaKnown RBP24.61■■□□□ 1.53
SMAD5-205ENST00000509297 PPP6R1Q9UPN7 881 aa24.61■■□□□ 1.53
SMAD5-205ENST00000509297 ZMYM3Q14202 1370 aa24.61■■□□□ 1.53
SMAD5-205ENST00000509297 NCOA2Q15596 1464 aa24.61■■□□□ 1.53
SMAD5-205ENST00000509297 ADGBQ8N7X0 1667 aa24.61■■□□□ 1.53
SMAD5-205ENST00000509297 CERKQ8TCT0 537 aa24.6■■□□□ 1.53
SMAD5-205ENST00000509297 RSPH4AQ5TD94 716 aa24.58■■□□□ 1.53
SMAD5-205ENST00000509297 VPS8Q8N3P4 1428 aa24.58■■□□□ 1.53
SMAD5-205ENST00000509297 PTPRTO14522 1441 aa24.57■■□□□ 1.52
SMAD5-205ENST00000509297 CCDC141Q6ZP82 1450 aa24.55■■□□□ 1.52
SMAD5-205ENST00000509297 DHX29Q7Z478 1369 aaKnown RBP24.54■■□□□ 1.52
SMAD5-205ENST00000509297 CAMSAP2Q08AD1 1489 aa24.53■■□□□ 1.52
SMAD5-205ENST00000509297 CLTCQ00610 1675 aaKnown RBP24.53■■□□□ 1.52
SMAD5-205ENST00000509297 NCOA1Q15788 1441 aa24.52■■□□□ 1.52
SMAD5-205ENST00000509297 GGT6Q6P531 493 aa24.52■■□□□ 1.52
SMAD5-205ENST00000509297 LRRC9Q6ZRR7 1453 aa24.51■■□□□ 1.51
SMAD5-205ENST00000509297 MAP3K1Q13233 1512 aa24.51■■□□□ 1.51
SMAD5-205ENST00000509297 LOC105371045A0A1W2PR82 267 aa24.51■■□□□ 1.51
SMAD5-205ENST00000509297 PTPRKQ15262 1439 aa24.51■■□□□ 1.51
SMAD5-205ENST00000509297 ARHGEF5Q12774 1597 aa24.49■■□□□ 1.51
SMAD5-205ENST00000509297 FAM135AQ9P2D6 1515 aa24.47■■□□□ 1.51
SMAD5-205ENST00000509297 ZNF142P52746 1687 aaPredicted RBP24.44■■□□□ 1.5
SMAD5-205ENST00000509297 CAMSAP1Q5T5Y3 1602 aa24.44■■□□□ 1.5
SMAD5-205ENST00000509297 MYO3AQ8NEV4 1616 aa24.43■■□□□ 1.5
SMAD5-205ENST00000509297 TSPY4P0CV99 314 aa24.42■■□□□ 1.5
SMAD5-205ENST00000509297 TSPY10P0CW01 314 aa24.42■■□□□ 1.5
SMAD5-205ENST00000509297 PLA2R1Q13018 1463 aa24.42■■□□□ 1.5
SMAD5-205ENST00000509297 CEP170BQ9Y4F5 1589 aaPredicted RBP24.41■■□□□ 1.5
SMAD5-205ENST00000509297 KIF3BO15066 747 aa24.4■■□□□ 1.5
SMAD5-205ENST00000509297 MIA2Q96PC5 1412 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms