RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 KDM4FA0A1W2PPD8 638 aa11.88□□□□□ -0.51
NR1I3-226ENST00000508740 ARID3CA6NKF2 412 aa11.88□□□□□ -0.51
NR1I3-226ENST00000508740 ITGAEP38570 1179 aa11.88□□□□□ -0.51
NR1I3-226ENST00000508740 NUP153P49790 1475 aaKnown RBP11.88□□□□□ -0.51
NR1I3-226ENST00000508740 NCOA2Q15596 1464 aa11.88□□□□□ -0.51
NR1I3-226ENST00000508740 LRRIQ1Q96JM4 1722 aa11.87□□□□□ -0.51
NR1I3-226ENST00000508740 CDK11AQ9UQ88 783 aaPredicted RBP11.87□□□□□ -0.51
NR1I3-226ENST00000508740 CDK13Q14004 1512 aaKnown RBP11.86□□□□□ -0.51
NR1I3-226ENST00000508740 MAGI3Q5TCQ9 1506 aa11.86□□□□□ -0.51
NR1I3-226ENST00000508740 FGD6Q6ZV73 1430 aa11.86□□□□□ -0.51
NR1I3-226ENST00000508740 PLB1Q6P1J6 1458 aa11.85□□□□□ -0.51
NR1I3-226ENST00000508740 RAPGEF6Q8TEU7 1601 aa11.85□□□□□ -0.51
NR1I3-226ENST00000508740 PTPRGP23470 1445 aa11.85□□□□□ -0.51
NR1I3-226ENST00000508740 MYOM3Q5VTT5 1437 aa11.85□□□□□ -0.51
NR1I3-226ENST00000508740 GLI2P10070 1586 aa11.84□□□□□ -0.51
NR1I3-226ENST00000508740 ABCC2Q92887 1545 aa11.84□□□□□ -0.51
NR1I3-226ENST00000508740 TSPOAP1O95153 1857 aa11.83□□□□□ -0.52
NR1I3-226ENST00000508740 RNF39Q9H2S5 420 aa11.83□□□□□ -0.52
NR1I3-226ENST00000508740 SUPT6HQ7KZ85 1726 aaKnown RBP11.82□□□□□ -0.52
NR1I3-226ENST00000508740 ILDR1Q86SU0 546 aaPredicted RBP11.81□□□□□ -0.52
NR1I3-226ENST00000508740 UHRF1BP1LA0JNW5 1464 aa11.81□□□□□ -0.52
NR1I3-226ENST00000508740 ABCA8O94911 1581 aa11.8□□□□□ -0.52
NR1I3-226ENST00000508740 SETD5Q9C0A6 1442 aa11.8□□□□□ -0.52
NR1I3-226ENST00000508740 TEX14Q8IWB6 1497 aa11.8□□□□□ -0.52
NR1I3-226ENST00000508740 TROQ12816 1431 aaPredicted RBP11.79□□□□□ -0.52
NR1I3-226ENST00000508740 ASXL2Q76L83 1435 aa11.78□□□□□ -0.52
NR1I3-226ENST00000508740 MIA2Q96PC5 1412 aa11.78□□□□□ -0.52
NR1I3-226ENST00000508740 ATP10BO94823 1461 aa11.78□□□□□ -0.52
NR1I3-226ENST00000508740 ADGRL1O94910 1474 aa11.78□□□□□ -0.52
NR1I3-226ENST00000508740 PLEKHD1A6NEE1 506 aa11.78□□□□□ -0.52
NR1I3-226ENST00000508740 CLSPNQ9HAW4 1339 aa11.78□□□□□ -0.52
NR1I3-226ENST00000508740 DHX57Q6P158 1386 aaKnown RBP11.78□□□□□ -0.52
NR1I3-226ENST00000508740 RAB3GAP2Q9H2M9 1393 aa11.78□□□□□ -0.52
NR1I3-226ENST00000508740 UACAQ9BZF9 1416 aa11.77□□□□□ -0.53
NR1I3-226ENST00000508740 TCOF1Q13428 1488 aaKnown RBP11.76□□□□□ -0.53
NR1I3-226ENST00000508740 SPINK5Q9NQ38 1064 aaPredicted RBP11.75□□□□□ -0.53
NR1I3-226ENST00000508740 PTPRKQ15262 1439 aa11.75□□□□□ -0.53
NR1I3-226ENST00000508740 PPRC1Q5VV67 1664 aaKnown RBP11.75□□□□□ -0.53
NR1I3-226ENST00000508740 PTPN23Q9H3S7 1636 aa11.74□□□□□ -0.53
NR1I3-226ENST00000508740 KDM5BQ9UGL1 1544 aa11.73□□□□□ -0.53
NR1I3-226ENST00000508740 MAP3K4Q9Y6R4 1608 aa11.72□□□□□ -0.53
NR1I3-226ENST00000508740 ZNF219Q9P2Y4 722 aaPredicted RBP11.71□□□□□ -0.53
NR1I3-226ENST00000508740 GPATCH8Q9UKJ3 1502 aaKnown RBP11.7□□□□□ -0.54
NR1I3-226ENST00000508740 CFDP1Q9UEE9 299 aaPredicted RBP11.7□□□□□ -0.54
NR1I3-226ENST00000508740 HECW2Q9P2P5 1572 aa11.7□□□□□ -0.54
NR1I3-226ENST00000508740 HFM1A2PYH4 1435 aa11.69□□□□□ -0.54
NR1I3-226ENST00000508740 ZNF644Q9H582 1327 aaPredicted RBP11.69□□□□□ -0.54
NR1I3-226ENST00000508740 CHIC2Q9UKJ5 165 aa11.68□□□□□ -0.54
NR1I3-226ENST00000508740 NAIPQ13075 1403 aa11.68□□□□□ -0.54
NR1I3-226ENST00000508740 RRP7BPQ9NSQ0 103 aa11.66□□□□□ -0.54
NR1I3-226ENST00000508740 KIF14Q15058 1648 aa11.66□□□□□ -0.54
NR1I3-226ENST00000508740 ABCC5O15440 1437 aa11.66□□□□□ -0.54
NR1I3-226ENST00000508740 COL17A1Q9UMD9 1497 aaPredicted RBP11.65□□□□□ -0.54
NR1I3-226ENST00000508740 WDR7Q9Y4E6 1490 aa11.65□□□□□ -0.54
NR1I3-226ENST00000508740 ZCCHC11Q5TAX3 1644 aaKnown RBP11.65□□□□□ -0.54
NR1I3-226ENST00000508740 C1QBPQ07021 282 aaKnown RBP11.65□□□□□ -0.54
NR1I3-226ENST00000508740 DAPK1P53355 1430 aa11.64□□□□□ -0.55
NR1I3-226ENST00000508740 AKNAQ7Z591 1439 aa11.64□□□□□ -0.55
NR1I3-226ENST00000508740 ZNF777Q9ULD5 760 aaPredicted RBP11.64□□□□□ -0.55
NR1I3-226ENST00000508740 ROCK1Q13464 1354 aa11.64□□□□□ -0.55
NR1I3-226ENST00000508740 CAPN15O75808 1086 aa11.63□□□□□ -0.55
NR1I3-226ENST00000508740 CAMSAP2Q08AD1 1489 aa11.62□□□□□ -0.55
NR1I3-226ENST00000508740 ACIN1Q9UKV3 1341 aaKnown RBP11.6□□□□□ -0.55
NR1I3-226ENST00000508740 CD109Q6YHK3 1445 aa11.6□□□□□ -0.55
NR1I3-226ENST00000508740 ITSN2Q9NZM3 1697 aa11.6□□□□□ -0.55
NR1I3-226ENST00000508740 FKBP8Q14318 412 aa11.6□□□□□ -0.55
NR1I3-226ENST00000508740 FBXO41Q8TF61 875 aa11.6□□□□□ -0.55
NR1I3-226ENST00000508740 KCNH8Q96L42 1107 aa11.6□□□□□ -0.55
NR1I3-226ENST00000508740 DNMT1P26358 1616 aaKnown RBP11.6□□□□□ -0.55
NR1I3-226ENST00000508740 RSPH4AQ5TD94 716 aa11.57□□□□□ -0.56
NR1I3-226ENST00000508740 SIN3AQ96ST3 1273 aa11.57□□□□□ -0.56
NR1I3-226ENST00000508740 ARAP3Q8WWN8 1544 aa11.56□□□□□ -0.56
NR1I3-226ENST00000508740 ZNF316A6NFI3 1004 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-226ENST00000508740 TSPY4P0CV99 314 aa11.56□□□□□ -0.56
NR1I3-226ENST00000508740 TSPY10P0CW01 314 aa11.56□□□□□ -0.56
NR1I3-226ENST00000508740 HNRNPMP52272 730 aaKnown RBP eCLIP11.56□□□□□ -0.56
NR1I3-226ENST00000508740 NCOA1Q15788 1441 aa11.56□□□□□ -0.56
NR1I3-226ENST00000508740 TRIM52Q96A61 297 aa11.56□□□□□ -0.56
NR1I3-226ENST00000508740 TIMELESSQ9UNS1 1208 aa11.56□□□□□ -0.56
NR1I3-226ENST00000508740 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.55□□□□□ -0.56
NR1I3-226ENST00000508740 CDC42BPAQ5VT25 1732 aa11.55□□□□□ -0.56
NR1I3-226ENST00000508740 NEUROD1Q13562 356 aa11.55□□□□□ -0.56
NR1I3-226ENST00000508740 ADGRL2O95490 1459 aa11.55□□□□□ -0.56
NR1I3-226ENST00000508740 ANKRD30AQ9BXX3 1397 aa11.54□□□□□ -0.56
NR1I3-226ENST00000508740 MBD5Q9P267 1494 aa11.54□□□□□ -0.56
NR1I3-226ENST00000508740 GCC2Q8IWJ2 1684 aa11.54□□□□□ -0.56
NR1I3-226ENST00000508740 PLCH2O75038 1416 aa11.53□□□□□ -0.56
NR1I3-226ENST00000508740 MPHOSPH9Q99550 1183 aa11.53□□□□□ -0.56
NR1I3-226ENST00000508740 SHANK2Q9UPX8 1470 aa11.52□□□□□ -0.56
NR1I3-226ENST00000508740 EFCAB2Q5VUJ9 269 aa11.52□□□□□ -0.57
NR1I3-226ENST00000508740 C9orf84Q5VXU9 1444 aa11.52□□□□□ -0.57
NR1I3-226ENST00000508740 KIAA1107Q9UPP5 1409 aa11.52□□□□□ -0.57
NR1I3-226ENST00000508740 ARHGEF5Q12774 1597 aa11.51□□□□□ -0.57
NR1I3-226ENST00000508740 TTC37Q6PGP7 1564 aa11.51□□□□□ -0.57
NR1I3-226ENST00000508740 PREX2Q70Z35 1606 aa11.51□□□□□ -0.57
NR1I3-226ENST00000508740 POLA2Q14181 598 aa11.51□□□□□ -0.57
NR1I3-226ENST00000508740 PLEKHH2Q8IVE3 1493 aa11.51□□□□□ -0.57
NR1I3-226ENST00000508740 ARHGAP5Q13017 1502 aa11.5□□□□□ -0.57
NR1I3-226ENST00000508740 SAMD9LQ8IVG5 1584 aa11.5□□□□□ -0.57
NR1I3-226ENST00000508740 CDC42BPBQ9Y5S2 1711 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms