RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 CANXP27824 592 aaKnown RBP12.84□□□□□ -0.35
NEK1-203ENST00000507142 BCL11AQ9H165 835 aa12.84□□□□□ -0.35
NEK1-203ENST00000507142 HIRIP3Q9BW71 556 aaPredicted RBP12.83□□□□□ -0.36
NEK1-203ENST00000507142 CCDC9Q9Y3X0 531 aaKnown RBP12.83□□□□□ -0.36
NEK1-203ENST00000507142 SIN3AQ96ST3 1273 aa12.81□□□□□ -0.36
NEK1-203ENST00000507142 ZNF644Q9H582 1327 aaPredicted RBP12.81□□□□□ -0.36
NEK1-203ENST00000507142 ZBTB47Q9UFB7 747 aaPredicted RBP12.81□□□□□ -0.36
NEK1-203ENST00000507142 ZNF316A6NFI3 1004 aaPredicted RBP12.8□□□□□ -0.36
NEK1-203ENST00000507142 CD109Q6YHK3 1445 aa12.79□□□□□ -0.36
NEK1-203ENST00000507142 POGZQ7Z3K3 1410 aa12.79□□□□□ -0.36
NEK1-203ENST00000507142 MPHOSPH9Q99550 1183 aa12.79□□□□□ -0.36
NEK1-203ENST00000507142 ERICH3Q5RHP9 1530 aa12.79□□□□□ -0.36
NEK1-203ENST00000507142 NUTM2FA1L443 756 aa12.78□□□□□ -0.36
NEK1-203ENST00000507142 KIF21AQ7Z4S6 1674 aa12.77□□□□□ -0.36
NEK1-203ENST00000507142 SETD5Q9C0A6 1442 aa12.77□□□□□ -0.36
NEK1-203ENST00000507142 DDX10Q13206 875 aaKnown RBP12.77□□□□□ -0.37
NEK1-203ENST00000507142 WDR43Q15061 677 aaKnown RBP eCLIP12.77□□□□□ -0.37
NEK1-203ENST00000507142 IQGAP2Q13576 1575 aa12.77□□□□□ -0.37
NEK1-203ENST00000507142 ARXQ96QS3 562 aa12.76□□□□□ -0.37
NEK1-203ENST00000507142 KNSTRNQ9Y448 316 aa12.76□□□□□ -0.37
NEK1-203ENST00000507142 SCAPERQ9BY12 1400 aa12.75□□□□□ -0.37
NEK1-203ENST00000507142 MEX3CQ5U5Q3 659 aaKnown RBP12.75□□□□□ -0.37
NEK1-203ENST00000507142 CLSPNQ9HAW4 1339 aa12.74□□□□□ -0.37
NEK1-203ENST00000507142 CSB-PGBD3P0DP91 1061 aa12.74□□□□□ -0.37
NEK1-203ENST00000507142 CASKIN1Q8WXD9 1431 aa12.74□□□□□ -0.37
NEK1-203ENST00000507142 NGDNQ8NEJ9 315 aaKnown RBP12.73□□□□□ -0.37
NEK1-203ENST00000507142 SALL2Q9Y467 1007 aaPredicted RBP12.73□□□□□ -0.37
NEK1-203ENST00000507142 TNNT2P45379 298 aaPredicted RBP12.73□□□□□ -0.37
NEK1-203ENST00000507142 MYOM3Q5VTT5 1437 aa12.73□□□□□ -0.37
NEK1-203ENST00000507142 CFAP53Q96M91 514 aa12.72□□□□□ -0.37
NEK1-203ENST00000507142 WDR62O43379 1518 aa12.72□□□□□ -0.37
NEK1-203ENST00000507142 PRXQ9BXM0 1461 aa12.72□□□□□ -0.37
NEK1-203ENST00000507142 VGFO15240 615 aaPredicted RBP12.72□□□□□ -0.37
NEK1-203ENST00000507142 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.71□□□□□ -0.37
NEK1-203ENST00000507142 KIF15Q9NS87 1388 aa12.71□□□□□ -0.38
NEK1-203ENST00000507142 TMF1P82094 1093 aa12.71□□□□□ -0.38
NEK1-203ENST00000507142 CUL7Q14999 1698 aa12.71□□□□□ -0.38
NEK1-203ENST00000507142 PLB1Q6P1J6 1458 aa12.71□□□□□ -0.38
NEK1-203ENST00000507142 HDGFL2Q7Z4V5 671 aaPredicted RBP12.7□□□□□ -0.38
NEK1-203ENST00000507142 EFCAB5A4FU69 1503 aa12.69□□□□□ -0.38
NEK1-203ENST00000507142 ATF3P18847 181 aa12.69□□□□□ -0.38
NEK1-203ENST00000507142 TROQ12816 1431 aaPredicted RBP12.68□□□□□ -0.38
NEK1-203ENST00000507142 TXNDC2Q86VQ3 553 aa12.68□□□□□ -0.38
NEK1-203ENST00000507142 THEMISQ8N1K5 641 aaPredicted RBP12.68□□□□□ -0.38
NEK1-203ENST00000507142 FAM9BQ8IZU0 186 aa12.68□□□□□ -0.38
NEK1-203ENST00000507142 TRAK1Q9UPV9 953 aa12.67□□□□□ -0.38
NEK1-203ENST00000507142 NPHP1O15259 732 aa12.66□□□□□ -0.38
NEK1-203ENST00000507142 RAB3GAP2Q9H2M9 1393 aa12.65□□□□□ -0.38
NEK1-203ENST00000507142 CCDC144AA2RUR9 1427 aa12.65□□□□□ -0.38
NEK1-203ENST00000507142 DNAJC5Q9H3Z4 198 aa12.65□□□□□ -0.38
NEK1-203ENST00000507142 KIF21BO75037 1637 aa12.65□□□□□ -0.38
NEK1-203ENST00000507142 PLEKHH2Q8IVE3 1493 aa12.65□□□□□ -0.38
NEK1-203ENST00000507142 PROSER2Q86WR7 435 aaPredicted RBP12.65□□□□□ -0.38
NEK1-203ENST00000507142 PHF23Q9BUL5 403 aaPredicted RBP12.65□□□□□ -0.38
NEK1-203ENST00000507142 NCOA2Q15596 1464 aa12.65□□□□□ -0.38
NEK1-203ENST00000507142 FYCO1Q9BQS8 1478 aa12.64□□□□□ -0.39
NEK1-203ENST00000507142 EIF4G3O43432 1585 aaKnown RBP12.64□□□□□ -0.39
NEK1-203ENST00000507142 ANKLE2Q86XL3 938 aa12.64□□□□□ -0.39
NEK1-203ENST00000507142 HECW1Q76N89 1606 aa12.64□□□□□ -0.39
NEK1-203ENST00000507142 ROCK2O75116 1388 aaKnown RBP12.64□□□□□ -0.39
NEK1-203ENST00000507142 PIP4K2BP78356 416 aa12.63□□□□□ -0.39
NEK1-203ENST00000507142 NUDCQ9Y266 331 aa12.63□□□□□ -0.39
NEK1-203ENST00000507142 CDK13Q14004 1512 aaKnown RBP12.62□□□□□ -0.39
NEK1-203ENST00000507142 ASXL2Q76L83 1435 aa12.62□□□□□ -0.39
NEK1-203ENST00000507142 ARAP1Q96P48 1450 aa12.61□□□□□ -0.39
NEK1-203ENST00000507142 U2SURPO15042 1029 aaKnown RBP12.61□□□□□ -0.39
NEK1-203ENST00000507142 FGD6Q6ZV73 1430 aa12.61□□□□□ -0.39
NEK1-203ENST00000507142 CEBPAP49715 358 aaPredicted RBP12.6□□□□□ -0.39
NEK1-203ENST00000507142 CC2D1BQ5T0F9 858 aaKnown RBP12.6□□□□□ -0.39
NEK1-203ENST00000507142 MRS2Q9HD23 443 aa12.6□□□□□ -0.39
NEK1-203ENST00000507142 ADGRL1O94910 1474 aa12.6□□□□□ -0.39
NEK1-203ENST00000507142 EIF3AQ14152 1382 aaKnown RBP12.6□□□□□ -0.39
NEK1-203ENST00000507142 LRRC9Q6ZRR7 1453 aa12.59□□□□□ -0.39
NEK1-203ENST00000507142 TEX14Q8IWB6 1497 aa12.59□□□□□ -0.39
NEK1-203ENST00000507142 ARHGEF11O15085 1522 aa12.59□□□□□ -0.39
NEK1-203ENST00000507142 EVA1CP58658 441 aa12.59□□□□□ -0.39
NEK1-203ENST00000507142 DENND4BO75064 1496 aaPredicted RBP12.58□□□□□ -0.39
NEK1-203ENST00000507142 MAPK8IP3Q9UPT6 1336 aa12.58□□□□□ -0.4
NEK1-203ENST00000507142 MORC1Q86VD1 984 aa12.58□□□□□ -0.4
NEK1-203ENST00000507142 ANKRD50Q9ULJ7 1429 aa12.58□□□□□ -0.4
NEK1-203ENST00000507142 EPRSP07814 1512 aaKnown RBP12.58□□□□□ -0.4
NEK1-203ENST00000507142 PSME1Q06323 249 aa12.58□□□□□ -0.4
NEK1-203ENST00000507142 DAXXQ9UER7 740 aaPredicted RBP12.58□□□□□ -0.4
NEK1-203ENST00000507142 AKNAQ7Z591 1439 aa12.58□□□□□ -0.4
NEK1-203ENST00000507142 MINK1Q8N4C8 1332 aaPredicted RBP12.58□□□□□ -0.4
NEK1-203ENST00000507142 BIVM-ERCC5R4GMW8 1640 aa12.58□□□□□ -0.4
NEK1-203ENST00000507142 TERF2IPQ9NYB0 399 aa12.57□□□□□ -0.4
NEK1-203ENST00000507142 PHLDB1Q86UU1 1377 aa12.57□□□□□ -0.4
NEK1-203ENST00000507142 LAS1LQ9Y4W2 734 aaKnown RBP12.56□□□□□ -0.4
NEK1-203ENST00000507142 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■■■■□ 20.3
NEK1-203ENST00000507142 NEUROD2Q15784 382 aa12.55□□□□□ -0.4
NEK1-203ENST00000507142 DMRT2Q9Y5R5 561 aa12.55□□□□□ -0.4
NEK1-203ENST00000507142 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
NEK1-203ENST00000507142 EHBP1L1Q8N3D4 1523 aa12.54□□□□□ -0.4
NEK1-203ENST00000507142 L3MBTL2Q969R5 705 aa12.54□□□□□ -0.4
NEK1-203ENST00000507142 LTV1Q96GA3 475 aaPredicted RBP12.54□□□□□ -0.4
NEK1-203ENST00000507142 FANCAO15360 1455 aa12.54□□□□□ -0.4
NEK1-203ENST00000507142 SLC26A8Q96RN1 970 aa12.53□□□□□ -0.4
NEK1-203ENST00000507142 ADAMTS12P58397 1594 aa12.53□□□□□ -0.4
NEK1-203ENST00000507142 AMPHP49418 695 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms