RNA–Protein interactions for RNA: ENST00000507488.6

ATP2C1-212, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-212ENST00000507488 ABCC5O15440 1437 aa6.63□□□□□ -1.35
ATP2C1-212ENST00000507488 NBPF8Q3BBV2 869 aa6.63□□□□□ -1.35
ATP2C1-212ENST00000507488 CFDP1Q9UEE9 299 aaPredicted RBP6.63□□□□□ -1.35
ATP2C1-212ENST00000507488 ATP10BO94823 1461 aa6.63□□□□□ -1.35
ATP2C1-212ENST00000507488 NUP160Q12769 1436 aa6.62□□□□□ -1.35
ATP2C1-212ENST00000507488 PPP1R15AO75807 674 aaPredicted RBP6.62□□□□□ -1.35
ATP2C1-212ENST00000507488 ZNF326Q5BKZ1 582 aaKnown RBP6.62□□□□□ -1.35
ATP2C1-212ENST00000507488 MPHOSPH9Q99550 1183 aa6.62□□□□□ -1.35
ATP2C1-212ENST00000507488 HFM1A2PYH4 1435 aa6.62□□□□□ -1.35
ATP2C1-212ENST00000507488 RAPGEF6Q8TEU7 1601 aa6.62□□□□□ -1.35
ATP2C1-212ENST00000507488 KDM5BQ9UGL1 1544 aa6.62□□□□□ -1.35
ATP2C1-212ENST00000507488 CHD1O14646 1710 aa6.61□□□□□ -1.35
ATP2C1-212ENST00000507488 EHBP1L1Q8N3D4 1523 aa6.61□□□□□ -1.35
ATP2C1-212ENST00000507488 HECW1Q76N89 1606 aa6.61□□□□□ -1.35
ATP2C1-212ENST00000507488 MAGI1Q96QZ7 1491 aaPredicted RBP6.61□□□□□ -1.35
ATP2C1-212ENST00000507488 CCDC184Q52MB2 194 aa6.61□□□□□ -1.35
ATP2C1-212ENST00000507488 L3MBTL2Q969R5 705 aa6.61□□□□□ -1.35
ATP2C1-212ENST00000507488 GPATCH8Q9UKJ3 1502 aaKnown RBP6.6□□□□□ -1.35
ATP2C1-212ENST00000507488 DAPK1P53355 1430 aa6.6□□□□□ -1.35
ATP2C1-212ENST00000507488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.58□□□□□ -1.36
ATP2C1-212ENST00000507488 SLC4A1APQ9BWU0 796 aaKnown RBP6.58□□□□□ -1.36
ATP2C1-212ENST00000507488 PTPRGP23470 1445 aa6.58□□□□□ -1.36
ATP2C1-212ENST00000507488 CAMSAP2Q08AD1 1489 aa6.58□□□□□ -1.36
ATP2C1-212ENST00000507488 UACAQ9BZF9 1416 aa6.57□□□□□ -1.36
ATP2C1-212ENST00000507488 PLEKHD1A6NEE1 506 aa6.57□□□□□ -1.36
ATP2C1-212ENST00000507488 KDM2AQ9Y2K7 1162 aa6.57□□□□□ -1.36
ATP2C1-212ENST00000507488 TONSLQ96HA7 1378 aa6.57□□□□□ -1.36
ATP2C1-212ENST00000507488 TROQ12816 1431 aaPredicted RBP6.57□□□□□ -1.36
ATP2C1-212ENST00000507488 POLR3GLQ9BT43 218 aa6.57□□□□□ -1.36
ATP2C1-212ENST00000507488 TCOF1Q13428 1488 aaKnown RBP6.56□□□□□ -1.36
ATP2C1-212ENST00000507488 HSPA5P11021 654 aaKnown RBP6.56□□□□□ -1.36
ATP2C1-212ENST00000507488 PKD2Q13563 968 aa6.56□□□□□ -1.36
ATP2C1-212ENST00000507488 AFAP1Q8N556 730 aa6.56□□□□□ -1.36
ATP2C1-212ENST00000507488 WASHC2AQ641Q2 1341 aa6.55□□□□□ -1.36
ATP2C1-212ENST00000507488 ABCA8O94911 1581 aa6.55□□□□□ -1.36
ATP2C1-212ENST00000507488 NCOA1Q15788 1441 aa6.55□□□□□ -1.36
ATP2C1-212ENST00000507488 RGL3Q3MIN7 710 aa6.55□□□□□ -1.36
ATP2C1-212ENST00000507488 ARHGEF12Q9NZN5 1544 aa6.54□□□□□ -1.36
ATP2C1-212ENST00000507488 ABCC10Q5T3U5 1492 aa6.54□□□□□ -1.36
ATP2C1-212ENST00000507488 TTC37Q6PGP7 1564 aa6.54□□□□□ -1.36
ATP2C1-212ENST00000507488 PZPP20742 1482 aa6.54□□□□□ -1.36
ATP2C1-212ENST00000507488 CARMIL2Q6F5E8 1435 aa6.54□□□□□ -1.36
ATP2C1-212ENST00000507488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.54□□□□□ -1.36
ATP2C1-212ENST00000507488 CDC42BPAQ5VT25 1732 aa6.53□□□□□ -1.36
ATP2C1-212ENST00000507488 ANKRD30BQ9BXX2 1392 aa6.53□□□□□ -1.36
ATP2C1-212ENST00000507488 SLC24A1O60721 1099 aa6.53□□□□□ -1.36
ATP2C1-212ENST00000507488 BCANQ96GW7 911 aa6.53□□□□□ -1.36
ATP2C1-212ENST00000507488 AKNAQ7Z591 1439 aa6.52□□□□□ -1.37
ATP2C1-212ENST00000507488 CDK11AQ9UQ88 783 aaPredicted RBP6.52□□□□□ -1.37
ATP2C1-212ENST00000507488 NUP155O75694 1391 aa6.51□□□□□ -1.37
ATP2C1-212ENST00000507488 DNMT1P26358 1616 aaKnown RBP6.51□□□□□ -1.37
ATP2C1-212ENST00000507488 MIA2Q96PC5 1412 aa6.51□□□□□ -1.37
ATP2C1-212ENST00000507488 MBD5Q9P267 1494 aa6.51□□□□□ -1.37
ATP2C1-212ENST00000507488 SAMD9LQ8IVG5 1584 aa6.51□□□□□ -1.37
ATP2C1-212ENST00000507488 SYCP2Q9BX26 1530 aa6.51□□□□□ -1.37
ATP2C1-212ENST00000507488 NBPF1Q3BBV0 1214 aa6.51□□□□□ -1.37
ATP2C1-212ENST00000507488 POTEDQ86YR6 584 aa6.51□□□□□ -1.37
ATP2C1-212ENST00000507488 TIMELESSQ9UNS1 1208 aa6.51□□□□□ -1.37
ATP2C1-212ENST00000507488 C9orf84Q5VXU9 1444 aa6.5□□□□□ -1.37
ATP2C1-212ENST00000507488 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.5□□□□□ -1.374e-8■□□□□ 8.6
ATP2C1-212ENST00000507488 ABCC2Q92887 1545 aa6.5□□□□□ -1.37
ATP2C1-212ENST00000507488 CDC42BPBQ9Y5S2 1711 aa6.5□□□□□ -1.37
ATP2C1-212ENST00000507488 IRX6P78412 446 aaPredicted RBP6.5□□□□□ -1.37
ATP2C1-212ENST00000507488 TRAPPC8Q9Y2L5 1435 aa6.5□□□□□ -1.37
ATP2C1-212ENST00000507488 GCC2Q8IWJ2 1684 aa6.5□□□□□ -1.37
ATP2C1-212ENST00000507488 ANKRD50Q9ULJ7 1429 aa6.49□□□□□ -1.37
ATP2C1-212ENST00000507488 KIF15Q9NS87 1388 aa6.49□□□□□ -1.37
ATP2C1-212ENST00000507488 DCAF11Q8TEB1 546 aa6.48□□□□□ -1.37
ATP2C1-212ENST00000507488 PLEKHH2Q8IVE3 1493 aa6.48□□□□□ -1.37
ATP2C1-212ENST00000507488 TEX14Q8IWB6 1497 aa6.48□□□□□ -1.37
ATP2C1-212ENST00000507488 ARHGAP5Q13017 1502 aa6.47□□□□□ -1.37
ATP2C1-212ENST00000507488 TSPY4P0CV99 314 aa6.47□□□□□ -1.37
ATP2C1-212ENST00000507488 TSPY10P0CW01 314 aa6.47□□□□□ -1.37
ATP2C1-212ENST00000507488 NUTM2DQ5VT03 806 aaPredicted RBP6.47□□□□□ -1.37
ATP2C1-212ENST00000507488 MYT1LQ9UL68 1186 aa6.46□□□□□ -1.37
ATP2C1-212ENST00000507488 KIF7Q2M1P5 1343 aa6.46□□□□□ -1.37
ATP2C1-212ENST00000507488 PLA2R1Q13018 1463 aa6.46□□□□□ -1.38
ATP2C1-212ENST00000507488 SHROOM2Q13796 1616 aa6.46□□□□□ -1.38
ATP2C1-212ENST00000507488 CLASP1Q7Z460 1538 aa6.46□□□□□ -1.38
ATP2C1-212ENST00000507488 RPRD2Q5VT52 1461 aaKnown RBP6.46□□□□□ -1.38
ATP2C1-212ENST00000507488 CYB5RLQ6IPT4 315 aa6.46□□□□□ -1.38
ATP2C1-212ENST00000507488 ZCCHC11Q5TAX3 1644 aaKnown RBP6.45□□□□□ -1.38
ATP2C1-212ENST00000507488 ADCY10Q96PN6 1610 aa6.45□□□□□ -1.38
ATP2C1-212ENST00000507488 ROCK1Q13464 1354 aa6.45□□□□□ -1.38
ATP2C1-212ENST00000507488 RAPGEF3O95398 923 aa6.45□□□□□ -1.38
ATP2C1-212ENST00000507488 ANKRD30AQ9BXX3 1397 aa6.45□□□□□ -1.38
ATP2C1-212ENST00000507488 ST20-MTHFSA0A0A6YYL1 179 aa6.44□□□□□ -1.38
ATP2C1-212ENST00000507488 FAM9BQ8IZU0 186 aa6.44□□□□□ -1.38
ATP2C1-212ENST00000507488 BCORL1Q5H9F3 1711 aa6.44□□□□□ -1.38
ATP2C1-212ENST00000507488 CROCC2H7BZ55 1655 aa6.44□□□□□ -1.38
ATP2C1-212ENST00000507488 SUPT16HQ9Y5B9 1047 aaKnown RBP6.44□□□□□ -1.38
ATP2C1-212ENST00000507488 EIF4G2P78344 907 aaKnown RBP eCLIP6.43□□□□□ -1.38
ATP2C1-212ENST00000507488 RTN4Q9NQC3 1192 aaKnown RBP6.43□□□□□ -1.38
ATP2C1-212ENST00000507488 KIAA1107Q9UPP5 1409 aa6.43□□□□□ -1.38
ATP2C1-212ENST00000507488 UGGT1Q9NYU2 1555 aa6.43□□□□□ -1.38
ATP2C1-212ENST00000507488 SALL2Q9Y467 1007 aaPredicted RBP6.42□□□□□ -1.38
ATP2C1-212ENST00000507488 SPATA31E1Q6ZUB1 1445 aa6.42□□□□□ -1.38
ATP2C1-212ENST00000507488 SCAPERQ9BY12 1400 aa6.42□□□□□ -1.38
ATP2C1-212ENST00000507488 PREX2Q70Z35 1606 aa6.41□□□□□ -1.38
ATP2C1-212ENST00000507488 ANP32CO43423 234 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms