RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.06■□□□□ 0.48
CHD1-205ENST00000508756 CRISPLD2Q9H0B8 497 aa18.05■□□□□ 0.48
CHD1-205ENST00000508756 KDM2AQ9Y2K7 1162 aa18.05■□□□□ 0.48
CHD1-205ENST00000508756 MAMSTRQ6ZN01 415 aa18.02■□□□□ 0.48
CHD1-205ENST00000508756 VSIG10Q8N0Z9 540 aa18.02■□□□□ 0.48
CHD1-205ENST00000508756 SCUBE2Q9NQ36 999 aa18.02■□□□□ 0.48
CHD1-205ENST00000508756 TMC2Q8TDI7 906 aa18.01■□□□□ 0.47
CHD1-205ENST00000508756 C2orf72A6NCS6 295 aa18■□□□□ 0.47
CHD1-205ENST00000508756 PDE4AP27815 886 aa18■□□□□ 0.47
CHD1-205ENST00000508756 LARP6Q9BRS8 491 aaKnown RBP18■□□□□ 0.47
CHD1-205ENST00000508756 GPHNQ9NQX3 736 aaPredicted RBP17.99■□□□□ 0.47
CHD1-205ENST00000508756 KIF3CO14782 793 aa17.98■□□□□ 0.47
CHD1-205ENST00000508756 OTUD5Q96G74 571 aa17.97■□□□□ 0.47
CHD1-205ENST00000508756 SLAIN1Q8ND83 568 aa17.93■□□□□ 0.46
CHD1-205ENST00000508756 MFSD10Q14728 455 aa17.92■□□□□ 0.46
CHD1-205ENST00000508756 DSG2Q14126 1118 aa17.91■□□□□ 0.46
CHD1-205ENST00000508756 DDX27Q96GQ7 796 aaKnown RBP17.91■□□□□ 0.46
CHD1-205ENST00000508756 PPP1R15BQ5SWA1 713 aa17.88■□□□□ 0.45
CHD1-205ENST00000508756 WDR70Q9NW82 654 aa17.88■□□□□ 0.45
CHD1-205ENST00000508756 FOXK1P85037 733 aa17.87■□□□□ 0.45
CHD1-205ENST00000508756 PLPP6Q8IY26 295 aa17.84■□□□□ 0.45
CHD1-205ENST00000508756 E2F4Q16254 413 aa17.74■□□□□ 0.43
CHD1-205ENST00000508756 CAMK2BQ13554 666 aa17.71■□□□□ 0.43
CHD1-205ENST00000508756 KCNV2Q8TDN2 545 aa17.7■□□□□ 0.42
CHD1-205ENST00000508756 EMILIN3Q9NT22 766 aa17.68■□□□□ 0.42
CHD1-205ENST00000508756 HOXB3P14651 431 aaPredicted RBP17.66■□□□□ 0.42
CHD1-205ENST00000508756 UPF1Q92900 1129 aaKnown RBP eCLIP17.64■□□□□ 0.41
CHD1-205ENST00000508756 P3H3Q8IVL6 736 aa17.63■□□□□ 0.41
CHD1-205ENST00000508756 SLC34A2O95436 690 aa17.6■□□□□ 0.41
CHD1-205ENST00000508756 DOK7Q18PE1 504 aa17.6■□□□□ 0.41
CHD1-205ENST00000508756 OXER1Q8TDS5 423 aa17.59■□□□□ 0.41
CHD1-205ENST00000508756 SNPHO15079 494 aa17.58■□□□□ 0.4
CHD1-205ENST00000508756 DPYSL4O14531 572 aa17.57■□□□□ 0.4
CHD1-205ENST00000508756 PTCD2Q8WV60 388 aaKnown RBP17.56■□□□□ 0.4
CHD1-205ENST00000508756 ZNF710Q8N1W2 664 aa17.53■□□□□ 0.4
CHD1-205ENST00000508756 ARHGEF1Q92888 912 aaKnown RBP17.53■□□□□ 0.4
CHD1-205ENST00000508756 PCDHGA4Q9Y5G9 962 aa17.53■□□□□ 0.4
CHD1-205ENST00000508756 ARIH1Q9Y4X5 557 aaPredicted RBP17.52■□□□□ 0.4
CHD1-205ENST00000508756 RIMBP2O15034 1052 aa17.51■□□□□ 0.39
CHD1-205ENST00000508756 MAP3K9P80192 1104 aa17.51■□□□□ 0.39
CHD1-205ENST00000508756 KHSRPQ92945 711 aaKnown RBP eCLIP17.49■□□□□ 0.39
CHD1-205ENST00000508756 ARSIQ5FYB1 569 aa17.48■□□□□ 0.39
CHD1-205ENST00000508756 TBC1D12O60347 775 aa17.46■□□□□ 0.39
CHD1-205ENST00000508756 GPR153Q6NV75 609 aa17.46■□□□□ 0.39
CHD1-205ENST00000508756 ZSWIM6Q9HCJ5 1215 aa17.46■□□□□ 0.39
CHD1-205ENST00000508756 FAM163AQ96GL9 167 aaPredicted RBP17.42■□□□□ 0.38
CHD1-205ENST00000508756 ST18O60284 1047 aa17.41■□□□□ 0.38
CHD1-205ENST00000508756 EVI5O60447 810 aa17.41■□□□□ 0.38
CHD1-205ENST00000508756 PDIA6Q15084 440 aa17.41■□□□□ 0.38
CHD1-205ENST00000508756 NUDT7P0C024 238 aa17.4■□□□□ 0.38
CHD1-205ENST00000508756 HOXB1P14653 301 aaPredicted RBP17.38■□□□□ 0.37
CHD1-205ENST00000508756 KDM4FA0A1W2PPD8 638 aa17.37■□□□□ 0.37
CHD1-205ENST00000508756 SPDYE16A6NNV3 312 aaPredicted RBP17.37■□□□□ 0.37
CHD1-205ENST00000508756 NBR1Q14596 966 aa17.36■□□□□ 0.37
CHD1-205ENST00000508756 SEMA3EO15041 775 aa17.34■□□□□ 0.37
CHD1-205ENST00000508756 LCE2DQ5TA82 110 aaPredicted RBP17.34■□□□□ 0.37
CHD1-205ENST00000508756 ZNF316A6NFI3 1004 aaPredicted RBP17.33■□□□□ 0.36
CHD1-205ENST00000508756 ANO8Q9HCE9 1232 aaPredicted RBP17.31■□□□□ 0.36
CHD1-205ENST00000508756 MARVELD3Q96A59 401 aa17.29■□□□□ 0.36
CHD1-205ENST00000508756 BCANQ96GW7 911 aa17.28■□□□□ 0.36
CHD1-205ENST00000508756 LHX6Q9UPM6 363 aa17.27■□□□□ 0.36
CHD1-205ENST00000508756 MLLT3P42568 568 aaPredicted RBP17.26■□□□□ 0.35
CHD1-205ENST00000508756 DDX12PQ92771 950 aa17.26■□□□□ 0.35
CHD1-205ENST00000508756 TESPA1A2RU30 521 aaPredicted RBP17.24■□□□□ 0.35
CHD1-205ENST00000508756 EMP3P54852 163 aa17.23■□□□□ 0.35
CHD1-205ENST00000508756 PTGER2P43116 358 aa17.22■□□□□ 0.35
CHD1-205ENST00000508756 GRXCR2A6NFK2 248 aa17.21■□□□□ 0.35
CHD1-205ENST00000508756 ZNF454Q8N9F8 522 aa17.16■□□□□ 0.34
CHD1-205ENST00000508756 JPH4Q96JJ6 628 aa17.16■□□□□ 0.34
CHD1-205ENST00000508756 ERBB3P21860 1342 aa17.16■□□□□ 0.34
CHD1-205ENST00000508756 FOSBP53539 338 aa17.15■□□□□ 0.34
CHD1-205ENST00000508756 PCDHGA10Q9Y5H3 936 aa17.15■□□□□ 0.34
CHD1-205ENST00000508756 FAM205CA6NFA0 338 aa17.13■□□□□ 0.33
CHD1-205ENST00000508756 PHF14O94880 888 aa17.13■□□□□ 0.33
CHD1-205ENST00000508756 VARS2Q5ST30 1063 aaKnown RBP17.13■□□□□ 0.33
CHD1-205ENST00000508756 OSBPP22059 807 aa17.1■□□□□ 0.33
CHD1-205ENST00000508756 PRIM1P49642 420 aaKnown RBP17.1■□□□□ 0.33
CHD1-205ENST00000508756 POTEB3A0JP26 581 aa17.08■□□□□ 0.32
CHD1-205ENST00000508756 PSDA5PKW4 1024 aaPredicted RBP17.08■□□□□ 0.32
CHD1-205ENST00000508756 PPP4R3BQ5MIZ7 849 aa17.08■□□□□ 0.32
CHD1-205ENST00000508756 SMYD5Q6GMV2 418 aa17.08■□□□□ 0.32
CHD1-205ENST00000508756 TYW1BQ6NUM6 668 aa17.08■□□□□ 0.32
CHD1-205ENST00000508756 POTEBQ6S5H4 581 aa17.08■□□□□ 0.32
CHD1-205ENST00000508756 EPAS1Q99814 870 aa17.08■□□□□ 0.32
CHD1-205ENST00000508756 HS3ST6Q96QI5 342 aa17.07■□□□□ 0.32
CHD1-205ENST00000508756 ZDHHC16Q969W1 377 aa17.06■□□□□ 0.32
CHD1-205ENST00000508756 RBM33Q96EV2 1170 aaKnown RBP17.06■□□□□ 0.32
CHD1-205ENST00000508756 RBM26Q5T8P6 1007 aaKnown RBP17.04■□□□□ 0.32
CHD1-205ENST00000508756 ADAM33Q9BZ11 813 aa17.04■□□□□ 0.32
CHD1-205ENST00000508756 TULP1O00294 542 aaPredicted RBP17.03■□□□□ 0.32
CHD1-205ENST00000508756 FBXW7Q969H0 707 aa17.03■□□□□ 0.32
CHD1-205ENST00000508756 EN1Q05925 392 aaPredicted RBP17.02■□□□□ 0.32
CHD1-205ENST00000508756 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.02■□□□□ 0.32
CHD1-205ENST00000508756 MAP3K7O43318 606 aa16.99■□□□□ 0.31
CHD1-205ENST00000508756 LMOD2Q6P5Q4 547 aa16.99■□□□□ 0.31
CHD1-205ENST00000508756 TSR1Q2NL82 804 aaKnown RBP16.97■□□□□ 0.31
CHD1-205ENST00000508756 POTEGQ6S5H5 508 aa16.97■□□□□ 0.31
CHD1-205ENST00000508756 BCL2L12Q9HB09 334 aa16.96■□□□□ 0.31
CHD1-205ENST00000508756 POTEMA6NI47 508 aa16.95■□□□□ 0.3
CHD1-205ENST00000508756 ZNF687Q8N1G0 1237 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms