RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 MKRN3Q13064 507 aaKnown RBP14.23□□□□□ -0.13
GYPB-210ENST00000508841 SPNS2Q8IVW8 549 aa14.22□□□□□ -0.13
GYPB-210ENST00000508841 FBXO22Q8NEZ5 403 aa14.21□□□□□ -0.13
GYPB-210ENST00000508841 PHF8Q9UPP1 1060 aa14.19□□□□□ -0.14
GYPB-210ENST00000508841 MARVELD3Q96A59 401 aa14.18□□□□□ -0.14
GYPB-210ENST00000508841 BCANQ96GW7 911 aa14.15□□□□□ -0.14
GYPB-210ENST00000508841 C3orf67Q6ZVT6 689 aa14.08□□□□□ -0.16
GYPB-210ENST00000508841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.07□□□□□ -0.16
GYPB-210ENST00000508841 ILDR1Q86SU0 546 aaPredicted RBP14.06□□□□□ -0.16
GYPB-210ENST00000508841 MS4A4AQ96JQ5 239 aa14.06□□□□□ -0.16
GYPB-210ENST00000508841 PPP1R37O75864 691 aa14.05□□□□□ -0.16
GYPB-210ENST00000508841 PDCD7Q8N8D1 485 aaKnown RBP14.05□□□□□ -0.16
GYPB-210ENST00000508841 EMP3P54852 163 aa14.04□□□□□ -0.16
GYPB-210ENST00000508841 WDR70Q9NW82 654 aa14.03□□□□□ -0.16
GYPB-210ENST00000508841 L3MBTL3Q96JM7 780 aaPredicted RBP14.02□□□□□ -0.17
GYPB-210ENST00000508841 CADPS2Q86UW7 1296 aa13.99□□□□□ -0.17
GYPB-210ENST00000508841 P3H3Q8IVL6 736 aa13.99□□□□□ -0.17
GYPB-210ENST00000508841 HS3ST6Q96QI5 342 aa13.95□□□□□ -0.18
GYPB-210ENST00000508841 FAM205CA6NFA0 338 aa13.94□□□□□ -0.18
GYPB-210ENST00000508841 NBR1Q14596 966 aa13.94□□□□□ -0.18
GYPB-210ENST00000508841 PDE4AP27815 886 aa13.93□□□□□ -0.18
GYPB-210ENST00000508841 KRTAP3-3Q9BYR6 98 aa13.93□□□□□ -0.18
GYPB-210ENST00000508841 KRTAP3-2Q9BYR7 98 aa13.93□□□□□ -0.18
GYPB-210ENST00000508841 POTEB3A0JP26 581 aa13.91□□□□□ -0.18
GYPB-210ENST00000508841 POTEBQ6S5H4 581 aa13.91□□□□□ -0.18
GYPB-210ENST00000508841 G3V3G9 751 aa13.89□□□□□ -0.19
GYPB-210ENST00000508841 CRISPLD2Q9H0B8 497 aa13.86□□□□□ -0.19
GYPB-210ENST00000508841 MICALL2Q8IY33 904 aa13.84□□□□□ -0.19
GYPB-210ENST00000508841 NCKAP5LQ9HCH0 1330 aa13.84□□□□□ -0.19
GYPB-210ENST00000508841 MFSD10Q14728 455 aa13.83□□□□□ -0.2
GYPB-210ENST00000508841 BOLA1Q9Y3E2 137 aa13.83□□□□□ -0.2
GYPB-210ENST00000508841 DPY19L2Q6NUT2 758 aa13.82□□□□□ -0.2
GYPB-210ENST00000508841 LARP6Q9BRS8 491 aaKnown RBP13.82□□□□□ -0.2
GYPB-210ENST00000508841 E2F4Q16254 413 aa13.81□□□□□ -0.2
GYPB-210ENST00000508841 DDX27Q96GQ7 796 aaKnown RBP13.81□□□□□ -0.2
GYPB-210ENST00000508841 KCNV2Q8TDN2 545 aa13.78□□□□□ -0.2
GYPB-210ENST00000508841 GPHNQ9NQX3 736 aaPredicted RBP13.78□□□□□ -0.2
GYPB-210ENST00000508841 ARHGEF1Q92888 912 aaKnown RBP13.76□□□□□ -0.21
GYPB-210ENST00000508841 HOXB3P14651 431 aaPredicted RBP13.75□□□□□ -0.21
GYPB-210ENST00000508841 TMC2Q8TDI7 906 aa13.75□□□□□ -0.21
GYPB-210ENST00000508841 ZNF710Q8N1W2 664 aa13.73□□□□□ -0.21
GYPB-210ENST00000508841 PPP1R15BQ5SWA1 713 aa13.71□□□□□ -0.21
GYPB-210ENST00000508841 HOXB1P14653 301 aaPredicted RBP13.7□□□□□ -0.22
GYPB-210ENST00000508841 CAMK2BQ13554 666 aa13.69□□□□□ -0.22
GYPB-210ENST00000508841 ERBB3P21860 1342 aa13.68□□□□□ -0.22
GYPB-210ENST00000508841 ARIH1Q9Y4X5 557 aaPredicted RBP13.68□□□□□ -0.22
GYPB-210ENST00000508841 FOXK1P85037 733 aa13.67□□□□□ -0.22
GYPB-210ENST00000508841 DOK7Q18PE1 504 aa13.67□□□□□ -0.22
GYPB-210ENST00000508841 TULP1O00294 542 aaPredicted RBP13.63□□□□□ -0.23
GYPB-210ENST00000508841 KIF3CO14782 793 aa13.62□□□□□ -0.23
GYPB-210ENST00000508841 DSG2Q14126 1118 aa13.62□□□□□ -0.23
GYPB-210ENST00000508841 RNF166Q96A37 237 aaPredicted RBP13.62□□□□□ -0.23
GYPB-210ENST00000508841 C2orf72A6NCS6 295 aa13.61□□□□□ -0.23
GYPB-210ENST00000508841 RIMBP2O15034 1052 aa13.6□□□□□ -0.23
GYPB-210ENST00000508841 VARS2Q5ST30 1063 aaKnown RBP13.57□□□□□ -0.24
GYPB-210ENST00000508841 PLPP6Q8IY26 295 aa13.57□□□□□ -0.24
GYPB-210ENST00000508841 TPRNQ4KMQ1 711 aa13.53□□□□□ -0.24
GYPB-210ENST00000508841 SMYD5Q6GMV2 418 aa13.53□□□□□ -0.24
GYPB-210ENST00000508841 MYT1LQ9UL68 1186 aa13.53□□□□□ -0.24
GYPB-210ENST00000508841 SPDYE16A6NNV3 312 aaPredicted RBP13.51□□□□□ -0.25
GYPB-210ENST00000508841 TMEM92Q6UXU6 159 aa13.51□□□□□ -0.25
GYPB-210ENST00000508841 TESPA1A2RU30 521 aaPredicted RBP13.5□□□□□ -0.25
GYPB-210ENST00000508841 EMILIN3Q9NT22 766 aa13.48□□□□□ -0.25
GYPB-210ENST00000508841 SEMA3EO15041 775 aa13.47□□□□□ -0.25
GYPB-210ENST00000508841 ZNF687Q8N1G0 1237 aa13.47□□□□□ -0.25
GYPB-210ENST00000508841 ZSWIM6Q9HCJ5 1215 aa13.47□□□□□ -0.25
GYPB-210ENST00000508841 DPYSL4O14531 572 aa13.45□□□□□ -0.26
GYPB-210ENST00000508841 PDIA6Q15084 440 aa13.45□□□□□ -0.26
GYPB-210ENST00000508841 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.45□□□□□ -0.26
GYPB-210ENST00000508841 LMOD2Q6P5Q4 547 aa13.44□□□□□ -0.26
GYPB-210ENST00000508841 MAP3K9P80192 1104 aa13.43□□□□□ -0.26
GYPB-210ENST00000508841 TBC1D12O60347 775 aa13.41□□□□□ -0.26
GYPB-210ENST00000508841 PRKCSHP14314 528 aaPredicted RBP13.41□□□□□ -0.26
GYPB-210ENST00000508841 GPR153Q6NV75 609 aa13.41□□□□□ -0.26
GYPB-210ENST00000508841 SLC34A2O95436 690 aa13.4□□□□□ -0.26
GYPB-210ENST00000508841 OXER1Q8TDS5 423 aa13.4□□□□□ -0.26
GYPB-210ENST00000508841 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
GYPB-210ENST00000508841 PTGER2P43116 358 aa13.39□□□□□ -0.27
GYPB-210ENST00000508841 PTCD2Q8WV60 388 aaKnown RBP13.36□□□□□ -0.27
GYPB-210ENST00000508841 UPF1Q92900 1129 aaKnown RBP eCLIP13.36□□□□□ -0.27
GYPB-210ENST00000508841 ARSIQ5FYB1 569 aa13.33□□□□□ -0.28
GYPB-210ENST00000508841 ANKRD13DQ6ZTN6 518 aa13.33□□□□□ -0.28
GYPB-210ENST00000508841 MLLT3P42568 568 aaPredicted RBP13.29□□□□□ -0.28
GYPB-210ENST00000508841 EVI5O60447 810 aa13.28□□□□□ -0.28
GYPB-210ENST00000508841 LSM11P83369 360 aaKnown RBP eCLIP13.24□□□□□ -0.29
GYPB-210ENST00000508841 KHSRPQ92945 711 aaKnown RBP eCLIP13.24□□□□□ -0.294e-6■■■■□ 21.1
GYPB-210ENST00000508841 ZC3H15Q8WU90 426 aaKnown RBP13.23□□□□□ -0.29
GYPB-210ENST00000508841 PCDHGA4Q9Y5G9 962 aa13.23□□□□□ -0.29
GYPB-210ENST00000508841 GPIHBP1Q8IV16 184 aa13.22□□□□□ -0.29
GYPB-210ENST00000508841 ANO8Q9HCE9 1232 aaPredicted RBP13.22□□□□□ -0.29
GYPB-210ENST00000508841 GRXCR2A6NFK2 248 aa13.21□□□□□ -0.29
GYPB-210ENST00000508841 RBM26Q5T8P6 1007 aaKnown RBP13.19□□□□□ -0.3
GYPB-210ENST00000508841 DDX12PQ92771 950 aa13.16□□□□□ -0.3
GYPB-210ENST00000508841 EPAS1Q99814 870 aa13.16□□□□□ -0.3
GYPB-210ENST00000508841 PHF14O94880 888 aa13.15□□□□□ -0.3
GYPB-210ENST00000508841 ZMYND10O75800 440 aa13.14□□□□□ -0.31
GYPB-210ENST00000508841 OSBPP22059 807 aa13.14□□□□□ -0.31
GYPB-210ENST00000508841 PBX2P40425 430 aa13.13□□□□□ -0.31
GYPB-210ENST00000508841 NUDT7P0C024 238 aa13.11□□□□□ -0.31
GYPB-210ENST00000508841 KDM4FA0A1W2PPD8 638 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms